RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SMIM22K7EJ46 135 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 ZSCAN22P10073 491 aaPredicted RBP7.99□□□□□ -1.13
MSH5-217ENST00000494458 FDPSP14324 419 aaKnown RBP7.99□□□□□ -1.13
MSH5-217ENST00000494458 PDCP20941 246 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 PTMSP20962 102 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 TDO2P48775 406 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 HMGN5P82970 282 aaKnown RBP7.99□□□□□ -1.13
MSH5-217ENST00000494458 PPP2R5BQ15173 497 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 SOGA3Q5TF21 947 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 APOA5Q6Q788 366 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 NOL8Q76FK4 1167 aaKnown RBP7.99□□□□□ -1.13
MSH5-217ENST00000494458 CHST3Q7LGC8 479 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 METTL16Q86W50 562 aaKnown RBP7.99□□□□□ -1.13
MSH5-217ENST00000494458 TMEM87AQ8NBN3 555 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 SH3RF3Q8TEJ3 882 aaPredicted RBP7.99□□□□□ -1.13
MSH5-217ENST00000494458 ZDHHC15Q96MV8 337 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 GBP4Q96PP9 640 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 LMBRD1Q9NUN5 540 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 DAGLAQ9Y4D2 1042 aa7.99□□□□□ -1.13
MSH5-217ENST00000494458 DDX60LQ5H9U9 1706 aaKnown RBP7.98□□□□□ -1.13
MSH5-217ENST00000494458 DDX11L8A8MPP1 907 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 YDJCA8MPS7 323 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 RIMBP2O15034 1052 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 MAP3K13O43283 966 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 DHX16O60231 1041 aaKnown RBP7.98□□□□□ -1.13
MSH5-217ENST00000494458 KDM4AO75164 1064 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 WDHD1O75717 1129 aaPredicted RBP7.98□□□□□ -1.13
MSH5-217ENST00000494458 VIL1P09327 827 aaKnown RBP7.98□□□□□ -1.13
MSH5-217ENST00000494458 BTDP43251 543 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 MMP14P50281 582 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 GABPAQ06546 454 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 DOK7Q18PE1 504 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 CCDC93Q567U6 631 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 SPNS2Q8IVW8 549 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 ESR2Q92731 530 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 MAP3K14Q99558 947 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 IDI2Q9BXS1 227 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 SENP2Q9HC62 589 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 KCNQ5Q9NR82 932 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 PIM2Q9P1W9 311 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 JAG2Q9Y219 1238 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 LTBP3Q9NS15 1303 aa7.98□□□□□ -1.13
MSH5-217ENST00000494458 CYP2D7A0A087X1C5 515 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 KLF18A0A0U1RQI7 1052 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 USP17L3A6NCW0 530 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 USP17L4A6NCW7 530 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 C21orf2O43822 256 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 ECE2O60344 883 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 JAK2O60674 1132 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 F13A1P00488 732 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 USP17L8P0C7I0 530 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 FUT2Q10981 343 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 TROAPQ12815 778 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 SKOR2Q2VWA4 1001 aaPredicted RBP7.97□□□□□ -1.13
MSH5-217ENST00000494458 LARP1BQ659C4 914 aaKnown RBP7.97□□□□□ -1.13
MSH5-217ENST00000494458 RCSD1Q6JBY9 416 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 C16orf86Q6ZW13 317 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 USP17L1Q7RTZ2 530 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 DGKHQ86XP1 1220 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 MTMR14Q8NCE2 650 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 SERPINA10Q9UK55 444 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 MYH2Q9UKX2 1941 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 FLT1P17948 1338 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 MYO3BQ8WXR4 1341 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 STK36Q9NRP7 1315 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 SCN9AQ15858 1988 aa7.97□□□□□ -1.13
MSH5-217ENST00000494458 PSME4Q14997 1843 aa7.96□□□□□ -1.13
MSH5-217ENST00000494458 BRCA1P38398 1863 aaKnown RBP7.96□□□□□ -1.13
MSH5-217ENST00000494458 COL4A5P29400 1685 aa7.96□□□□□ -1.13
MSH5-217ENST00000494458 TTLL13PA6NNM8 815 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 MINDY4BA8MYZ0 360 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 IFIT3O14879 490 aaKnown RBP7.96□□□□□ -1.14
MSH5-217ENST00000494458 ZBTB7AO95365 584 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 SLC3A2P08195 630 aaKnown RBP7.96□□□□□ -1.14
MSH5-217ENST00000494458 CYP2D6P10635 497 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 IFNAR1P17181 557 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 POLD1P28340 1107 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 CDC27P30260 824 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 ADD1P35611 737 aaKnown RBP7.96□□□□□ -1.14
MSH5-217ENST00000494458 PLCD1P51178 756 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 PDE4BQ07343 736 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 SART3Q15020 963 aaKnown RBP7.96□□□□□ -1.14
MSH5-217ENST00000494458 CCDC178Q5BJE1 867 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 TMEM67Q5HYA8 995 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 CDC42EP5Q6NZY7 148 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 NBPF11Q86T75 865 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 KLHL34Q8N239 644 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 ENAHQ8N8S7 591 aaPredicted RBP7.96□□□□□ -1.14
MSH5-217ENST00000494458 TGFBRAP1Q8WUH2 860 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 TEKT1Q969V4 418 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 ZBED3Q96IU2 234 aaPredicted RBP7.96□□□□□ -1.14
MSH5-217ENST00000494458 ZSCAN10Q96SZ4 725 aaPredicted RBP7.96□□□□□ -1.14
MSH5-217ENST00000494458 NOL10Q9BSC4 688 aaKnown RBP7.96□□□□□ -1.14
MSH5-217ENST00000494458 EHD4Q9H223 541 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 DBNDD1Q9H9R9 158 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 IL17RBQ9NRM6 502 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 MCM9Q9NXL9 1143 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 TTF2Q9UNY4 1162 aaKnown RBP7.96□□□□□ -1.14
MSH5-217ENST00000494458 ATP6V1DQ9Y5K8 247 aa7.96□□□□□ -1.14
MSH5-217ENST00000494458 FOCADQ5VW36 1801 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms