RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 MAP3K9P80192 1104 aa18.82■□□□□ 0.6
C9orf3-219ENST00000488186 GRM1Q13255 1194 aa18.82■□□□□ 0.6
C9orf3-219ENST00000488186 GIMAP6Q6P9H5 292 aa18.82■□□□□ 0.6
C9orf3-219ENST00000488186 ANKRD13AQ8IZ07 590 aa18.82■□□□□ 0.6
C9orf3-219ENST00000488186 SLC10A4Q96EP9 437 aa18.82■□□□□ 0.6
C9orf3-219ENST00000488186 CAPNS2Q96L46 248 aa18.82■□□□□ 0.6
C9orf3-219ENST00000488186 WRNIP1Q96S55 665 aa18.82■□□□□ 0.6
C9orf3-219ENST00000488186 HERC5Q9UII4 1024 aaKnown RBP18.82■□□□□ 0.6
C9orf3-219ENST00000488186 CSADQ9Y600 493 aa18.82■□□□□ 0.6
C9orf3-219ENST00000488186 COL2A1P02458 1487 aaPredicted RBP18.82■□□□□ 0.6
C9orf3-219ENST00000488186 SSC5DA1L4H1 1573 aa18.81■□□□□ 0.6
C9orf3-219ENST00000488186 GSG1L2A8MUP6 293 aa18.81■□□□□ 0.6
C9orf3-219ENST00000488186 CHMLP26374 656 aa18.81■□□□□ 0.6
C9orf3-219ENST00000488186 NOGQ13253 232 aa18.81■□□□□ 0.6
C9orf3-219ENST00000488186 REM2Q8IYK8 340 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-219ENST00000488186 NAPBQ9H115 298 aa18.81■□□□□ 0.6
C9orf3-219ENST00000488186 CCDC171Q6TFL3 1326 aa18.8■□□□□ 0.6
C9orf3-219ENST00000488186 MINDY4BA8MYZ0 360 aa18.8■□□□□ 0.6
C9orf3-219ENST00000488186 USP17L12C9JPN9 530 aa18.8■□□□□ 0.6
C9orf3-219ENST00000488186 USP17L21D6R901 530 aa18.8■□□□□ 0.6
C9orf3-219ENST00000488186 TBC1D12O60347 775 aa18.8■□□□□ 0.6
C9orf3-219ENST00000488186 IFNL3Q8IZI9 196 aa18.8■□□□□ 0.6
C9orf3-219ENST00000488186 SERPINB13Q9UIV8 391 aa18.8■□□□□ 0.6
C9orf3-219ENST00000488186 FOCADQ5VW36 1801 aa18.79■□□□□ 0.6
C9orf3-219ENST00000488186 MAP3K10Q02779 954 aa18.79■□□□□ 0.6
C9orf3-219ENST00000488186 CTR9Q6PD62 1173 aa18.79■□□□□ 0.6
C9orf3-219ENST00000488186 ARPP21Q9UBL0 812 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-219ENST00000488186 LAMB1P07942 1786 aa18.78■□□□□ 0.6
C9orf3-219ENST00000488186 CDK5RAP2Q96SN8 1893 aa18.78■□□□□ 0.6
C9orf3-219ENST00000488186 FAM196BA6NMK8 535 aa18.78■□□□□ 0.6
C9orf3-219ENST00000488186 FAM155AB1AL88 458 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-219ENST00000488186 SLC10A3P09131 477 aa18.78■□□□□ 0.6
C9orf3-219ENST00000488186 PLCD1P51178 756 aa18.78■□□□□ 0.6
C9orf3-219ENST00000488186 MAP2K1Q02750 393 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-219ENST00000488186 CYP4F22Q6NT55 531 aa18.78■□□□□ 0.6
C9orf3-219ENST00000488186 ZNF589Q86UQ0 364 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-219ENST00000488186 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.78■□□□□ 0.6
C9orf3-219ENST00000488186 RAD50Q92878 1312 aa18.77■□□□□ 0.6
C9orf3-219ENST00000488186 CDC45O75419 566 aa18.77■□□□□ 0.6
C9orf3-219ENST00000488186 SLC3A2P08195 630 aaKnown RBP18.77■□□□□ 0.6
C9orf3-219ENST00000488186 CYP2D6P10635 497 aa18.77■□□□□ 0.6
C9orf3-219ENST00000488186 HSPD1P10809 573 aaKnown RBP18.77■□□□□ 0.6
C9orf3-219ENST00000488186 C12orf60Q5U649 245 aa18.77■□□□□ 0.6
C9orf3-219ENST00000488186 KIAA1211Q6ZU35 1233 aa18.77■□□□□ 0.6
C9orf3-219ENST00000488186 ZKSCAN4Q969J2 545 aaPredicted RBP18.77■□□□□ 0.6
C9orf3-219ENST00000488186 EHD4Q9H223 541 aa18.77■□□□□ 0.6
C9orf3-219ENST00000488186 ELP3Q9H9T3 547 aa18.77■□□□□ 0.6
C9orf3-219ENST00000488186 PICK1Q9NRD5 415 aa18.77■□□□□ 0.6
C9orf3-219ENST00000488186 MYH1P12882 1939 aa18.76■□□□□ 0.59
C9orf3-219ENST00000488186 CTNND1O60716 968 aaKnown RBP18.76■□□□□ 0.59
C9orf3-219ENST00000488186 SLURP2P0DP57 97 aa18.76■□□□□ 0.59
C9orf3-219ENST00000488186 INPP5BP32019 993 aa18.76■□□□□ 0.59
C9orf3-219ENST00000488186 SBK1Q52WX2 424 aa18.76■□□□□ 0.59
C9orf3-219ENST00000488186 VPS53Q5VIR6 699 aa18.76■□□□□ 0.59
C9orf3-219ENST00000488186 EPB41L4AQ9HCS5 686 aaPredicted RBP18.76■□□□□ 0.59
C9orf3-219ENST00000488186 SWAP70Q9UH65 585 aa18.76■□□□□ 0.59
C9orf3-219ENST00000488186 ZNF112Q9UJU3 913 aa18.76■□□□□ 0.59
C9orf3-219ENST00000488186 CYP2D7A0A087X1C5 515 aa18.75■□□□□ 0.59
C9orf3-219ENST00000488186 VGLL4Q14135 290 aa18.75■□□□□ 0.59
C9orf3-219ENST00000488186 ALX1Q15699 326 aa18.75■□□□□ 0.59
C9orf3-219ENST00000488186 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.75■□□□□ 0.59
C9orf3-219ENST00000488186 RASAL3Q86YV0 1011 aa18.75■□□□□ 0.59
C9orf3-219ENST00000488186 STK11IPQ8N1F8 1099 aa18.75■□□□□ 0.59
C9orf3-219ENST00000488186 CLMNQ96JQ2 1002 aa18.75■□□□□ 0.59
C9orf3-219ENST00000488186 ZNF287Q9HBT7 754 aa18.75■□□□□ 0.59
C9orf3-219ENST00000488186 WBP1LQ9NX94 342 aa18.75■□□□□ 0.59
C9orf3-219ENST00000488186 NAV1Q8NEY1 1877 aa18.74■□□□□ 0.59
C9orf3-219ENST00000488186 PHF20L1A8MW92 1017 aa18.74■□□□□ 0.59
C9orf3-219ENST00000488186 ZBTB48P10074 688 aaPredicted RBP18.74■□□□□ 0.59
C9orf3-219ENST00000488186 CERKLQ49MI3 558 aaPredicted RBP18.74■□□□□ 0.59
C9orf3-219ENST00000488186 METTL16Q86W50 562 aaKnown RBP18.74■□□□□ 0.59
C9orf3-219ENST00000488186 SCYL3Q8IZE3 742 aa18.74■□□□□ 0.59
C9orf3-219ENST00000488186 DYNLL2Q96FJ2 89 aa18.74■□□□□ 0.59
C9orf3-219ENST00000488186 MKNK2Q9HBH9 465 aa18.74■□□□□ 0.59
C9orf3-219ENST00000488186 CABP5Q9NP86 173 aa18.74■□□□□ 0.59
C9orf3-219ENST00000488186 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
C9orf3-219ENST00000488186 TAOK2Q9UL54 1235 aa18.74■□□□□ 0.59
C9orf3-219ENST00000488186 OTOFQ9HC10 1997 aa18.73■□□□□ 0.59
C9orf3-219ENST00000488186 SGSM2O43147 1006 aa18.73■□□□□ 0.59
C9orf3-219ENST00000488186 CA12O43570 354 aa18.73■□□□□ 0.59
C9orf3-219ENST00000488186 FGAP02671 866 aa18.73■□□□□ 0.59
C9orf3-219ENST00000488186 MKRN3Q13064 507 aaKnown RBP18.73■□□□□ 0.59
C9orf3-219ENST00000488186 DSCC1Q9BVC3 393 aa18.73■□□□□ 0.59
C9orf3-219ENST00000488186 MPHOSPH10O00566 681 aaKnown RBP18.72■□□□□ 0.59
C9orf3-219ENST00000488186 GDF11O95390 407 aa18.72■□□□□ 0.59
C9orf3-219ENST00000488186 CAP2P40123 477 aa18.72■□□□□ 0.59
C9orf3-219ENST00000488186 CDK8P49336 464 aa18.72■□□□□ 0.59
C9orf3-219ENST00000488186 INHBEP58166 350 aa18.72■□□□□ 0.59
C9orf3-219ENST00000488186 PDE4BQ07343 736 aa18.72■□□□□ 0.59
C9orf3-219ENST00000488186 PPARAQ07869 468 aa18.72■□□□□ 0.59
C9orf3-219ENST00000488186 NOL9Q5SY16 702 aaKnown RBP18.72■□□□□ 0.59
C9orf3-219ENST00000488186 ERO1BQ86YB8 467 aa18.72■□□□□ 0.59
C9orf3-219ENST00000488186 OPTNQ96CV9 577 aa18.72■□□□□ 0.59
C9orf3-219ENST00000488186 ESYT1Q9BSJ8 1104 aa18.72■□□□□ 0.59
C9orf3-219ENST00000488186 BAZ2AQ9UIF9 1905 aaKnown RBP18.71■□□□□ 0.59
C9orf3-219ENST00000488186 ZNF213O14771 459 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 EVX2Q03828 476 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 GABPAQ06546 454 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 ABCB5Q2M3G0 1257 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 SPRYD7Q5W111 196 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms