RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 CDC27P30260 824 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 STAT3P40763 770 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 GSTM4Q03013 218 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 PABPC4Q13310 644 aaKnown RBP eCLIP10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 BRDTQ58F21 947 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 KIAA1211LQ6NV74 962 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 DDX42Q86XP3 938 aaKnown RBP eCLIP10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 CHAC2Q8WUX2 184 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 GMCL1Q96IK5 515 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 GABBR1Q9UBS5 961 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 KLF15Q9UIH9 416 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 PHF24Q9UPV7 400 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 SLC12A7Q9Y666 1083 aa10.07□□□□□ -0.8
GAPVD1-217ENST00000479511 PLCG1P19174 1290 aa10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 CDC25BP30305 580 aa10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 L1CAMP32004 1257 aa10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 LONRF2Q1L5Z9 754 aa10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 INTS3Q68E01 1043 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 GDF6Q6KF10 455 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 NLRC3Q7RTR2 1065 aa10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 UBR7Q8N806 425 aa10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 DDX54Q8TDD1 881 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 ACSBG1Q96GR2 724 aa10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 SLC26A8Q96RN1 970 aa10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 CCDC86Q9H6F5 360 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 CNNM2Q9H8M5 875 aa10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 SNCAIPQ9Y6H5 919 aa10.06□□□□□ -0.8
GAPVD1-217ENST00000479511 TNFRSF10CO14798 259 aa10.05□□□□□ -0.8
GAPVD1-217ENST00000479511 CDCP2Q5VXM1 449 aa10.05□□□□□ -0.8
GAPVD1-217ENST00000479511 TNFRSF25Q93038 417 aa10.05□□□□□ -0.8
GAPVD1-217ENST00000479511 SGSM3Q96HU1 749 aa10.05□□□□□ -0.8
GAPVD1-217ENST00000479511 EXOC2Q96KP1 924 aa10.05□□□□□ -0.8
GAPVD1-217ENST00000479511 NRSN2Q9GZP1 204 aa10.05□□□□□ -0.8
GAPVD1-217ENST00000479511 PHAXQ9H814 394 aaKnown RBP10.05□□□□□ -0.8
GAPVD1-217ENST00000479511 ATP13A2Q9NQ11 1180 aa10.05□□□□□ -0.8
GAPVD1-217ENST00000479511 CCDC194A0A1B0GVG4 234 aa10.04□□□□□ -0.8
GAPVD1-217ENST00000479511 H3BRJ5 948 aa10.04□□□□□ -0.8
GAPVD1-217ENST00000479511 ZNF862O60290 1169 aa10.04□□□□□ -0.8
GAPVD1-217ENST00000479511 CTSBP07858 339 aa10.04□□□□□ -0.8
GAPVD1-217ENST00000479511 ADH7P40394 386 aa10.04□□□□□ -0.8
GAPVD1-217ENST00000479511 RIPOR2Q9Y4F9 1068 aa10.04□□□□□ -0.8
GAPVD1-217ENST00000479511 EID1Q9Y6B2 187 aa10.04□□□□□ -0.8
GAPVD1-217ENST00000479511 CHURC1-FNTBB4DL54 471 aa10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 CABP4P57796 275 aa10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 EXOSC10Q01780 885 aaKnown RBP10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 CYFIP1Q7L576 1253 aa10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 HDXQ7Z353 690 aa10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 LRRC47Q8N1G4 583 aaKnown RBP10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 CRIPAKQ8N1N5 446 aa10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 SLC7A3Q8WY07 619 aa10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 KISS1RQ969F8 398 aaPredicted RBP10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 WDR89Q96FK6 387 aaPredicted RBP10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 CEP89Q96ST8 783 aa10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 MDFIQ99750 246 aa10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 EPN3Q9H201 632 aa10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 SOX17Q9H6I2 414 aaPredicted RBP10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 CAAP1Q9H8G2 361 aa10.03□□□□□ -0.8
GAPVD1-217ENST00000479511 PDE8AO60658 829 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 RFPL3O75679 317 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 RAPGEF3O95398 923 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 SLC7A5Q01650 507 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 MLECQ14165 292 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 FAM50AQ14320 339 aaKnown RBP10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 FAM209AQ5JX71 171 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 TMEM201Q5SNT2 666 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 RNF180Q86T96 592 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 CLUHP3Q96NS8 147 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 FRRS1LQ9P0K9 344 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 KLHL3Q9UH77 587 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 DACH1Q9UI36 760 aa10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 ZNF214Q9UL59 606 aaPredicted RBP10.02□□□□□ -0.81
GAPVD1-217ENST00000479511 IQCA1LA6NCM1 817 aa10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 GSG1L2A8MUP6 293 aa10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 DCDC2CA8MYV0 355 aa10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 TPD52L2O43399 206 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 POLR2BP30876 1174 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 NFKB2Q00653 900 aa10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 GNPTABQ3T906 1256 aa10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 ZC3H12BQ5HYM0 836 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 PSAPL1Q6NUJ1 521 aa10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 TXNDC11Q6PKC3 985 aa10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 NCOA5Q9HCD5 579 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 ARHGEF4Q9NR80 690 aa10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 KRT82Q9NSB4 513 aa10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
GAPVD1-217ENST00000479511 LOC102724159A0A0B4J2E5 919 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 PLEKHD1A6NEE1 506 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 FAM177BA6PVY3 158 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 ST8SIA5O15466 376 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 PEX14O75381 377 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 ARAFP10398 606 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 BMP4P12644 408 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 LIG1P18858 919 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 MAOBP27338 520 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 PWP2Q15269 919 aaKnown RBP10□□□□□ -0.81
GAPVD1-217ENST00000479511 POU4F3Q15319 338 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 YOD1Q5VVQ6 348 aaPredicted RBP10□□□□□ -0.81
GAPVD1-217ENST00000479511 TTC9Q92623 222 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 TRERF1Q96PN7 1200 aa10□□□□□ -0.81
GAPVD1-217ENST00000479511 CSADQ9Y600 493 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms