RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 RFX5P48382 616 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 KRT76Q01546 638 aa12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 CC2D2BQ6DHV5 1058 aa12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 LDHAL6AQ6ZMR3 332 aa12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 SP8Q8IXZ3 490 aa12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 RNF217Q8TC41 542 aa12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 ZNF594Q96JF6 807 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 ATP6V0A2Q9Y487 856 aa12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 GOLGB1Q14789 3259 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP3-211ENST00000495663 HMMRO75330 724 aa12.53□□□□□ -0.4
RAB11FIP3-211ENST00000495663 PTPN12Q05209 780 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP3-211ENST00000495663 GPR162Q16538 588 aa12.53□□□□□ -0.4
RAB11FIP3-211ENST00000495663 CCDC93Q567U6 631 aa12.53□□□□□ -0.4
RAB11FIP3-211ENST00000495663 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
RAB11FIP3-211ENST00000495663 CNTNAP3BQ96NU0 1288 aa12.53□□□□□ -0.4
RAB11FIP3-211ENST00000495663 CNTNAP3Q9BZ76 1288 aa12.53□□□□□ -0.4
RAB11FIP3-211ENST00000495663 CNNM1Q9NRU3 951 aa12.53□□□□□ -0.4
RAB11FIP3-211ENST00000495663 LTBP1Q14766 1721 aa12.52□□□□□ -0.41
RAB11FIP3-211ENST00000495663 ZBBXA8MT70 800 aa12.52□□□□□ -0.41
RAB11FIP3-211ENST00000495663 KDF1Q8NAX2 398 aaPredicted RBP12.52□□□□□ -0.41
RAB11FIP3-211ENST00000495663 KLHDC4Q8TBB5 520 aa12.52□□□□□ -0.41
RAB11FIP3-211ENST00000495663 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
RAB11FIP3-211ENST00000495663 UTRNP46939 3433 aa12.52□□□□□ -0.41
RAB11FIP3-211ENST00000495663 CCDC88AQ3V6T2 1871 aa12.51□□□□□ -0.41
RAB11FIP3-211ENST00000495663 CDC14CA4D256 554 aa12.51□□□□□ -0.41
RAB11FIP3-211ENST00000495663 SLC35F4A4IF30 521 aa12.51□□□□□ -0.41
RAB11FIP3-211ENST00000495663 EYA2O00167 538 aa12.51□□□□□ -0.41
RAB11FIP3-211ENST00000495663 YBX3P16989 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
RAB11FIP3-211ENST00000495663 FOXD4L5Q5VV16 416 aaPredicted RBP12.51□□□□□ -0.41
RAB11FIP3-211ENST00000495663 RTKN2Q8IZC4 609 aa12.51□□□□□ -0.41
RAB11FIP3-211ENST00000495663 SIL1Q9H173 461 aa12.51□□□□□ -0.41
RAB11FIP3-211ENST00000495663 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
RAB11FIP3-211ENST00000495663 PA2G4Q9UQ80 394 aaKnown RBP12.51□□□□□ -0.41
RAB11FIP3-211ENST00000495663 GRIN3BO60391 1043 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 CIAO1O76071 339 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 PTGIRP43119 386 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 CHRNDQ07001 517 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 LRRC24Q50LG9 513 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 OLFM4Q6UX06 510 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 SIRT2Q8IXJ6 389 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 PUS3Q9BZE2 481 aaKnown RBP12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 ANKIB1Q9P2G1 1089 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 NSFL1CQ9UNZ2 370 aaKnown RBP12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 RIPOR2Q9Y4F9 1068 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 MROH5Q6ZUA9 1318 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 SNED1Q8TER0 1413 aa12.5□□□□□ -0.41
RAB11FIP3-211ENST00000495663 SBF1O95248 1867 aa12.49□□□□□ -0.41
RAB11FIP3-211ENST00000495663 XDHP47989 1333 aa12.49□□□□□ -0.41
RAB11FIP3-211ENST00000495663 SURF6O75683 361 aaKnown RBP12.49□□□□□ -0.41
RAB11FIP3-211ENST00000495663 IL15P40933 162 aaPredicted RBP12.49□□□□□ -0.41
RAB11FIP3-211ENST00000495663 G3BP1Q13283 466 aaKnown RBP eCLIP12.49□□□□□ -0.41
RAB11FIP3-211ENST00000495663 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
RAB11FIP3-211ENST00000495663 ARHGAP27Q6ZUM4 889 aa12.49□□□□□ -0.41
RAB11FIP3-211ENST00000495663 SLC51AQ86UW1 340 aa12.49□□□□□ -0.41
RAB11FIP3-211ENST00000495663 COL25A1Q9BXS0 654 aaPredicted RBP12.49□□□□□ -0.41
RAB11FIP3-211ENST00000495663 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
RAB11FIP3-211ENST00000495663 DUOX1Q9NRD9 1551 aa12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 GPSM2P81274 684 aa12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 FKBP4Q02790 459 aaKnown RBP eCLIP12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 OS9Q13438 667 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 HSP90AB4PQ58FF6 505 aa12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 METTL24Q5JXM2 366 aa12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 ATG9AQ7Z3C6 839 aa12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 VWA5B2Q8N398 1253 aa12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 SUPT20HQ8NEM7 779 aa12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 PSMD1Q99460 953 aa12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 TAOK3Q9H2K8 898 aa12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 NOP58Q9Y2X3 529 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 DICER1Q9UPY3 1922 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-211ENST00000495663 LTBP3Q9NS15 1303 aa12.47□□□□□ -0.41
RAB11FIP3-211ENST00000495663 TAF5LO75529 589 aa12.47□□□□□ -0.41
RAB11FIP3-211ENST00000495663 ATP2B4P23634 1241 aa12.47□□□□□ -0.41
RAB11FIP3-211ENST00000495663 KCNJ4P48050 445 aa12.47□□□□□ -0.41
RAB11FIP3-211ENST00000495663 RNFT1Q5M7Z0 435 aa12.47□□□□□ -0.41
RAB11FIP3-211ENST00000495663 RTFDC1Q9BY42 306 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP3-211ENST00000495663 CEP126Q9P2H0 1117 aa12.47□□□□□ -0.41
RAB11FIP3-211ENST00000495663 GGA1Q9UJY5 639 aa12.47□□□□□ -0.41
RAB11FIP3-211ENST00000495663 EXOC6BQ9Y2D4 811 aa12.47□□□□□ -0.41
RAB11FIP3-211ENST00000495663 LEMD3Q9Y2U8 911 aa12.47□□□□□ -0.41
RAB11FIP3-211ENST00000495663 ARAP2Q8WZ64 1704 aa12.46□□□□□ -0.41
RAB11FIP3-211ENST00000495663 NFKBIEO00221 500 aa12.46□□□□□ -0.41
RAB11FIP3-211ENST00000495663 UFL1O94874 794 aa12.46□□□□□ -0.41
RAB11FIP3-211ENST00000495663 PDE8BO95263 885 aa12.46□□□□□ -0.41
RAB11FIP3-211ENST00000495663 HDAC1Q13547 482 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP3-211ENST00000495663 ERC1Q8IUD2 1116 aa12.46□□□□□ -0.41
RAB11FIP3-211ENST00000495663 TBC1D16Q8TBP0 767 aa12.46□□□□□ -0.41
RAB11FIP3-211ENST00000495663 EYA3Q99504 573 aa12.46□□□□□ -0.41
RAB11FIP3-211ENST00000495663 RWDD1Q9H446 243 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP3-211ENST00000495663 CHD4Q14839 1912 aa12.45□□□□□ -0.42
RAB11FIP3-211ENST00000495663 ZNF804BA4D1E1 1349 aa12.45□□□□□ -0.42
RAB11FIP3-211ENST00000495663 RAB11FIP3O75154 756 aa12.45□□□□□ -0.42
RAB11FIP3-211ENST00000495663 RASSF7Q02833 373 aa12.45□□□□□ -0.42
RAB11FIP3-211ENST00000495663 UBE4AQ14139 1066 aa12.45□□□□□ -0.42
RAB11FIP3-211ENST00000495663 ERICH6BQ5W0A0 696 aa12.45□□□□□ -0.42
RAB11FIP3-211ENST00000495663 VGLL2Q8N8G2 317 aa12.45□□□□□ -0.42
RAB11FIP3-211ENST00000495663 NANOS1Q8WY41 292 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms