RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 USP17L21D6R901 530 aa20.43■□□□□ 0.86
HDAC6-235ENST00000495515 MAP3K9P80192 1104 aa20.43■□□□□ 0.86
HDAC6-235ENST00000495515 SBK1Q52WX2 424 aa20.43■□□□□ 0.86
HDAC6-235ENST00000495515 MOB2Q70IA6 237 aa20.43■□□□□ 0.86
HDAC6-235ENST00000495515 ZNF589Q86UQ0 364 aaPredicted RBP20.43■□□□□ 0.86
HDAC6-235ENST00000495515 WRNIP1Q96S55 665 aa20.43■□□□□ 0.86
HDAC6-235ENST00000495515 CSADQ9Y600 493 aa20.43■□□□□ 0.86
HDAC6-235ENST00000495515 HSPD1P10809 573 aaKnown RBP20.42■□□□□ 0.86
HDAC6-235ENST00000495515 SLC4A8Q2Y0W8 1093 aa20.42■□□□□ 0.86
HDAC6-235ENST00000495515 DEFB115Q30KQ5 88 aa20.42■□□□□ 0.86
HDAC6-235ENST00000495515 LDLRAD1Q5T700 205 aa20.42■□□□□ 0.86
HDAC6-235ENST00000495515 C12orf60Q5U649 245 aa20.42■□□□□ 0.86
HDAC6-235ENST00000495515 CTR9Q6PD62 1173 aa20.42■□□□□ 0.86
HDAC6-235ENST00000495515 METTL16Q86W50 562 aaKnown RBP20.42■□□□□ 0.86
HDAC6-235ENST00000495515 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.42■□□□□ 0.86
HDAC6-235ENST00000495515 ZNF112Q9UJU3 913 aa20.42■□□□□ 0.86
HDAC6-235ENST00000495515 FZD1Q9UP38 647 aa20.42■□□□□ 0.86
HDAC6-235ENST00000495515 AK9Q5TCS8 1911 aa20.42■□□□□ 0.86
HDAC6-235ENST00000495515 RASSF10A6NK89 507 aa20.41■□□□□ 0.86
HDAC6-235ENST00000495515 PLCD1P51178 756 aa20.41■□□□□ 0.86
HDAC6-235ENST00000495515 ALX1Q15699 326 aa20.41■□□□□ 0.86
HDAC6-235ENST00000495515 RGMBQ6NW40 437 aa20.41■□□□□ 0.86
HDAC6-235ENST00000495515 JMYQ8N9B5 988 aa20.41■□□□□ 0.86
HDAC6-235ENST00000495515 EPB41L4AQ9HCS5 686 aaPredicted RBP20.41■□□□□ 0.86
HDAC6-235ENST00000495515 SWAP70Q9UH65 585 aa20.41■□□□□ 0.86
HDAC6-235ENST00000495515 MINDY4BA8MYZ0 360 aa20.4■□□□□ 0.86
HDAC6-235ENST00000495515 SGSM2O43147 1006 aa20.4■□□□□ 0.86
HDAC6-235ENST00000495515 SLC3A2P08195 630 aaKnown RBP20.4■□□□□ 0.86
HDAC6-235ENST00000495515 VPS53Q5VIR6 699 aa20.4■□□□□ 0.86
HDAC6-235ENST00000495515 FOCADQ5VW36 1801 aa20.4■□□□□ 0.86
HDAC6-235ENST00000495515 KIAA1211Q6ZU35 1233 aa20.4■□□□□ 0.86
HDAC6-235ENST00000495515 PAXIP1Q6ZW49 1069 aaPredicted RBP20.4■□□□□ 0.86
HDAC6-235ENST00000495515 CCDC102AQ96A19 550 aa20.4■□□□□ 0.86
HDAC6-235ENST00000495515 SLC10A4Q96EP9 437 aa20.4■□□□□ 0.86
HDAC6-235ENST00000495515 DSCC1Q9BVC3 393 aa20.4■□□□□ 0.86
HDAC6-235ENST00000495515 ZMYM6O95789 1325 aa20.39■□□□□ 0.85
HDAC6-235ENST00000495515 CTNND1O60716 968 aaKnown RBP20.39■□□□□ 0.85
HDAC6-235ENST00000495515 CYP2D6P10635 497 aa20.39■□□□□ 0.85
HDAC6-235ENST00000495515 ECE1P42892 770 aa20.39■□□□□ 0.85
HDAC6-235ENST00000495515 ZNF157P51786 506 aaPredicted RBP20.39■□□□□ 0.85
HDAC6-235ENST00000495515 ZNF287Q9HBT7 754 aa20.39■□□□□ 0.85
HDAC6-235ENST00000495515 FAM196BA6NMK8 535 aa20.38■□□□□ 0.85
HDAC6-235ENST00000495515 PHF20L1A8MW92 1017 aa20.38■□□□□ 0.85
HDAC6-235ENST00000495515 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.38■□□□□ 0.85
HDAC6-235ENST00000495515 ESYT1Q9BSJ8 1104 aa20.38■□□□□ 0.85
HDAC6-235ENST00000495515 PICK1Q9NRD5 415 aa20.38■□□□□ 0.85
HDAC6-235ENST00000495515 CTNNA3Q9UI47 895 aa20.38■□□□□ 0.85
HDAC6-235ENST00000495515 NAV1Q8NEY1 1877 aa20.37■□□□□ 0.85
HDAC6-235ENST00000495515 CDK5RAP2Q96SN8 1893 aa20.37■□□□□ 0.85
HDAC6-235ENST00000495515 CYP2D7A0A087X1C5 515 aa20.37■□□□□ 0.85
HDAC6-235ENST00000495515 FGAP02671 866 aa20.37■□□□□ 0.85
HDAC6-235ENST00000495515 INPP5BP32019 993 aa20.37■□□□□ 0.85
HDAC6-235ENST00000495515 GABPAQ06546 454 aa20.37■□□□□ 0.85
HDAC6-235ENST00000495515 VGLL4Q14135 290 aa20.37■□□□□ 0.85
HDAC6-235ENST00000495515 NOL9Q5SY16 702 aaKnown RBP20.37■□□□□ 0.85
HDAC6-235ENST00000495515 ZKSCAN4Q969J2 545 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-235ENST00000495515 GINM1Q9NU53 330 aa20.37■□□□□ 0.85
HDAC6-235ENST00000495515 FOXP2O15409 715 aa20.36■□□□□ 0.85
HDAC6-235ENST00000495515 CAP2P40123 477 aa20.36■□□□□ 0.85
HDAC6-235ENST00000495515 PPARAQ07869 468 aa20.36■□□□□ 0.85
HDAC6-235ENST00000495515 TATDN1Q6P1N9 297 aa20.36■□□□□ 0.85
HDAC6-235ENST00000495515 SCYL3Q8IZE3 742 aa20.36■□□□□ 0.85
HDAC6-235ENST00000495515 DNAJC18Q9H819 358 aa20.36■□□□□ 0.85
HDAC6-235ENST00000495515 SLURP2P0DP57 97 aa20.35■□□□□ 0.85
HDAC6-235ENST00000495515 PDE4BQ07343 736 aa20.35■□□□□ 0.85
HDAC6-235ENST00000495515 CERKLQ49MI3 558 aaPredicted RBP20.35■□□□□ 0.85
HDAC6-235ENST00000495515 C16orf86Q6ZW13 317 aa20.35■□□□□ 0.85
HDAC6-235ENST00000495515 DYNLL2Q96FJ2 89 aa20.35■□□□□ 0.85
HDAC6-235ENST00000495515 CLMNQ96JQ2 1002 aa20.35■□□□□ 0.85
HDAC6-235ENST00000495515 CAPNS2Q96L46 248 aa20.35■□□□□ 0.85
HDAC6-235ENST00000495515 IL25Q9H293 177 aa20.35■□□□□ 0.85
HDAC6-235ENST00000495515 ELP3Q9H9T3 547 aa20.35■□□□□ 0.85
HDAC6-235ENST00000495515 MKNK2Q9HBH9 465 aa20.35■□□□□ 0.85
HDAC6-235ENST00000495515 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.35■□□□□ 0.85
HDAC6-235ENST00000495515 DDX60LQ5H9U9 1706 aaKnown RBP20.35■□□□□ 0.85
HDAC6-235ENST00000495515 MYH1P12882 1939 aa20.35■□□□□ 0.85
HDAC6-235ENST00000495515 ROBO3Q96MS0 1386 aa20.34■□□□□ 0.85
HDAC6-235ENST00000495515 ASNSP08243 561 aa20.34■□□□□ 0.85
HDAC6-235ENST00000495515 CDK8P49336 464 aa20.34■□□□□ 0.85
HDAC6-235ENST00000495515 CYP4F22Q6NT55 531 aa20.34■□□□□ 0.85
HDAC6-235ENST00000495515 ERO1BQ86YB8 467 aa20.34■□□□□ 0.85
HDAC6-235ENST00000495515 CCDC17Q96LX7 622 aa20.34■□□□□ 0.85
HDAC6-235ENST00000495515 CABP5Q9NP86 173 aa20.34■□□□□ 0.85
HDAC6-235ENST00000495515 ANAPC4Q9UJX5 808 aa20.34■□□□□ 0.85
HDAC6-235ENST00000495515 SNCAIPQ9Y6H5 919 aa20.34■□□□□ 0.85
HDAC6-235ENST00000495515 SPDYE5A6NIY4 337 aa20.33■□□□□ 0.85
HDAC6-235ENST00000495515 ZNF213O14771 459 aa20.33■□□□□ 0.85
HDAC6-235ENST00000495515 SLC10A3P09131 477 aa20.33■□□□□ 0.85
HDAC6-235ENST00000495515 ZBTB48P10074 688 aaPredicted RBP20.33■□□□□ 0.85
HDAC6-235ENST00000495515 SHMT1P34896 483 aa20.33■□□□□ 0.85
HDAC6-235ENST00000495515 NOGQ13253 232 aa20.33■□□□□ 0.85
HDAC6-235ENST00000495515 GRM1Q13255 1194 aa20.33■□□□□ 0.85
HDAC6-235ENST00000495515 IMMTQ16891 758 aaKnown RBP20.33■□□□□ 0.85
HDAC6-235ENST00000495515 IFFO2Q5TF58 517 aa20.33■□□□□ 0.85
HDAC6-235ENST00000495515 RASAL3Q86YV0 1011 aa20.33■□□□□ 0.85
HDAC6-235ENST00000495515 ANO2Q9NQ90 1003 aa20.33■□□□□ 0.85
HDAC6-235ENST00000495515 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
HDAC6-235ENST00000495515 EIF5BO60841 1220 aaKnown RBP20.32■□□□□ 0.84
HDAC6-235ENST00000495515 EVX2Q03828 476 aa20.32■□□□□ 0.84
HDAC6-235ENST00000495515 PPATQ06203 517 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms