RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 FOXP4Q8IVH2 680 aaPredicted RBP23.81■■□□□ 1.4
COL6A2-208ENST00000485591 ZNF341Q9BYN7 854 aa23.81■■□□□ 1.4
COL6A2-208ENST00000485591 HERC5Q9UII4 1024 aaKnown RBP23.81■■□□□ 1.4
COL6A2-208ENST00000485591 USP2O75604 605 aaPredicted RBP23.8■■□□□ 1.4
COL6A2-208ENST00000485591 PLCD1P51178 756 aa23.8■■□□□ 1.4
COL6A2-208ENST00000485591 ALX1Q15699 326 aa23.8■■□□□ 1.4
COL6A2-208ENST00000485591 C12orf60Q5U649 245 aa23.8■■□□□ 1.4
COL6A2-208ENST00000485591 CTR9Q6PD62 1173 aa23.8■■□□□ 1.4
COL6A2-208ENST00000485591 MIGA2Q7L4E1 593 aa23.8■■□□□ 1.4
COL6A2-208ENST00000485591 ESYT1Q9BSJ8 1104 aa23.8■■□□□ 1.4
COL6A2-208ENST00000485591 NAPBQ9H115 298 aa23.8■■□□□ 1.4
COL6A2-208ENST00000485591 ANGEL1Q9UNK9 670 aaKnown RBP23.8■■□□□ 1.4
COL6A2-208ENST00000485591 FZD1Q9UP38 647 aa23.8■■□□□ 1.4
COL6A2-208ENST00000485591 TLL2Q9Y6L7 1015 aa23.8■■□□□ 1.4
COL6A2-208ENST00000485591 CYP2D6P10635 497 aa23.79■■□□□ 1.4
COL6A2-208ENST00000485591 HSPA6P17066 643 aa23.79■■□□□ 1.4
COL6A2-208ENST00000485591 IREB2P48200 963 aaKnown RBP23.79■■□□□ 1.4
COL6A2-208ENST00000485591 MOB2Q70IA6 237 aa23.79■■□□□ 1.4
COL6A2-208ENST00000485591 DSCC1Q9BVC3 393 aa23.79■■□□□ 1.4
COL6A2-208ENST00000485591 SERPINB13Q9UIV8 391 aa23.79■■□□□ 1.4
COL6A2-208ENST00000485591 TAOK2Q9UL54 1235 aa23.79■■□□□ 1.4
COL6A2-208ENST00000485591 ROBO3Q96MS0 1386 aa23.78■■□□□ 1.4
COL6A2-208ENST00000485591 SAPCD2Q86UD0 394 aa23.78■■□□□ 1.4
COL6A2-208ENST00000485591 CRACR2BQ8N4Y2 399 aaPredicted RBP23.78■■□□□ 1.4
COL6A2-208ENST00000485591 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.78■■□□□ 1.4
COL6A2-208ENST00000485591 KLRG1Q96E93 195 aa23.78■■□□□ 1.4
COL6A2-208ENST00000485591 DNAJC18Q9H819 358 aa23.78■■□□□ 1.4
COL6A2-208ENST00000485591 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.78■■□□□ 1.4
COL6A2-208ENST00000485591 ZNF112Q9UJU3 913 aa23.78■■□□□ 1.4
COL6A2-208ENST00000485591 CYP2D7A0A087X1C5 515 aa23.77■■□□□ 1.4
COL6A2-208ENST00000485591 UNCXA6NJT0 531 aa23.77■■□□□ 1.4
COL6A2-208ENST00000485591 FAM196BA6NMK8 535 aa23.77■■□□□ 1.4
COL6A2-208ENST00000485591 SLURP2P0DP57 97 aa23.77■■□□□ 1.4
COL6A2-208ENST00000485591 EVX2Q03828 476 aa23.77■■□□□ 1.4
COL6A2-208ENST00000485591 GABPAQ06546 454 aa23.77■■□□□ 1.4
COL6A2-208ENST00000485591 LDLRAD1Q5T700 205 aa23.77■■□□□ 1.4
COL6A2-208ENST00000485591 TRIM34Q9BYJ4 488 aa23.77■■□□□ 1.4
COL6A2-208ENST00000485591 ABT1Q9ULW3 272 aaKnown RBP23.77■■□□□ 1.4
COL6A2-208ENST00000485591 UBE2Q2LH0YL09 131 aa23.76■■□□□ 1.39
COL6A2-208ENST00000485591 FGAP02671 866 aa23.76■■□□□ 1.39
COL6A2-208ENST00000485591 HUNKP57058 714 aa23.76■■□□□ 1.39
COL6A2-208ENST00000485591 WRNIP1Q96S55 665 aa23.76■■□□□ 1.39
COL6A2-208ENST00000485591 PHF20L1A8MW92 1017 aa23.75■■□□□ 1.39
COL6A2-208ENST00000485591 MINDY4BA8MYZ0 360 aa23.75■■□□□ 1.39
COL6A2-208ENST00000485591 ANKRD13AQ8IZ07 590 aa23.75■■□□□ 1.39
COL6A2-208ENST00000485591 HHIPL1Q96JK4 782 aa23.75■■□□□ 1.39
COL6A2-208ENST00000485591 SWAP70Q9UH65 585 aa23.75■■□□□ 1.39
COL6A2-208ENST00000485591 SMIM22K7EJ46 135 aa23.74■■□□□ 1.39
COL6A2-208ENST00000485591 MAP3K9P80192 1104 aa23.74■■□□□ 1.39
COL6A2-208ENST00000485591 PPARAQ07869 468 aa23.74■■□□□ 1.39
COL6A2-208ENST00000485591 TATDN1Q6P1N9 297 aa23.73■■□□□ 1.39
COL6A2-208ENST00000485591 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.73■■□□□ 1.39
COL6A2-208ENST00000485591 KIAA1211Q6ZU35 1233 aa23.73■■□□□ 1.39
COL6A2-208ENST00000485591 C16orf86Q6ZW13 317 aa23.73■■□□□ 1.39
COL6A2-208ENST00000485591 DYNLL2Q96FJ2 89 aa23.73■■□□□ 1.39
COL6A2-208ENST00000485591 RASSF10A6NK89 507 aa23.72■■□□□ 1.39
COL6A2-208ENST00000485591 INPP5BP32019 993 aa23.72■■□□□ 1.39
COL6A2-208ENST00000485591 SHMT1P34896 483 aa23.72■■□□□ 1.39
COL6A2-208ENST00000485591 PTH1RQ03431 593 aa23.72■■□□□ 1.39
COL6A2-208ENST00000485591 VGLL4Q14135 290 aa23.72■■□□□ 1.39
COL6A2-208ENST00000485591 NOL9Q5SY16 702 aaKnown RBP23.72■■□□□ 1.39
COL6A2-208ENST00000485591 CTNNA3Q9UI47 895 aa23.72■■□□□ 1.39
COL6A2-208ENST00000485591 ANAPC4Q9UJX5 808 aa23.72■■□□□ 1.39
COL6A2-208ENST00000485591 CSADQ9Y600 493 aa23.72■■□□□ 1.39
COL6A2-208ENST00000485591 PHIPQ8WWQ0 1821 aa23.72■■□□□ 1.39
COL6A2-208ENST00000485591 CTNND1O60716 968 aaKnown RBP23.71■■□□□ 1.39
COL6A2-208ENST00000485591 SLC44A5Q8NCS7 719 aa23.71■■□□□ 1.39
COL6A2-208ENST00000485591 LSG1Q9H089 658 aaKnown RBP23.71■■□□□ 1.39
COL6A2-208ENST00000485591 GREB1LQ9C091 1923 aaPredicted RBP23.71■■□□□ 1.39
COL6A2-208ENST00000485591 SLC3A2P08195 630 aaKnown RBP23.7■■□□□ 1.38
COL6A2-208ENST00000485591 CAP2P40123 477 aa23.7■■□□□ 1.38
COL6A2-208ENST00000485591 CDK8P49336 464 aa23.7■■□□□ 1.38
COL6A2-208ENST00000485591 RRP1BQ14684 758 aaKnown RBP23.7■■□□□ 1.38
COL6A2-208ENST00000485591 RGMBQ6NW40 437 aa23.7■■□□□ 1.38
COL6A2-208ENST00000485591 SCYL3Q8IZE3 742 aa23.7■■□□□ 1.38
COL6A2-208ENST00000485591 MAP4K1Q92918 833 aa23.7■■□□□ 1.38
COL6A2-208ENST00000485591 ZKSCAN4Q969J2 545 aaPredicted RBP23.7■■□□□ 1.38
COL6A2-208ENST00000485591 CLMNQ96JQ2 1002 aa23.7■■□□□ 1.38
COL6A2-208ENST00000485591 ANO2Q9NQ90 1003 aa23.7■■□□□ 1.38
COL6A2-208ENST00000485591 SNCAIPQ9Y6H5 919 aa23.7■■□□□ 1.38
COL6A2-208ENST00000485591 U3KPZ7 1027 aaPredicted RBP23.7■■□□□ 1.38
COL6A2-208ENST00000485591 HTRA3P83110 453 aa23.69■■□□□ 1.38
COL6A2-208ENST00000485591 IMMTQ16891 758 aaKnown RBP23.68■■□□□ 1.38
COL6A2-208ENST00000485591 DEFB115Q30KQ5 88 aa23.68■■□□□ 1.38
COL6A2-208ENST00000485591 ZNF287Q9HBT7 754 aa23.68■■□□□ 1.38
COL6A2-208ENST00000485591 GINM1Q9NU53 330 aa23.68■■□□□ 1.38
COL6A2-208ENST00000485591 THSD7BQ9C0I4 1608 aa23.68■■□□□ 1.38
COL6A2-208ENST00000485591 ZNF213O14771 459 aa23.67■■□□□ 1.38
COL6A2-208ENST00000485591 ZNF157P51786 506 aaPredicted RBP23.67■■□□□ 1.38
COL6A2-208ENST00000485591 HAND2P61296 217 aa23.67■■□□□ 1.38
COL6A2-208ENST00000485591 CTDSPL2Q05D32 466 aa23.67■■□□□ 1.38
COL6A2-208ENST00000485591 PDE4BQ07343 736 aa23.67■■□□□ 1.38
COL6A2-208ENST00000485591 CERKLQ49MI3 558 aaPredicted RBP23.67■■□□□ 1.38
COL6A2-208ENST00000485591 RASAL3Q86YV0 1011 aa23.67■■□□□ 1.38
COL6A2-208ENST00000485591 SLC10A4Q96EP9 437 aa23.67■■□□□ 1.38
COL6A2-208ENST00000485591 ELP3Q9H9T3 547 aa23.67■■□□□ 1.38
COL6A2-208ENST00000485591 SPDYE5A6NIY4 337 aa23.66■■□□□ 1.38
COL6A2-208ENST00000485591 REC8O95072 547 aa23.66■■□□□ 1.38
COL6A2-208ENST00000485591 GDF11O95390 407 aa23.66■■□□□ 1.38
COL6A2-208ENST00000485591 SLC10A3P09131 477 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms