RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PTPN22Q9Y2R2 807 aa29.49■■■□□ 2.31
HLA-C-209ENST00000495835 PHIPQ8WWQ0 1821 aa29.48■■■□□ 2.31
HLA-C-209ENST00000495835 METTL16Q86W50 562 aaKnown RBP29.48■■■□□ 2.31
HLA-C-209ENST00000495835 SLC45A1Q9Y2W3 748 aa29.48■■■□□ 2.31
HLA-C-209ENST00000495835 FLT1P17948 1338 aa29.47■■■□□ 2.31
HLA-C-209ENST00000495835 GNRH1P01148 92 aa29.47■■■□□ 2.31
HLA-C-209ENST00000495835 KIF22Q14807 665 aa29.47■■■□□ 2.31
HLA-C-209ENST00000495835 C17orf99Q6UX52 265 aa29.47■■■□□ 2.31
HLA-C-209ENST00000495835 MAGEB6Q8N7X4 407 aa29.47■■■□□ 2.31
HLA-C-209ENST00000495835 ANTXR1Q9H6X2 564 aa29.47■■■□□ 2.31
HLA-C-209ENST00000495835 HTTP42858 3142 aa29.47■■■□□ 2.31
HLA-C-209ENST00000495835 APBB1O00213 710 aa29.46■■■□□ 2.31
HLA-C-209ENST00000495835 CAP2P40123 477 aa29.46■■■□□ 2.31
HLA-C-209ENST00000495835 GPAT2Q6NUI2 795 aa29.46■■■□□ 2.31
HLA-C-209ENST00000495835 MAPKAPK5Q8IW41 473 aa29.46■■■□□ 2.31
HLA-C-209ENST00000495835 PTPRFP10586 1907 aa29.45■■■□□ 2.31
HLA-C-209ENST00000495835 SLURP2P0DP57 97 aa29.45■■■□□ 2.31
HLA-C-209ENST00000495835 PARK7Q99497 189 aaKnown RBP29.45■■■□□ 2.31
HLA-C-209ENST00000495835 GINM1Q9NU53 330 aa29.45■■■□□ 2.31
HLA-C-209ENST00000495835 NDUFB9Q9Y6M9 179 aa29.45■■■□□ 2.31
HLA-C-209ENST00000495835 DYNLL1P63167 89 aaKnown RBP29.44■■■□□ 2.3
HLA-C-209ENST00000495835 LACTBP83111 547 aaPredicted RBP29.44■■■□□ 2.3
HLA-C-209ENST00000495835 LRRCC1Q9C099 1032 aa29.44■■■□□ 2.3
HLA-C-209ENST00000495835 ATAD5Q96QE3 1844 aa29.43■■■□□ 2.3
HLA-C-209ENST00000495835 HLA-DOAP06340 250 aa29.43■■■□□ 2.3
HLA-C-209ENST00000495835 ATP5JP18859 108 aa29.43■■■□□ 2.3
HLA-C-209ENST00000495835 SIPA1L1O43166 1804 aa29.43■■■□□ 2.3
HLA-C-209ENST00000495835 ADGRA2Q96PE1 1338 aa29.43■■■□□ 2.3
HLA-C-209ENST00000495835 FAM196BA6NMK8 535 aa29.42■■■□□ 2.3
HLA-C-209ENST00000495835 PRMT2P55345 433 aa29.42■■■□□ 2.3
HLA-C-209ENST00000495835 USP17L5A8MUK1 530 aa29.41■■■□□ 2.3
HLA-C-209ENST00000495835 MIGA1Q8NAN2 632 aa29.41■■■□□ 2.3
HLA-C-209ENST00000495835 PROCA1Q8NCQ7 364 aaPredicted RBP29.41■■■□□ 2.3
HLA-C-209ENST00000495835 TRIM34Q9BYJ4 488 aa29.41■■■□□ 2.3
HLA-C-209ENST00000495835 AS3MTQ9HBK9 375 aa29.41■■■□□ 2.3
HLA-C-209ENST00000495835 PALD1Q9ULE6 856 aa29.41■■■□□ 2.3
HLA-C-209ENST00000495835 MYH1P12882 1939 aa29.41■■■□□ 2.3
HLA-C-209ENST00000495835 ASNSP08243 561 aa29.4■■■□□ 2.3
HLA-C-209ENST00000495835 SOX10P56693 466 aa29.4■■■□□ 2.3
HLA-C-209ENST00000495835 CAP1Q01518 475 aa29.4■■■□□ 2.3
HLA-C-209ENST00000495835 SLC9C2Q5TAH2 1124 aa29.4■■■□□ 2.3
HLA-C-209ENST00000495835 CRACR2BQ8N4Y2 399 aaPredicted RBP29.4■■■□□ 2.3
HLA-C-209ENST00000495835 ZNF280CQ8ND82 737 aa29.4■■■□□ 2.3
HLA-C-209ENST00000495835 TRIM75PA6NK02 468 aa29.39■■■□□ 2.3
HLA-C-209ENST00000495835 USP5P45974 858 aa29.39■■■□□ 2.3
HLA-C-209ENST00000495835 GADL1Q6ZQY3 521 aa29.39■■■□□ 2.3
HLA-C-209ENST00000495835 RIOK1Q9BRS2 568 aaKnown RBP29.39■■■□□ 2.3
HLA-C-209ENST00000495835 DCTPP1Q9H773 170 aa29.39■■■□□ 2.3
HLA-C-209ENST00000495835 CENPFP49454 3210 aa29.39■■■□□ 2.29
HLA-C-209ENST00000495835 GOLIM4O00461 696 aa29.38■■■□□ 2.29
HLA-C-209ENST00000495835 PDE6AP16499 860 aa29.38■■■□□ 2.29
HLA-C-209ENST00000495835 ARMC5Q96C12 935 aa29.38■■■□□ 2.29
HLA-C-209ENST00000495835 DNAJC2Q99543 621 aaKnown RBP29.38■■■□□ 2.29
HLA-C-209ENST00000495835 WDR18Q9BV38 432 aa29.38■■■□□ 2.29
HLA-C-209ENST00000495835 CPA4Q9UI42 421 aa29.38■■■□□ 2.29
HLA-C-209ENST00000495835 AGTPBP1Q9UPW5 1226 aa29.38■■■□□ 2.29
HLA-C-209ENST00000495835 MAGEB6P1A0A0J9YX57 407 aa29.37■■■□□ 2.29
HLA-C-209ENST00000495835 BCRP11274 1271 aa29.37■■■□□ 2.29
HLA-C-209ENST00000495835 SPP2Q13103 211 aa29.37■■■□□ 2.29
HLA-C-209ENST00000495835 RRP1BQ14684 758 aaKnown RBP29.37■■■□□ 2.29
HLA-C-209ENST00000495835 SH3D19Q5HYK7 790 aa29.37■■■□□ 2.29
HLA-C-209ENST00000495835 TTC6Q86TZ1 520 aa29.37■■■□□ 2.29
HLA-C-209ENST00000495835 EHD4Q9H223 541 aa29.37■■■□□ 2.29
HLA-C-209ENST00000495835 PAG1Q9NWQ8 432 aa29.37■■■□□ 2.29
HLA-C-209ENST00000495835 HOXD10P28358 340 aa29.36■■■□□ 2.29
HLA-C-209ENST00000495835 NBPF11Q86T75 865 aa29.36■■■□□ 2.29
HLA-C-209ENST00000495835 HAUS7Q99871 368 aa29.36■■■□□ 2.29
HLA-C-209ENST00000495835 DNAJC18Q9H819 358 aa29.36■■■□□ 2.29
HLA-C-209ENST00000495835 TNRC18O15417 2968 aaPredicted RBP29.35■■■□□ 2.29
HLA-C-209ENST00000495835 PABPC4Q13310 644 aaKnown RBP eCLIP29.35■■■□□ 2.29
HLA-C-209ENST00000495835 CRNKL1Q9BZJ0 848 aaKnown RBP29.35■■■□□ 2.29
HLA-C-209ENST00000495835 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.35■■■□□ 2.29
HLA-C-209ENST00000495835 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.35■■■□□ 2.29
HLA-C-209ENST00000495835 SAP30BPQ9UHR5 308 aaKnown RBP29.35■■■□□ 2.29
HLA-C-209ENST00000495835 PNMA3Q9UL41 463 aa29.35■■■□□ 2.29
HLA-C-209ENST00000495835 TCRBV5S4A2TA0A5A2 114 aa29.34■■■□□ 2.29
HLA-C-209ENST00000495835 CYP2C8P10632 490 aa29.34■■■□□ 2.29
HLA-C-209ENST00000495835 BOLA2Q9H3K6 86 aa29.34■■■□□ 2.29
HLA-C-209ENST00000495835 SERPINB13Q9UIV8 391 aa29.34■■■□□ 2.29
HLA-C-209ENST00000495835 ZNF532Q9HCE3 1301 aa29.34■■■□□ 2.29
HLA-C-209ENST00000495835 LOC285556D6RIA3 1793 aa29.34■■■□□ 2.29
HLA-C-209ENST00000495835 PSMC4P43686 418 aa29.33■■■□□ 2.29
HLA-C-209ENST00000495835 TATDN1Q6P1N9 297 aa29.33■■■□□ 2.29
HLA-C-209ENST00000495835 CCDC84Q86UT8 332 aaPredicted RBP29.33■■■□□ 2.29
HLA-C-209ENST00000495835 ARHGAP39Q9C0H5 1083 aa29.33■■■□□ 2.29
HLA-C-209ENST00000495835 TAOK2Q9UL54 1235 aa29.33■■■□□ 2.29
HLA-C-209ENST00000495835 C19orf81C9J6K1 198 aa29.32■■■□□ 2.28
HLA-C-209ENST00000495835 RRP1P56182 461 aaKnown RBP29.32■■■□□ 2.28
HLA-C-209ENST00000495835 PTCH2Q9Y6C5 1203 aa29.32■■■□□ 2.28
HLA-C-209ENST00000495835 BACE1P56817 501 aa29.31■■■□□ 2.28
HLA-C-209ENST00000495835 SLC9C1Q4G0N8 1177 aa29.31■■■□□ 2.28
HLA-C-209ENST00000495835 SMCR8Q8TEV9 937 aaPredicted RBP29.31■■■□□ 2.28
HLA-C-209ENST00000495835 BCL11AQ9H165 835 aa29.31■■■□□ 2.28
HLA-C-209ENST00000495835 SRRDQ9UH36 339 aa29.31■■■□□ 2.28
HLA-C-209ENST00000495835 RBBP6Q7Z6E9 1792 aaKnown RBP29.31■■■□□ 2.28
HLA-C-209ENST00000495835 ADD2P35612 726 aa29.3■■■□□ 2.28
HLA-C-209ENST00000495835 ZSCAN25Q6NSZ9 544 aa29.3■■■□□ 2.28
HLA-C-209ENST00000495835 TRIM47Q96LD4 638 aa29.3■■■□□ 2.28
HLA-C-209ENST00000495835 ECHDC1Q9NTX5 307 aa29.3■■■□□ 2.28
HLA-C-209ENST00000495835 ZBTB21Q9ULJ3 1066 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms