RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 METTL24Q5JXM2 366 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 USPL1Q5W0Q7 1092 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 AGBL1Q96MI9 1066 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.94□□□□□ -0.5
PRPF3-206ENST00000493553 NYXQ9GZU5 481 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 CTNNA3Q9UI47 895 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 SPEF2Q9C093 1822 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 TTLL8A6PVC2 850 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 ADH1AP07327 375 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 DEKP35659 375 aaKnown RBP11.93□□□□□ -0.5
PRPF3-206ENST00000493553 CREB3L3Q68CJ9 461 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 ACSBG1Q96GR2 724 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 CDC5LQ99459 802 aaKnown RBP11.93□□□□□ -0.5
PRPF3-206ENST00000493553 DNAJC2Q99543 621 aaKnown RBP11.93□□□□□ -0.5
PRPF3-206ENST00000493553 DSCC1Q9BVC3 393 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 DNMT3LQ9UJW3 386 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 TRPC5Q9UL62 973 aaPredicted RBP11.93□□□□□ -0.5
PRPF3-206ENST00000493553 RIPOR2Q9Y4F9 1068 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 ATP6V1DQ9Y5K8 247 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 RBM8AQ9Y5S9 174 aaKnown RBP11.93□□□□□ -0.5
PRPF3-206ENST00000493553 TJP1Q07157 1748 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 DOT1LQ8TEK3 1739 aa11.93□□□□□ -0.5
PRPF3-206ENST00000493553 RNF113AO15541 343 aaKnown RBP11.92□□□□□ -0.5
PRPF3-206ENST00000493553 TAF5LO75529 589 aa11.92□□□□□ -0.5
PRPF3-206ENST00000493553 ADD1P35611 737 aaKnown RBP11.92□□□□□ -0.5
PRPF3-206ENST00000493553 IGHMBP2P38935 993 aaKnown RBP11.92□□□□□ -0.5
PRPF3-206ENST00000493553 PUM3Q15397 648 aaKnown RBP11.92□□□□□ -0.5
PRPF3-206ENST00000493553 LRRC24Q50LG9 513 aa11.92□□□□□ -0.5
PRPF3-206ENST00000493553 PRPF40BQ6NWY9 871 aaKnown RBP11.92□□□□□ -0.5
PRPF3-206ENST00000493553 RUFY3Q7L099 469 aa11.92□□□□□ -0.5
PRPF3-206ENST00000493553 SLC16A10Q8TF71 515 aa11.92□□□□□ -0.5
PRPF3-206ENST00000493553 LPIN2Q92539 896 aa11.92□□□□□ -0.5
PRPF3-206ENST00000493553 TNPO1Q92973 898 aaKnown RBP11.92□□□□□ -0.5
PRPF3-206ENST00000493553 MPHOSPH8Q99549 860 aa11.92□□□□□ -0.5
PRPF3-206ENST00000493553 CYLDQ9NQC7 956 aa11.92□□□□□ -0.5
PRPF3-206ENST00000493553 PDRG1Q9NUG6 133 aa11.92□□□□□ -0.5
PRPF3-206ENST00000493553 PALD1Q9ULE6 856 aa11.92□□□□□ -0.5
PRPF3-206ENST00000493553 NIP7Q9Y221 180 aaKnown RBP eCLIP11.92□□□□□ -0.5
PRPF3-206ENST00000493553 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.91□□□□□ -0.5
PRPF3-206ENST00000493553 WDR33Q9C0J8 1336 aaKnown RBP11.91□□□□□ -0.5
PRPF3-206ENST00000493553 RREB1Q92766 1687 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 H3BM21 787 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 SLC27A2O14975 620 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 IGSF3O75054 1194 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 RPS6KA4O75676 772 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 PDE8BO95263 885 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 SLC5A1P13866 664 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 CASTP20810 708 aaKnown RBP11.91□□□□□ -0.5
PRPF3-206ENST00000493553 PDCP20941 246 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 TIMM10P62072 90 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 RELBQ01201 579 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 ITPK1Q13572 414 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 ZMYM1Q5SVZ6 1142 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 TMED8Q6PL24 325 aaPredicted RBP11.91□□□□□ -0.5
PRPF3-206ENST00000493553 BLOC1S2Q6QNY1 142 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 XAGE2Q96GT9 111 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 JAKMIP1Q96N16 626 aaKnown RBP11.91□□□□□ -0.5
PRPF3-206ENST00000493553 TTC14Q96N46 770 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 GDPD2Q9HCC8 539 aa11.91□□□□□ -0.5
PRPF3-206ENST00000493553 A0A0D9SFI3 127 aa11.9□□□□□ -0.5
PRPF3-206ENST00000493553 GOLIM4O00461 696 aa11.9□□□□□ -0.5
PRPF3-206ENST00000493553 CYP2E1P05181 493 aaPredicted RBP11.9□□□□□ -0.5
PRPF3-206ENST00000493553 ERVK-9P63128 1117 aa11.9□□□□□ -0.5
PRPF3-206ENST00000493553 PTH1RQ03431 593 aa11.9□□□□□ -0.5
PRPF3-206ENST00000493553 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.9□□□□□ -0.5
PRPF3-206ENST00000493553 L1TD1Q5T7N2 865 aaKnown RBP11.9□□□□□ -0.5
PRPF3-206ENST00000493553 LCE2CQ5TA81 110 aa11.9□□□□□ -0.5
PRPF3-206ENST00000493553 KDF1Q8NAX2 398 aaPredicted RBP11.9□□□□□ -0.5
PRPF3-206ENST00000493553 ZNF594Q96JF6 807 aaPredicted RBP11.9□□□□□ -0.5
PRPF3-206ENST00000493553 UPF3BQ9BZI7 483 aaKnown RBP11.9□□□□□ -0.5
PRPF3-206ENST00000493553 GREM2Q9H772 168 aa11.9□□□□□ -0.5
PRPF3-206ENST00000493553 TRAK2O60296 914 aa11.89□□□□□ -0.51
PRPF3-206ENST00000493553 PTGIRP43119 386 aa11.89□□□□□ -0.51
PRPF3-206ENST00000493553 SF3B3Q15393 1217 aaKnown RBP11.89□□□□□ -0.51
PRPF3-206ENST00000493553 SLC10A5Q5PT55 438 aa11.89□□□□□ -0.51
PRPF3-206ENST00000493553 SUSD4Q5VX71 490 aa11.89□□□□□ -0.51
PRPF3-206ENST00000493553 DDX46Q7L014 1031 aaKnown RBP11.89□□□□□ -0.51
PRPF3-206ENST00000493553 PUS3Q9BZE2 481 aaKnown RBP11.89□□□□□ -0.51
PRPF3-206ENST00000493553 NARFQ9UHQ1 456 aa11.89□□□□□ -0.51
PRPF3-206ENST00000493553 KIF3AQ9Y496 699 aa11.89□□□□□ -0.51
PRPF3-206ENST00000493553 ANKRD36CQ5JPF3 1778 aa11.89□□□□□ -0.51
PRPF3-206ENST00000493553 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
PRPF3-206ENST00000493553 NTSR2O95665 410 aa11.88□□□□□ -0.51
PRPF3-206ENST00000493553 GTF2E1P29083 439 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-206ENST00000493553 APPBP2Q92624 585 aa11.88□□□□□ -0.51
PRPF3-206ENST00000493553 IL25Q9H293 177 aa11.88□□□□□ -0.51
PRPF3-206ENST00000493553 GNL3LQ9NVN8 582 aaKnown RBP11.88□□□□□ -0.51
PRPF3-206ENST00000493553 SMC3Q9UQE7 1217 aa11.88□□□□□ -0.51
PRPF3-206ENST00000493553 RTCBQ9Y3I0 505 aaKnown RBP11.88□□□□□ -0.51
PRPF3-206ENST00000493553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-206ENST00000493553 RPAP1Q9BWH6 1393 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-206ENST00000493553 WIPF1O43516 503 aa11.87□□□□□ -0.51
PRPF3-206ENST00000493553 BAG4O95429 457 aaKnown RBP11.87□□□□□ -0.51
PRPF3-206ENST00000493553 RPS6KB1P23443 525 aa11.87□□□□□ -0.51
PRPF3-206ENST00000493553 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
PRPF3-206ENST00000493553 ABL2P42684 1182 aa11.87□□□□□ -0.51
PRPF3-206ENST00000493553 CTSOP43234 321 aaPredicted RBP11.87□□□□□ -0.51
PRPF3-206ENST00000493553 AK2P54819 239 aa11.87□□□□□ -0.51
PRPF3-206ENST00000493553 FKBP4Q02790 459 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms