RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 FASTKD5Q7L8L6 764 aaKnown RBP16.81■□□□□ 0.28
SPTLC1-207ENST00000488921 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.81■□□□□ 0.28
SPTLC1-207ENST00000488921 TBC1D2Q9BYX2 928 aa16.81■□□□□ 0.28
SPTLC1-207ENST00000488921 PI4KBQ9UBF8 816 aa16.81■□□□□ 0.28
SPTLC1-207ENST00000488921 ZHX2Q9Y6X8 837 aa16.81■□□□□ 0.28
SPTLC1-207ENST00000488921 RBBP6Q7Z6E9 1792 aaKnown RBP16.81■□□□□ 0.28
SPTLC1-207ENST00000488921 A0A0G2JLL6 359 aaPredicted RBP16.8■□□□□ 0.28
SPTLC1-207ENST00000488921 KIF22Q14807 665 aa16.8■□□□□ 0.28
SPTLC1-207ENST00000488921 PRRT2Q7Z6L0 340 aaPredicted RBP16.8■□□□□ 0.28
SPTLC1-207ENST00000488921 ADGRA1Q86SQ6 560 aa16.8■□□□□ 0.28
SPTLC1-207ENST00000488921 MAGEB6Q8N7X4 407 aa16.8■□□□□ 0.28
SPTLC1-207ENST00000488921 TGFBRAP1Q8WUH2 860 aa16.8■□□□□ 0.28
SPTLC1-207ENST00000488921 PARK7Q99497 189 aaKnown RBP16.8■□□□□ 0.28
SPTLC1-207ENST00000488921 MGAMO43451 1857 aa16.8■□□□□ 0.28
SPTLC1-207ENST00000488921 DDX60LQ5H9U9 1706 aaKnown RBP16.79■□□□□ 0.28
SPTLC1-207ENST00000488921 PDHXO00330 501 aa16.79■□□□□ 0.28
SPTLC1-207ENST00000488921 MAPKAPK5Q8IW41 473 aa16.79■□□□□ 0.28
SPTLC1-207ENST00000488921 TRIM34Q9BYJ4 488 aa16.79■□□□□ 0.28
SPTLC1-207ENST00000488921 PTPN22Q9Y2R2 807 aa16.79■□□□□ 0.28
SPTLC1-207ENST00000488921 AFG3L2Q9Y4W6 797 aa16.79■□□□□ 0.28
SPTLC1-207ENST00000488921 ZSWIM8A7E2V4 1837 aa16.79■□□□□ 0.28
SPTLC1-207ENST00000488921 FAM196BA6NMK8 535 aa16.78■□□□□ 0.28
SPTLC1-207ENST00000488921 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
SPTLC1-207ENST00000488921 SOX10P56693 466 aa16.78■□□□□ 0.28
SPTLC1-207ENST00000488921 MOGSQ13724 837 aa16.78■□□□□ 0.28
SPTLC1-207ENST00000488921 CRACR2BQ8N4Y2 399 aaPredicted RBP16.78■□□□□ 0.28
SPTLC1-207ENST00000488921 ANTXR1Q9H6X2 564 aa16.78■□□□□ 0.28
SPTLC1-207ENST00000488921 NDUFB9Q9Y6M9 179 aa16.78■□□□□ 0.28
SPTLC1-207ENST00000488921 HTTP42858 3142 aa16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 GNRH1P01148 92 aa16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 SLURP2P0DP57 97 aa16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 CAP2P40123 477 aa16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 USP5P45974 858 aa16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 DYNLL1P63167 89 aaKnown RBP16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 LACTBP83111 547 aaPredicted RBP16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 GADL1Q6ZQY3 521 aa16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 MIGA1Q8NAN2 632 aa16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 LRRCC1Q9C099 1032 aa16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 SLC45A1Q9Y2W3 748 aa16.77■□□□□ 0.28
SPTLC1-207ENST00000488921 ADGRA2Q96PE1 1338 aa16.76■□□□□ 0.27
SPTLC1-207ENST00000488921 TRIM75PA6NK02 468 aa16.76■□□□□ 0.27
SPTLC1-207ENST00000488921 C17orf99Q6UX52 265 aa16.76■□□□□ 0.27
SPTLC1-207ENST00000488921 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
SPTLC1-207ENST00000488921 FOXP4Q8IVH2 680 aaPredicted RBP16.76■□□□□ 0.27
SPTLC1-207ENST00000488921 DNAJC2Q99543 621 aaKnown RBP16.76■□□□□ 0.27
SPTLC1-207ENST00000488921 BCL11AQ9H165 835 aa16.76■□□□□ 0.27
SPTLC1-207ENST00000488921 AS3MTQ9HBK9 375 aa16.76■□□□□ 0.27
SPTLC1-207ENST00000488921 GINM1Q9NU53 330 aa16.76■□□□□ 0.27
SPTLC1-207ENST00000488921 MYH8P13535 1937 aa16.76■□□□□ 0.27
SPTLC1-207ENST00000488921 GOLIM4O00461 696 aa16.75■□□□□ 0.27
SPTLC1-207ENST00000488921 ASNSP08243 561 aa16.75■□□□□ 0.27
SPTLC1-207ENST00000488921 GPAT2Q6NUI2 795 aa16.75■□□□□ 0.27
SPTLC1-207ENST00000488921 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
SPTLC1-207ENST00000488921 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
SPTLC1-207ENST00000488921 CPA4Q9UI42 421 aa16.75■□□□□ 0.27
SPTLC1-207ENST00000488921 PALD1Q9ULE6 856 aa16.75■□□□□ 0.27
SPTLC1-207ENST00000488921 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 PDE6AP16499 860 aa16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 ATP5JP18859 108 aa16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 PRMT2P55345 433 aa16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 SLC9C2Q5TAH2 1124 aa16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 PAG1Q9NWQ8 432 aa16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 SAP30BPQ9UHR5 308 aaKnown RBP16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 PNMA3Q9UL41 463 aa16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 AGTPBP1Q9UPW5 1226 aa16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 CENPFP49454 3210 aa16.74■□□□□ 0.27
SPTLC1-207ENST00000488921 MAGEB6P1A0A0J9YX57 407 aa16.73■□□□□ 0.27
SPTLC1-207ENST00000488921 PABPC4Q13310 644 aaKnown RBP eCLIP16.73■□□□□ 0.27
SPTLC1-207ENST00000488921 NBPF11Q86T75 865 aa16.73■□□□□ 0.27
SPTLC1-207ENST00000488921 SMCR8Q8TEV9 937 aaPredicted RBP16.73■□□□□ 0.27
SPTLC1-207ENST00000488921 CRNKL1Q9BZJ0 848 aaKnown RBP16.73■□□□□ 0.27
SPTLC1-207ENST00000488921 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.73■□□□□ 0.27
SPTLC1-207ENST00000488921 CYP2C8P10632 490 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 RRP1P56182 461 aaKnown RBP16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 CAP1Q01518 475 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 SPP2Q13103 211 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 SLC9C1Q4G0N8 1177 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 CCDC84Q86UT8 332 aaPredicted RBP16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 ARMC5Q96C12 935 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 GPATCH3Q96I76 525 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 HAUS7Q99871 368 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 RIOK1Q9BRS2 568 aaKnown RBP16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 EHD4Q9H223 541 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 BOLA2Q9H3K6 86 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 DNAJC18Q9H819 358 aa16.72■□□□□ 0.27
SPTLC1-207ENST00000488921 ZNF532Q9HCE3 1301 aa16.71■□□□□ 0.27
SPTLC1-207ENST00000488921 BCRP11274 1271 aa16.71■□□□□ 0.27
SPTLC1-207ENST00000488921 HOXD10P28358 340 aa16.71■□□□□ 0.27
SPTLC1-207ENST00000488921 RRP1BQ14684 758 aaKnown RBP16.71■□□□□ 0.27
SPTLC1-207ENST00000488921 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
SPTLC1-207ENST00000488921 ARHGAP39Q9C0H5 1083 aa16.71■□□□□ 0.27
SPTLC1-207ENST00000488921 SERPINB13Q9UIV8 391 aa16.71■□□□□ 0.27
SPTLC1-207ENST00000488921 PTCH2Q9Y6C5 1203 aa16.71■□□□□ 0.27
SPTLC1-207ENST00000488921 PSMC4P43686 418 aa16.7■□□□□ 0.26
SPTLC1-207ENST00000488921 HMGCS2P54868 508 aa16.7■□□□□ 0.26
SPTLC1-207ENST00000488921 SLC4A8Q2Y0W8 1093 aa16.7■□□□□ 0.26
SPTLC1-207ENST00000488921 SH3D19Q5HYK7 790 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms