RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 KIF23Q02241 960 aaPredicted RBP16.77■□□□□ 0.28
CCM2-217ENST00000492883 SPRYD7Q5W111 196 aa16.77■□□□□ 0.28
CCM2-217ENST00000492883 AMOTL1Q8IY63 956 aa16.77■□□□□ 0.28
CCM2-217ENST00000492883 COL2A1P02458 1487 aaPredicted RBP16.76■□□□□ 0.27
CCM2-217ENST00000492883 PHF20L1A8MW92 1017 aa16.76■□□□□ 0.27
CCM2-217ENST00000492883 SDSP20132 328 aa16.76■□□□□ 0.27
CCM2-217ENST00000492883 OPTNQ96CV9 577 aa16.76■□□□□ 0.27
CCM2-217ENST00000492883 WNK4Q96J92 1243 aa16.76■□□□□ 0.27
CCM2-217ENST00000492883 ZIC5Q96T25 663 aa16.76■□□□□ 0.27
CCM2-217ENST00000492883 PICK1Q9NRD5 415 aa16.76■□□□□ 0.27
CCM2-217ENST00000492883 HELLSQ9NRZ9 838 aa16.76■□□□□ 0.27
CCM2-217ENST00000492883 PATL2C9JE40 543 aaKnown RBP16.75■□□□□ 0.27
CCM2-217ENST00000492883 CTNND1O60716 968 aaKnown RBP16.75■□□□□ 0.27
CCM2-217ENST00000492883 GSPT1P15170 499 aaKnown RBP16.75■□□□□ 0.27
CCM2-217ENST00000492883 PLCD1P51178 756 aa16.75■□□□□ 0.27
CCM2-217ENST00000492883 MAP2K1Q02750 393 aaPredicted RBP16.75■□□□□ 0.27
CCM2-217ENST00000492883 FAM227BQ96M60 508 aa16.75■□□□□ 0.27
CCM2-217ENST00000492883 SERPINB13Q9UIV8 391 aa16.75■□□□□ 0.27
CCM2-217ENST00000492883 SNCAIPQ9Y6H5 919 aa16.75■□□□□ 0.27
CCM2-217ENST00000492883 DOCK2Q92608 1830 aa16.75■□□□□ 0.27
CCM2-217ENST00000492883 GSG1L2A8MUP6 293 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 USP17L12C9JPN9 530 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 USP17L21D6R901 530 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 HIP1O00291 1037 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 ZBTB48P10074 688 aaPredicted RBP16.74■□□□□ 0.27
CCM2-217ENST00000492883 NMIQ13287 307 aaPredicted RBP16.74■□□□□ 0.27
CCM2-217ENST00000492883 MCMDC2Q4G0Z9 681 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 NOL9Q5SY16 702 aaKnown RBP16.74■□□□□ 0.27
CCM2-217ENST00000492883 GIMAP6Q6P9H5 292 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 CCDC129Q6ZRS4 1044 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 METTL16Q86W50 562 aaKnown RBP16.74■□□□□ 0.27
CCM2-217ENST00000492883 ERO1BQ86YB8 467 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 SCYL3Q8IZE3 742 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 OTUD5Q96G74 571 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 NACAP1Q9BZK3 213 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 EHD4Q9H223 541 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
CCM2-217ENST00000492883 SPDYE5A6NIY4 337 aa16.73■□□□□ 0.27
CCM2-217ENST00000492883 CYP2D6P10635 497 aa16.73■□□□□ 0.27
CCM2-217ENST00000492883 CAP2P40123 477 aa16.73■□□□□ 0.27
CCM2-217ENST00000492883 TDO2P48775 406 aa16.73■□□□□ 0.27
CCM2-217ENST00000492883 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
CCM2-217ENST00000492883 REM2Q8IYK8 340 aaPredicted RBP16.73■□□□□ 0.27
CCM2-217ENST00000492883 MYO5AQ9Y4I1 1855 aaKnown RBP16.72■□□□□ 0.27
CCM2-217ENST00000492883 A0A0D9SFI3 127 aa16.72■□□□□ 0.27
CCM2-217ENST00000492883 MANSC4A6NHS7 340 aaPredicted RBP16.72■□□□□ 0.27
CCM2-217ENST00000492883 GJA5P36382 358 aa16.72■□□□□ 0.27
CCM2-217ENST00000492883 PPATQ06203 517 aa16.72■□□□□ 0.27
CCM2-217ENST00000492883 C12orf60Q5U649 245 aa16.72■□□□□ 0.27
CCM2-217ENST00000492883 CTR9Q6PD62 1173 aa16.72■□□□□ 0.27
CCM2-217ENST00000492883 CWC27Q6UX04 472 aaKnown RBP16.72■□□□□ 0.27
CCM2-217ENST00000492883 IFNL3Q8IZI9 196 aa16.72■□□□□ 0.27
CCM2-217ENST00000492883 DNAJC18Q9H819 358 aa16.72■□□□□ 0.27
CCM2-217ENST00000492883 ARPP21Q9UBL0 812 aaPredicted RBP16.72■□□□□ 0.27
CCM2-217ENST00000492883 ZHX2Q9Y6X8 837 aa16.72■□□□□ 0.27
CCM2-217ENST00000492883 CYP2D7A0A087X1C5 515 aa16.71■□□□□ 0.27
CCM2-217ENST00000492883 MINDY4BA8MYZ0 360 aa16.71■□□□□ 0.27
CCM2-217ENST00000492883 PTPRAP18433 802 aa16.71■□□□□ 0.27
CCM2-217ENST00000492883 MFAP1P55081 439 aaKnown RBP16.71■□□□□ 0.27
CCM2-217ENST00000492883 INHBEP58166 350 aa16.71■□□□□ 0.27
CCM2-217ENST00000492883 SREBF2Q12772 1141 aa16.71■□□□□ 0.27
CCM2-217ENST00000492883 RRP1BQ14684 758 aaKnown RBP16.71■□□□□ 0.27
CCM2-217ENST00000492883 WBP1LQ9NX94 342 aa16.71■□□□□ 0.27
CCM2-217ENST00000492883 IRF6O14896 467 aa16.7■□□□□ 0.26
CCM2-217ENST00000492883 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
CCM2-217ENST00000492883 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
CCM2-217ENST00000492883 GTF2A2P52657 109 aa16.7■□□□□ 0.26
CCM2-217ENST00000492883 EVX2Q03828 476 aa16.7■□□□□ 0.26
CCM2-217ENST00000492883 PPIL2Q13356 520 aa16.7■□□□□ 0.26
CCM2-217ENST00000492883 CERKLQ49MI3 558 aaPredicted RBP16.7■□□□□ 0.26
CCM2-217ENST00000492883 SBK1Q52WX2 424 aa16.7■□□□□ 0.26
CCM2-217ENST00000492883 TATDN1Q6P1N9 297 aa16.7■□□□□ 0.26
CCM2-217ENST00000492883 DYNLL2Q96FJ2 89 aa16.7■□□□□ 0.26
CCM2-217ENST00000492883 NAPBQ9H115 298 aa16.7■□□□□ 0.26
CCM2-217ENST00000492883 SWAP70Q9UH65 585 aa16.7■□□□□ 0.26
CCM2-217ENST00000492883 GDF11O95390 407 aa16.69■□□□□ 0.26
CCM2-217ENST00000492883 ASNSP08243 561 aa16.69■□□□□ 0.26
CCM2-217ENST00000492883 TM4SF4P48230 202 aa16.69■□□□□ 0.26
CCM2-217ENST00000492883 GABPAQ06546 454 aa16.69■□□□□ 0.26
CCM2-217ENST00000492883 SNAPC2Q13487 334 aa16.69■□□□□ 0.26
CCM2-217ENST00000492883 VPS53Q5VIR6 699 aa16.69■□□□□ 0.26
CCM2-217ENST00000492883 EPB41L4AQ9HCS5 686 aaPredicted RBP16.69■□□□□ 0.26
CCM2-217ENST00000492883 CCDC171Q6TFL3 1326 aa16.69■□□□□ 0.26
CCM2-217ENST00000492883 SMIM22K7EJ46 135 aa16.68■□□□□ 0.26
CCM2-217ENST00000492883 SHMT1P34896 483 aa16.68■□□□□ 0.26
CCM2-217ENST00000492883 ZNF589Q86UQ0 364 aaPredicted RBP16.68■□□□□ 0.26
CCM2-217ENST00000492883 CCDC84Q86UT8 332 aaPredicted RBP16.68■□□□□ 0.26
CCM2-217ENST00000492883 STK11IPQ8N1F8 1099 aa16.68■□□□□ 0.26
CCM2-217ENST00000492883 SLC44A5Q8NCS7 719 aa16.68■□□□□ 0.26
CCM2-217ENST00000492883 RUFY2Q8WXA3 655 aa16.68■□□□□ 0.26
CCM2-217ENST00000492883 MS4A4AQ96JQ5 239 aa16.68■□□□□ 0.26
CCM2-217ENST00000492883 CABP5Q9NP86 173 aa16.68■□□□□ 0.26
CCM2-217ENST00000492883 GINM1Q9NU53 330 aa16.68■□□□□ 0.26
CCM2-217ENST00000492883 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.68■□□□□ 0.26
CCM2-217ENST00000492883 TAOK2Q9UL54 1235 aa16.68■□□□□ 0.26
CCM2-217ENST00000492883 CCL15-CCL14A0A0B4J2E2 113 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
CCM2-217ENST00000492883 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms