RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ADGRA1Q86SQ6 560 aa24.17■■□□□ 1.46
MSH5-215ENST00000482280 MIGA1Q8NAN2 632 aa24.17■■□□□ 1.46
MSH5-215ENST00000482280 LRRCC1Q9C099 1032 aa24.17■■□□□ 1.46
MSH5-215ENST00000482280 NDUFB9Q9Y6M9 179 aa24.17■■□□□ 1.46
MSH5-215ENST00000482280 FLT1P17948 1338 aa24.16■■□□□ 1.46
MSH5-215ENST00000482280 TRIM75PA6NK02 468 aa24.16■■□□□ 1.46
MSH5-215ENST00000482280 FAM196BA6NMK8 535 aa24.16■■□□□ 1.46
MSH5-215ENST00000482280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.16■■□□□ 1.46
MSH5-215ENST00000482280 TBC1D2Q9BYX2 928 aa24.16■■□□□ 1.46
MSH5-215ENST00000482280 RGS19P49795 217 aa24.15■■□□□ 1.46
MSH5-215ENST00000482280 FOXP4Q8IVH2 680 aaPredicted RBP24.15■■□□□ 1.46
MSH5-215ENST00000482280 ANTXR1Q9H6X2 564 aa24.15■■□□□ 1.46
MSH5-215ENST00000482280 AS3MTQ9HBK9 375 aa24.15■■□□□ 1.46
MSH5-215ENST00000482280 PTPN22Q9Y2R2 807 aa24.15■■□□□ 1.46
MSH5-215ENST00000482280 AFG3L2Q9Y4W6 797 aa24.15■■□□□ 1.46
MSH5-215ENST00000482280 A0A0G2JLL6 359 aaPredicted RBP24.14■■□□□ 1.45
MSH5-215ENST00000482280 GOLIM4O00461 696 aa24.14■■□□□ 1.45
MSH5-215ENST00000482280 DYNLL1P63167 89 aaKnown RBP24.14■■□□□ 1.45
MSH5-215ENST00000482280 SLC9C2Q5TAH2 1124 aa24.14■■□□□ 1.45
MSH5-215ENST00000482280 PRRT2Q7Z6L0 340 aaPredicted RBP24.14■■□□□ 1.45
MSH5-215ENST00000482280 YTHDC1Q96MU7 727 aaKnown RBP24.14■■□□□ 1.45
MSH5-215ENST00000482280 SAP30BPQ9UHR5 308 aaKnown RBP24.14■■□□□ 1.45
MSH5-215ENST00000482280 SLURP2P0DP57 97 aa24.13■■□□□ 1.45
MSH5-215ENST00000482280 CAP2P40123 477 aa24.13■■□□□ 1.45
MSH5-215ENST00000482280 CPA4Q9UI42 421 aa24.13■■□□□ 1.45
MSH5-215ENST00000482280 PALD1Q9ULE6 856 aa24.13■■□□□ 1.45
MSH5-215ENST00000482280 MAGEB6P1A0A0J9YX57 407 aa24.12■■□□□ 1.45
MSH5-215ENST00000482280 GNRH1P01148 92 aa24.12■■□□□ 1.45
MSH5-215ENST00000482280 LACTBP83111 547 aaPredicted RBP24.12■■□□□ 1.45
MSH5-215ENST00000482280 SMCR8Q8TEV9 937 aaPredicted RBP24.12■■□□□ 1.45
MSH5-215ENST00000482280 GPATCH3Q96I76 525 aa24.12■■□□□ 1.45
MSH5-215ENST00000482280 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.12■■□□□ 1.456e-12■■■■■ 30.7
MSH5-215ENST00000482280 USP17L5A8MUK1 530 aa24.11■■□□□ 1.45
MSH5-215ENST00000482280 ASNSP08243 561 aa24.11■■□□□ 1.45
MSH5-215ENST00000482280 NBPF11Q86T75 865 aa24.11■■□□□ 1.45
MSH5-215ENST00000482280 ZNF280CQ8ND82 737 aa24.11■■□□□ 1.45
MSH5-215ENST00000482280 PNMA3Q9UL41 463 aa24.11■■□□□ 1.45
MSH5-215ENST00000482280 HOXD10P28358 340 aa24.1■■□□□ 1.45
MSH5-215ENST00000482280 PABPC4Q13310 644 aaKnown RBP eCLIP24.1■■□□□ 1.45
MSH5-215ENST00000482280 TTC6Q86TZ1 520 aa24.1■■□□□ 1.45
MSH5-215ENST00000482280 CRNKL1Q9BZJ0 848 aaKnown RBP24.1■■□□□ 1.45
MSH5-215ENST00000482280 BOLA2Q9H3K6 86 aa24.1■■□□□ 1.45
MSH5-215ENST00000482280 PAG1Q9NWQ8 432 aa24.1■■□□□ 1.45
MSH5-215ENST00000482280 SLC45A1Q9Y2W3 748 aa24.1■■□□□ 1.45
MSH5-215ENST00000482280 DOCK1Q14185 1865 aa24.1■■□□□ 1.45
MSH5-215ENST00000482280 FMNL1O95466 1100 aaPredicted RBP24.09■■□□□ 1.45
MSH5-215ENST00000482280 PDE6AP16499 860 aa24.09■■□□□ 1.45
MSH5-215ENST00000482280 ATP5JP18859 108 aa24.09■■□□□ 1.45
MSH5-215ENST00000482280 SPP2Q13103 211 aa24.09■■□□□ 1.45
MSH5-215ENST00000482280 SLC4A8Q2Y0W8 1093 aa24.09■■□□□ 1.45
MSH5-215ENST00000482280 SLC9C1Q4G0N8 1177 aa24.09■■□□□ 1.45
MSH5-215ENST00000482280 C17orf99Q6UX52 265 aa24.09■■□□□ 1.45
MSH5-215ENST00000482280 GINM1Q9NU53 330 aa24.09■■□□□ 1.45
MSH5-215ENST00000482280 ECM2O94769 699 aaPredicted RBP24.08■■□□□ 1.45
MSH5-215ENST00000482280 CYP2C8P10632 490 aa24.08■■□□□ 1.45
MSH5-215ENST00000482280 PRMT2P55345 433 aa24.08■■□□□ 1.45
MSH5-215ENST00000482280 MOGSQ13724 837 aa24.08■■□□□ 1.45
MSH5-215ENST00000482280 GPAT2Q6NUI2 795 aa24.08■■□□□ 1.45
MSH5-215ENST00000482280 CCDC84Q86UT8 332 aaPredicted RBP24.08■■□□□ 1.45
MSH5-215ENST00000482280 PROCA1Q8NCQ7 364 aaPredicted RBP24.08■■□□□ 1.45
MSH5-215ENST00000482280 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.08■■□□□ 1.45
MSH5-215ENST00000482280 AGTPBP1Q9UPW5 1226 aa24.08■■□□□ 1.45
MSH5-215ENST00000482280 POLR3DP05423 398 aaPredicted RBP24.07■■□□□ 1.44
MSH5-215ENST00000482280 TMOD4Q9NZQ9 345 aa24.07■■□□□ 1.44
MSH5-215ENST00000482280 ZBTB47Q9UFB7 747 aaPredicted RBP24.07■■□□□ 1.44
MSH5-215ENST00000482280 ZNF532Q9HCE3 1301 aa24.07■■□□□ 1.44
MSH5-215ENST00000482280 PSMC4P43686 418 aa24.06■■□□□ 1.44
MSH5-215ENST00000482280 RRP1P56182 461 aaKnown RBP24.06■■□□□ 1.44
MSH5-215ENST00000482280 ZSCAN25Q6NSZ9 544 aa24.06■■□□□ 1.44
MSH5-215ENST00000482280 HAUS7Q99871 368 aa24.06■■□□□ 1.44
MSH5-215ENST00000482280 SERPINB13Q9UIV8 391 aa24.06■■□□□ 1.44
MSH5-215ENST00000482280 SMARCA5O60264 1052 aaPredicted RBP24.05■■□□□ 1.44
MSH5-215ENST00000482280 OSBPP22059 807 aa24.05■■□□□ 1.44
MSH5-215ENST00000482280 HMGCS2P54868 508 aa24.05■■□□□ 1.44
MSH5-215ENST00000482280 FCGRTP55899 365 aa24.05■■□□□ 1.44
MSH5-215ENST00000482280 DDRGK1Q96HY6 314 aa24.05■■□□□ 1.44
MSH5-215ENST00000482280 TMEM106CQ9BVX2 250 aa24.05■■□□□ 1.44
MSH5-215ENST00000482280 ARHGAP39Q9C0H5 1083 aa24.05■■□□□ 1.44
MSH5-215ENST00000482280 PTCH2Q9Y6C5 1203 aa24.05■■□□□ 1.44
MSH5-215ENST00000482280 GDF11O95390 407 aa24.04■■□□□ 1.44
MSH5-215ENST00000482280 METTL16Q86W50 562 aaKnown RBP24.04■■□□□ 1.44
MSH5-215ENST00000482280 AMOTL1Q8IY63 956 aa24.04■■□□□ 1.44
MSH5-215ENST00000482280 EHD4Q9H223 541 aa24.04■■□□□ 1.44
MSH5-215ENST00000482280 DCTPP1Q9H773 170 aa24.04■■□□□ 1.44
MSH5-215ENST00000482280 ECHDC1Q9NTX5 307 aa24.04■■□□□ 1.44
MSH5-215ENST00000482280 MYO5AQ9Y4I1 1855 aaKnown RBP24.03■■□□□ 1.44
MSH5-215ENST00000482280 RAET1EQ8TD07 263 aa24.03■■□□□ 1.44
MSH5-215ENST00000482280 EDC3Q96F86 508 aaKnown RBP24.03■■□□□ 1.44
MSH5-215ENST00000482280 RIOK1Q9BRS2 568 aaKnown RBP24.03■■□□□ 1.44
MSH5-215ENST00000482280 WDR18Q9BV38 432 aa24.03■■□□□ 1.44
MSH5-215ENST00000482280 CABP5Q9NP86 173 aa24.03■■□□□ 1.44
MSH5-215ENST00000482280 MTMR2Q13614 643 aa24.02■■□□□ 1.44
MSH5-215ENST00000482280 ARMC5Q96C12 935 aa24.02■■□□□ 1.44
MSH5-215ENST00000482280 MCM9Q9NXL9 1143 aa24.02■■□□□ 1.44
MSH5-215ENST00000482280 ZBTB21Q9ULJ3 1066 aa24.02■■□□□ 1.44
MSH5-215ENST00000482280 ADGRA2Q96PE1 1338 aa24.02■■□□□ 1.44
MSH5-215ENST00000482280 C19orf81C9J6K1 198 aa24.01■■□□□ 1.43
MSH5-215ENST00000482280 USP17L10C9JJH3 530 aa24.01■■□□□ 1.43
MSH5-215ENST00000482280 IRX3P78415 501 aaPredicted RBP24.01■■□□□ 1.43
MSH5-215ENST00000482280 RRP1BQ14684 758 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms