RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 SLF2Q8IX21 1173 aa16.97■□□□□ 0.31
CTDSP1-210ENST00000491064 SSH1Q8WYL5 1049 aa16.97■□□□□ 0.31
CTDSP1-210ENST00000491064 C11orf49Q9H6J7 331 aa16.97■□□□□ 0.31
CTDSP1-210ENST00000491064 ABCF2Q9UG63 623 aa16.97■□□□□ 0.31
CTDSP1-210ENST00000491064 STXBP5LQ9Y2K9 1186 aa16.97■□□□□ 0.31
CTDSP1-210ENST00000491064 MROH7-TTC4A0A0A0MT08 1334 aa16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 LAMA2P24043 3122 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 FAM196BA6NMK8 535 aa16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 IL15P40933 162 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 RHBDL3P58872 404 aa16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 RASGRF1Q13972 1273 aa16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 TDHQ8IZJ6 230 aa16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 ZNF280CQ8ND82 737 aa16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 OSBPL5Q9H0X9 879 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.96■□□□□ 0.315e-6■□□□□ 10.3
CTDSP1-210ENST00000491064 MTMR10Q9NXD2 777 aa16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 OGDHLQ9ULD0 1010 aa16.96■□□□□ 0.31
CTDSP1-210ENST00000491064 PDS5AQ29RF7 1337 aaKnown RBP16.96■□□□□ 0.3
CTDSP1-210ENST00000491064 ZNF521Q96K83 1311 aa16.96■□□□□ 0.3
CTDSP1-210ENST00000491064 VCANP13611 3396 aa16.95■□□□□ 0.3
CTDSP1-210ENST00000491064 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-210ENST00000491064 HMGCS2P54868 508 aa16.95■□□□□ 0.3
CTDSP1-210ENST00000491064 PABPC4Q13310 644 aaKnown RBP eCLIP16.95■□□□□ 0.3
CTDSP1-210ENST00000491064 TRIB2Q92519 343 aa16.95■□□□□ 0.3
CTDSP1-210ENST00000491064 ASCC2Q9H1I8 757 aaPredicted RBP16.95■□□□□ 0.3
CTDSP1-210ENST00000491064 GPR75-ASB3A0A0A6YYF3 556 aa16.94■□□□□ 0.3
CTDSP1-210ENST00000491064 SPTY2D1Q68D10 685 aaPredicted RBP16.94■□□□□ 0.3
CTDSP1-210ENST00000491064 ZNF384Q8TF68 577 aa16.94■□□□□ 0.3
CTDSP1-210ENST00000491064 TBC1D2Q9BYX2 928 aa16.94■□□□□ 0.3
CTDSP1-210ENST00000491064 PA2G4Q9UQ80 394 aaKnown RBP16.94■□□□□ 0.3
CTDSP1-210ENST00000491064 PFASO15067 1338 aa16.94■□□□□ 0.3
CTDSP1-210ENST00000491064 COL2A1P02458 1487 aaPredicted RBP16.93■□□□□ 0.3
CTDSP1-210ENST00000491064 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
CTDSP1-210ENST00000491064 MECOMQ03112 1051 aa16.93■□□□□ 0.3
CTDSP1-210ENST00000491064 SH3D19Q5HYK7 790 aa16.93■□□□□ 0.3
CTDSP1-210ENST00000491064 MAP3K21Q5TCX8 1036 aa16.93■□□□□ 0.3
CTDSP1-210ENST00000491064 UBE2OQ9C0C9 1292 aaKnown RBP16.93■□□□□ 0.3
CTDSP1-210ENST00000491064 MORF4L1Q9UBU8 362 aa16.93■□□□□ 0.3
CTDSP1-210ENST00000491064 DNAH12Q6ZR08 3092 aa16.93■□□□□ 0.3
CTDSP1-210ENST00000491064 CAP2P40123 477 aa16.92■□□□□ 0.3
CTDSP1-210ENST00000491064 TIMM10P62072 90 aa16.92■□□□□ 0.3
CTDSP1-210ENST00000491064 RRP1BQ14684 758 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-210ENST00000491064 FAM9BQ8IZU0 186 aa16.92■□□□□ 0.3
CTDSP1-210ENST00000491064 COPRSQ9NQ92 184 aa16.92■□□□□ 0.3
CTDSP1-210ENST00000491064 USP17L5A8MUK1 530 aa16.91■□□□□ 0.3
CTDSP1-210ENST00000491064 PRKAR2AP13861 404 aaKnown RBP16.91■□□□□ 0.3
CTDSP1-210ENST00000491064 CYP2B6P20813 491 aa16.91■□□□□ 0.3
CTDSP1-210ENST00000491064 ERICH6Q7L0X2 663 aa16.91■□□□□ 0.3
CTDSP1-210ENST00000491064 SIPA1L1O43166 1804 aa16.91■□□□□ 0.3
CTDSP1-210ENST00000491064 ANP32CO43423 234 aa16.9■□□□□ 0.3
CTDSP1-210ENST00000491064 MAP4K4O95819 1239 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-210ENST00000491064 COL6A1P12109 1028 aa16.9■□□□□ 0.3
CTDSP1-210ENST00000491064 XRCC5P13010 732 aaKnown RBP16.9■□□□□ 0.3
CTDSP1-210ENST00000491064 NUDT12Q9BQG2 462 aa16.9■□□□□ 0.3
CTDSP1-210ENST00000491064 AS3MTQ9HBK9 375 aa16.9■□□□□ 0.3
CTDSP1-210ENST00000491064 EYSQ5T1H1 3165 aa16.9■□□□□ 0.3
CTDSP1-210ENST00000491064 PEX10O60683 326 aa16.89■□□□□ 0.29
CTDSP1-210ENST00000491064 IRX3P78415 501 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-210ENST00000491064 SOCS4Q8WXH5 440 aa16.89■□□□□ 0.29
CTDSP1-210ENST00000491064 NSUN4Q96CB9 384 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-210ENST00000491064 XAGE2Q96GT9 111 aa16.89■□□□□ 0.29
CTDSP1-210ENST00000491064 P2RX7Q99572 595 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-210ENST00000491064 COL25A1Q9BXS0 654 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-210ENST00000491064 TXNRD2Q9NNW7 524 aa16.89■□□□□ 0.29
CTDSP1-210ENST00000491064 FRMPD3Q5JV73 1810 aa16.89■□□□□ 0.29
CTDSP1-210ENST00000491064 SPTBN5Q9NRC6 3674 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-210ENST00000491064 A0A1B0GUL7 405 aa16.88■□□□□ 0.29
CTDSP1-210ENST00000491064 HOXA7P31268 230 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-210ENST00000491064 BACE1P56817 501 aa16.88■□□□□ 0.29
CTDSP1-210ENST00000491064 CACNB2Q08289 660 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-210ENST00000491064 MTMR2Q13614 643 aa16.88■□□□□ 0.29
CTDSP1-210ENST00000491064 MVPQ14764 893 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-210ENST00000491064 ALDH1L2Q3SY69 923 aa16.88■□□□□ 0.29
CTDSP1-210ENST00000491064 WDR18Q9BV38 432 aa16.88■□□□□ 0.29
CTDSP1-210ENST00000491064 HERC5Q9UII4 1024 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-210ENST00000491064 E9PSI1 815 aa16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 LDHCP07864 332 aa16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 ZKSCAN1P17029 563 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 HERVK_113P62684 666 aa16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 GSTO1P78417 241 aa16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 LRRC26Q2I0M4 334 aa16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 LHX8Q68G74 356 aa16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 TRMT44Q8IYL2 757 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 GPRC5AQ8NFJ5 357 aa16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 USP6NLQ92738 828 aa16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 HMG20BQ9P0W2 317 aa16.87■□□□□ 0.29
CTDSP1-210ENST00000491064 CDK5RAP2Q96SN8 1893 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 CDH23Q9H251 3354 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 CCND3P30281 292 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 MAPK4P31152 587 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 MDM2Q00987 491 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 TFCP2Q12800 502 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 PI16Q6UXB8 463 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 TBC1D9Q6ZT07 1266 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 TEX11Q8IYF3 940 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 SMC4Q9NTJ3 1288 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 TMOD4Q9NZQ9 345 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 RBPJLQ9UBG7 517 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 HDAC5Q9UQL6 1122 aa16.86■□□□□ 0.29
CTDSP1-210ENST00000491064 AKAP2Q9Y2D5 859 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms