RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 NCOA7Q8NI08 942 aa21.13■□□□□ 0.97
POLR2J3-205ENST00000489144 ZSCAN31Q96LW9 406 aaPredicted RBP21.13■□□□□ 0.97
POLR2J3-205ENST00000489144 SH2B1Q9NRF2 756 aaPredicted RBP21.13■□□□□ 0.97
POLR2J3-205ENST00000489144 H0YIN7 160 aa21.13■□□□□ 0.97
POLR2J3-205ENST00000489144 SYT1P21579 422 aa21.13■□□□□ 0.97
POLR2J3-205ENST00000489144 EP400NLQ6ZTU2 488 aa21.13■□□□□ 0.97
POLR2J3-205ENST00000489144 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.13■□□□□ 0.97
POLR2J3-205ENST00000489144 CYP2D6P10635 497 aa21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 DBNDD1Q9H9R9 158 aa21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 GDPD2Q9HCC8 539 aa21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 RGPD3A6NKT7 1758 aaPredicted RBP21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 RGPD4Q7Z3J3 1758 aa21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 VPS37CA5D8V6 355 aaPredicted RBP21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 ICE2Q659A1 982 aa21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 CCDC144CPQ8IYA2 1237 aa21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 KIF18AQ8NI77 898 aa21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 RASSF4Q9H2L5 321 aa21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 CEP83Q9Y592 693 aa21.12■□□□□ 0.97
POLR2J3-205ENST00000489144 HMGB1P09429 215 aaKnown RBP21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 HMGB2P26583 209 aaKnown RBP21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 MFSD14BQ5SR56 506 aa21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 MYL10Q9BUA6 226 aa21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 ATF5Q9Y2D1 282 aaPredicted RBP21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 CHD4Q14839 1912 aa21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 BRD1O95696 1058 aa21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 ALDH1B1P30837 517 aa21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 TRDNQ13061 729 aa21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 CEP120Q8N960 986 aa21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 NACAP1Q9BZK3 213 aa21.11■□□□□ 0.97
POLR2J3-205ENST00000489144 SLX4Q8IY92 1834 aa21.1■□□□□ 0.97
POLR2J3-205ENST00000489144 CT47A1Q5JQC4 288 aaPredicted RBP21.1■□□□□ 0.97
POLR2J3-205ENST00000489144 FERMT3Q86UX7 667 aa21.1■□□□□ 0.97
POLR2J3-205ENST00000489144 GTF3C6Q969F1 213 aa21.1■□□□□ 0.97
POLR2J3-205ENST00000489144 DUOX1Q9NRD9 1551 aa21.1■□□□□ 0.97
POLR2J3-205ENST00000489144 TMED8Q6PL24 325 aaPredicted RBP21.1■□□□□ 0.97
POLR2J3-205ENST00000489144 EGFL6Q8IUX8 553 aa21.1■□□□□ 0.97
POLR2J3-205ENST00000489144 SH3RF3Q8TEJ3 882 aaPredicted RBP21.1■□□□□ 0.97
POLR2J3-205ENST00000489144 BRMS1Q9HCU9 246 aa21.1■□□□□ 0.97
POLR2J3-205ENST00000489144 KLF18A0A0U1RQI7 1052 aa21.09■□□□□ 0.97
POLR2J3-205ENST00000489144 C17orf53Q8N3J3 647 aaPredicted RBP21.09■□□□□ 0.97
POLR2J3-205ENST00000489144 ZC3H12CQ9C0D7 883 aaKnown RBP21.09■□□□□ 0.97
POLR2J3-205ENST00000489144 PPARAQ07869 468 aa21.09■□□□□ 0.97
POLR2J3-205ENST00000489144 WDR66Q8TBY9 1149 aa21.09■□□□□ 0.97
POLR2J3-205ENST00000489144 PPP1R1BQ9UD71 204 aaPredicted RBP21.09■□□□□ 0.97
POLR2J3-205ENST00000489144 USP17L12C9JPN9 530 aa21.08■□□□□ 0.97
POLR2J3-205ENST00000489144 USP17L21D6R901 530 aa21.08■□□□□ 0.97
POLR2J3-205ENST00000489144 STX6O43752 255 aa21.08■□□□□ 0.97
POLR2J3-205ENST00000489144 PDIA3P30101 505 aaKnown RBP21.08■□□□□ 0.97
POLR2J3-205ENST00000489144 ZSWIM5Q9P217 1185 aa21.08■□□□□ 0.97
POLR2J3-205ENST00000489144 C21orf2O43822 256 aa21.08■□□□□ 0.96
POLR2J3-205ENST00000489144 CYP2C19P33261 490 aa21.08■□□□□ 0.96
POLR2J3-205ENST00000489144 ALDH8A1Q9H2A2 487 aaPredicted RBP21.08■□□□□ 0.96
POLR2J3-205ENST00000489144 GOLGA8BA8MQT2 603 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 G3V3G9 751 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 IL1R1P14778 569 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 GNAT2P19087 354 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 DCAF8Q5TAQ9 597 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 FAM173BQ6P4H8 233 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 MFSD6Q6ZSS7 791 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 LTBP1Q14766 1721 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 LRRC37AA6NMS7 1700 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 CTDNEP1O95476 244 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 USP17L8P0C7I0 530 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 CCDC172P0C7W6 258 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 ALX1Q15699 326 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 AKNAD1Q5T1N1 836 aa21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 RBM27Q9P2N5 1060 aaKnown RBP21.07■□□□□ 0.96
POLR2J3-205ENST00000489144 GUCY2CP25092 1073 aa21.06■□□□□ 0.96
POLR2J3-205ENST00000489144 CDC37L1Q7L3B6 337 aa21.06■□□□□ 0.96
POLR2J3-205ENST00000489144 RNF214Q8ND24 703 aa21.06■□□□□ 0.96
POLR2J3-205ENST00000489144 SAP30BPQ9UHR5 308 aaKnown RBP21.06■□□□□ 0.96
POLR2J3-205ENST00000489144 SYCE3A1L190 88 aa21.06■□□□□ 0.96
POLR2J3-205ENST00000489144 SCNN1DP51172 638 aa21.06■□□□□ 0.96
POLR2J3-205ENST00000489144 LARP1BQ659C4 914 aaKnown RBP21.06■□□□□ 0.96
POLR2J3-205ENST00000489144 CERS5Q8N5B7 392 aa21.06■□□□□ 0.96
POLR2J3-205ENST00000489144 TMX4Q9H1E5 349 aaPredicted RBP21.06■□□□□ 0.96
POLR2J3-205ENST00000489144 FAM53CQ9NYF3 392 aa21.06■□□□□ 0.96
POLR2J3-205ENST00000489144 PRPF40AO75400 957 aaKnown RBP21.05■□□□□ 0.96
POLR2J3-205ENST00000489144 C15orf52Q6ZUT6 534 aaKnown RBP21.05■□□□□ 0.96
POLR2J3-205ENST00000489144 TTC12Q9H892 705 aaPredicted RBP21.05■□□□□ 0.96
POLR2J3-205ENST00000489144 DCP1AQ9NPI6 582 aaPredicted RBP21.05■□□□□ 0.96
POLR2J3-205ENST00000489144 CCDC88AQ3V6T2 1871 aa21.05■□□□□ 0.96
POLR2J3-205ENST00000489144 PDS5AQ29RF7 1337 aaKnown RBP21.05■□□□□ 0.96
POLR2J3-205ENST00000489144 SPTY2D1Q68D10 685 aaPredicted RBP21.05■□□□□ 0.96
POLR2J3-205ENST00000489144 MICU3Q86XE3 530 aa21.05■□□□□ 0.96
POLR2J3-205ENST00000489144 TGFBRAP1Q8WUH2 860 aa21.05■□□□□ 0.96
POLR2J3-205ENST00000489144 AGXT2Q9BYV1 514 aa21.05■□□□□ 0.96
POLR2J3-205ENST00000489144 PFKFB2O60825 505 aa21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 GUCY1B3Q02153 619 aa21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 AOC3Q16853 763 aa21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 MAPKAPK5Q8IW41 473 aa21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 GPT2Q8TD30 523 aa21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 MCM9Q9NXL9 1143 aa21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 TMEM67Q5HYA8 995 aa21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 NFXL1Q6ZNB6 911 aa21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 CRNKL1Q9BZJ0 848 aaKnown RBP21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 HPS5Q9UPZ3 1129 aa21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 MTMR6Q9Y217 621 aa21.04■□□□□ 0.96
POLR2J3-205ENST00000489144 PTPDC1A2A3K4 754 aa21.03■□□□□ 0.96
POLR2J3-205ENST00000489144 ZSCAN22P10073 491 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms