RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 IRF6O14896 467 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 HRO43593 1189 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 SMARCA5O60264 1052 aaPredicted RBP7.06□□□□□ -1.28
CUX1-208ENST00000485792 AOC2O75106 756 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 CRKP46108 304 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 RHBDL3P58872 404 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 FKBP1BP68106 108 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 G3BP1Q13283 466 aaKnown RBP eCLIP7.06□□□□□ -1.28
CUX1-208ENST00000485792 PROX2Q3B8N5 592 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 KRT26Q7Z3Y9 468 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 WDR66Q8TBY9 1149 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 CCDC102AQ96A19 550 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 CHMP4BQ9H444 224 aaKnown RBP7.06□□□□□ -1.28
CUX1-208ENST00000485792 TDRD3Q9H7E2 651 aaKnown RBP7.06□□□□□ -1.28
CUX1-208ENST00000485792 IL1RAPL2Q9NP60 686 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.06□□□□□ -1.28
CUX1-208ENST00000485792 FAM198AQ9UFP1 575 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 DENND2AQ9ULE3 1009 aa7.06□□□□□ -1.28
CUX1-208ENST00000485792 RLFQ13129 1914 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 UNCXA6NJT0 531 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 CELF2O95319 508 aaKnown RBP7.05□□□□□ -1.28
CUX1-208ENST00000485792 CYP2E1P05181 493 aaPredicted RBP7.05□□□□□ -1.28
CUX1-208ENST00000485792 RRP1BQ14684 758 aaKnown RBP7.05□□□□□ -1.28
CUX1-208ENST00000485792 DEFB115Q30KQ5 88 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 LDLRAD1Q5T700 205 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 SKAP1Q86WV1 359 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 RASAL3Q86YV0 1011 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.05□□□□□ -1.28
CUX1-208ENST00000485792 DCPSQ96C86 337 aaKnown RBP7.05□□□□□ -1.28
CUX1-208ENST00000485792 CLMNQ96JQ2 1002 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 TMEM39BQ9GZU3 492 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 CCDC8Q9H0W5 538 aaPredicted RBP7.05□□□□□ -1.28
CUX1-208ENST00000485792 DCTPP1Q9H773 170 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 SNRKQ9NRH2 765 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 ZNF70Q9UC06 446 aaPredicted RBP7.05□□□□□ -1.28
CUX1-208ENST00000485792 TSKSQ9UJT2 592 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 HDAC9Q9UKV0 1011 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 TTF2Q9UNY4 1162 aaKnown RBP7.05□□□□□ -1.28
CUX1-208ENST00000485792 PPP2R3BQ9Y5P8 575 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 LAMA4Q16363 1823 aa7.05□□□□□ -1.28
CUX1-208ENST00000485792 RPAP1Q9BWH6 1393 aaPredicted RBP7.05□□□□□ -1.28
CUX1-208ENST00000485792 COL2A1P02458 1487 aaPredicted RBP7.04□□□□□ -1.28
CUX1-208ENST00000485792 A0A0G2JMZ2 1700 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 PLXNB2O15031 1838 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 SURF6O75683 361 aaKnown RBP7.04□□□□□ -1.28
CUX1-208ENST00000485792 WDHD1O75717 1129 aaPredicted RBP7.04□□□□□ -1.28
CUX1-208ENST00000485792 ZAP70P43403 619 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 IRX6P78412 446 aaPredicted RBP7.04□□□□□ -1.28
CUX1-208ENST00000485792 JAG1P78504 1218 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 MAP3K10Q02779 954 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 DLGAP5Q15398 846 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 NBPF12Q5TAG4 269 aaPredicted RBP7.04□□□□□ -1.28
CUX1-208ENST00000485792 CDC42EP5Q6NZY7 148 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 FAM83AQ86UY5 434 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 VPS37DQ86XT2 251 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 APOBEC3FQ8IUX4 373 aaKnown RBP7.04□□□□□ -1.28
CUX1-208ENST00000485792 SULF1Q8IWU6 871 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 EXOC6Q8TAG9 804 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 RHPN1Q8TCX5 695 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.04□□□□□ -1.28
CUX1-208ENST00000485792 NBPF3Q9H094 633 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 DEFB129Q9H1M3 183 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 DNAJC18Q9H819 358 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 ZNF408Q9H9D4 720 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 GNL3LQ9NVN8 582 aaKnown RBP7.04□□□□□ -1.28
CUX1-208ENST00000485792 ADGRG1Q9Y653 693 aa7.04□□□□□ -1.28
CUX1-208ENST00000485792 MAST3O60307 1309 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 TCRBV5S4A2TA0A5A2 114 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 FOXN1O15353 648 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 FOXP2O15409 715 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 RAB11FIP3O75154 756 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 IGHDP01880 384 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 SLC10A3P09131 477 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 UQCRFS1P1P0C7P4 283 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 MAP2K2P36507 400 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 MECOMQ03112 1051 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 AAMPQ13685 434 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 HSP90AB4PQ58FF6 505 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 TMED8Q6PL24 325 aaPredicted RBP7.03□□□□□ -1.28
CUX1-208ENST00000485792 ERC1Q8IUD2 1116 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 ZGPATQ8N5A5 531 aaKnown RBP7.03□□□□□ -1.28
CUX1-208ENST00000485792 SPATA5Q8NB90 893 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 TEKT1Q969V4 418 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 NSUN4Q96CB9 384 aaKnown RBP7.03□□□□□ -1.28
CUX1-208ENST00000485792 IDI2Q9BXS1 227 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 R3HDMLQ9H3Y0 253 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 GBA2Q9HCG7 927 aaPredicted RBP7.03□□□□□ -1.28
CUX1-208ENST00000485792 WBP1LQ9NX94 342 aa7.03□□□□□ -1.28
CUX1-208ENST00000485792 ZNFX1Q9P2E3 1918 aaKnown RBP7.03□□□□□ -1.28
CUX1-208ENST00000485792 MROH7-TTC4A0A0A0MT08 1334 aa7.02□□□□□ -1.28
CUX1-208ENST00000485792 WDR33Q9C0J8 1336 aaKnown RBP7.02□□□□□ -1.28
CUX1-208ENST00000485792 MYH4Q9Y623 1939 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 GPR75-ASB3A0A0A6YYF3 556 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 DDTLA6NHG4 134 aaPredicted RBP7.02□□□□□ -1.29
CUX1-208ENST00000485792 FAM196BA6NMK8 535 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 TCP10L2B9ZVM9 353 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 UBE2Q2LH0YL09 131 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 APBB1O00213 710 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 HMMRO75330 724 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 MAP4K4O95819 1239 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms