RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 BCRP11274 1271 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 PICALMQ13492 652 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 PUM3Q15397 648 aaKnown RBP10.61□□□□□ -0.71
VEGFA-212ENST00000480614 RPGRIP1Q96KN7 1286 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 TRIM6Q9C030 488 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-212ENST00000480614 DEXIO95424 95 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 GPHNQ9NQX3 736 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-212ENST00000480614 ZNF277Q9NRM2 450 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-212ENST00000480614 NOD1Q9Y239 953 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 TLDC2A0PJX2 215 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 UAP1Q16222 522 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-212ENST00000480614 SLC4A8Q2Y0W8 1093 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 SLC9C1Q4G0N8 1177 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 DENND2CQ68D51 928 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 COPS6Q7L5N1 327 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 NOC4LQ9BVI4 516 aaKnown RBP10.61□□□□□ -0.71
VEGFA-212ENST00000480614 ZNF853P0CG23 659 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 CCDC89Q8N998 374 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 RNF34Q969K3 372 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 PLCB4Q15147 1175 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 CCDC84Q86UT8 332 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-212ENST00000480614 MAST1Q9Y2H9 1570 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 H0YCG3 227 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 DCUN1D2Q6PH85 259 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 SMC5Q8IY18 1101 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 MIS12Q9H081 205 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 IMPACTQ9P2X3 320 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 HSP90AA4PQ58FG1 418 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 PLCD3Q8N3E9 789 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 GOLGA5Q8TBA6 731 aa10.61□□□□□ -0.71
VEGFA-212ENST00000480614 SLC12A2P55011 1212 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 NBPF14Q5TI25 921 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.6□□□□□ -0.71
VEGFA-212ENST00000480614 RAB17Q9H0T7 212 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 PPANQ9NQ55 473 aaKnown RBP10.6□□□□□ -0.71
VEGFA-212ENST00000480614 F8W031 263 aaPredicted RBP10.6□□□□□ -0.71
VEGFA-212ENST00000480614 RHOXF2BP0C7M4 288 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 RHOXF2Q9BQY4 288 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 ANGEL1Q9UNK9 670 aaKnown RBP10.6□□□□□ -0.71
VEGFA-212ENST00000480614 POLR3AO14802 1390 aaPredicted RBP10.6□□□□□ -0.71
VEGFA-212ENST00000480614 ARHGEF35A5YM69 484 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 NACA2Q9H009 215 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 CCDC38Q502W7 563 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 KCNH3Q9ULD8 1083 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 ACEP12821 1306 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 SEPT14Q6ZU15 432 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 TMTC1Q8IUR5 882 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 BABAM1Q9NWV8 329 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 PTPDC1A2A3K4 754 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 VWA3AA6NCI4 1184 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 HAUS1Q96CS2 278 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 PFDN6O15212 129 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 MGEA5O60502 916 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 HHATQ5VTY9 493 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 HVCN1Q96D96 273 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 NAA25Q14CX7 972 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 RSPH3Q86UC2 560 aa10.6□□□□□ -0.71
VEGFA-212ENST00000480614 TEKT1Q969V4 418 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 M0QZ92 97 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 DNM2P50570 870 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 ZNF131P52739 623 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 TBC1D8BQ0IIM8 1120 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 PAK2Q13177 524 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 BIRC2Q13490 618 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 UTP14CQ5TAP6 766 aaKnown RBP10.59□□□□□ -0.71
VEGFA-212ENST00000480614 LMBR1LQ6UX01 489 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 MRPL50Q8N5N7 158 aaKnown RBP10.59□□□□□ -0.71
VEGFA-212ENST00000480614 LPXNO60711 386 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 IDI1Q13907 227 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 ANO1Q5XXA6 986 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 KDM3AQ9Y4C1 1321 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 NDUFAB1O14561 156 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 ZNF518AQ6AHZ1 1483 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 TSPOAP1O95153 1857 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 RFX1P22670 979 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 DDB1Q16531 1140 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 BUB1BO60566 1050 aaPredicted RBP10.59□□□□□ -0.71
VEGFA-212ENST00000480614 PDE6BP35913 854 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 CFAP221Q4G0U5 840 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
VEGFA-212ENST00000480614 KARSQ15046 597 aaKnown RBP10.59□□□□□ -0.71
VEGFA-212ENST00000480614 DCAF5Q96JK2 942 aa10.59□□□□□ -0.71
VEGFA-212ENST00000480614 GBP7Q8N8V2 638 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-212ENST00000480614 AZI2Q9H6S1 392 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 RABGAP1Q9Y3P9 1069 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 IRS4O14654 1257 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-212ENST00000480614 TRIM37O94972 964 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 HPDP32754 393 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-212ENST00000480614 PHBP35232 272 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
VEGFA-212ENST00000480614 SIRT1Q96EB6 747 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 FAM83GA6ND36 823 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 CLGNO14967 610 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 INPP5BP32019 993 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 PDZD4Q76G19 769 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-212ENST00000480614 MLKLQ8NB16 471 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 EVCP57679 992 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 MCTP2Q6DN12 878 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms