RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 EPHX2P34913 555 aa13.78□□□□□ -0.2
BEST3-204ENST00000476098 EXOSC10Q01780 885 aaKnown RBP13.78□□□□□ -0.2
BEST3-204ENST00000476098 RASA3Q14644 834 aa13.78□□□□□ -0.2
BEST3-204ENST00000476098 ANGEL2Q5VTE6 544 aaKnown RBP13.78□□□□□ -0.2
BEST3-204ENST00000476098 C16orf86Q6ZW13 317 aa13.78□□□□□ -0.2
BEST3-204ENST00000476098 DHX32Q7L7V1 743 aaKnown RBP13.78□□□□□ -0.2
BEST3-204ENST00000476098 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
BEST3-204ENST00000476098 ZSCAN29Q8IWY8 852 aaPredicted RBP13.78□□□□□ -0.2
BEST3-204ENST00000476098 TTC14Q96N46 770 aa13.78□□□□□ -0.2
BEST3-204ENST00000476098 KRT23Q9C075 422 aa13.78□□□□□ -0.2
BEST3-204ENST00000476098 TMEM39BQ9GZU3 492 aa13.78□□□□□ -0.2
BEST3-204ENST00000476098 EHD4Q9H223 541 aa13.78□□□□□ -0.2
BEST3-204ENST00000476098 CNNM2Q9H8M5 875 aa13.78□□□□□ -0.2
BEST3-204ENST00000476098 PI4KBQ9UBF8 816 aa13.78□□□□□ -0.2
BEST3-204ENST00000476098 IQCA1LA6NCM1 817 aa13.77□□□□□ -0.21
BEST3-204ENST00000476098 HLA-DOAP06340 250 aa13.77□□□□□ -0.21
BEST3-204ENST00000476098 CDK8P49336 464 aa13.77□□□□□ -0.21
BEST3-204ENST00000476098 PDE4BQ07343 736 aa13.77□□□□□ -0.21
BEST3-204ENST00000476098 TNFAIP1Q13829 316 aa13.77□□□□□ -0.21
BEST3-204ENST00000476098 USP50Q70EL3 339 aaPredicted RBP13.77□□□□□ -0.21
BEST3-204ENST00000476098 RALYLQ86SE5 291 aaKnown RBP13.77□□□□□ -0.21
BEST3-204ENST00000476098 METTL16Q86W50 562 aaKnown RBP13.77□□□□□ -0.21
BEST3-204ENST00000476098 SLC44A5Q8NCS7 719 aa13.77□□□□□ -0.21
BEST3-204ENST00000476098 DEFB129Q9H1M3 183 aa13.77□□□□□ -0.21
BEST3-204ENST00000476098 TAF1DQ9H5J8 278 aaPredicted RBP13.77□□□□□ -0.21
BEST3-204ENST00000476098 ZSWIM5Q9P217 1185 aa13.77□□□□□ -0.21
BEST3-204ENST00000476098 SERPINB13Q9UIV8 391 aa13.77□□□□□ -0.21
BEST3-204ENST00000476098 KDM4AO75164 1064 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 CD2BP2O95400 341 aaKnown RBP13.76□□□□□ -0.21
BEST3-204ENST00000476098 SLURP2P0DP57 97 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 MCM5P33992 734 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 TNNI2P48788 182 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 ANTXR2P58335 489 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 RRP12Q5JTH9 1297 aaKnown RBP13.76□□□□□ -0.21
BEST3-204ENST00000476098 CYB5R4Q7L1T6 521 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 CHST3Q7LGC8 479 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 FOXP4Q8IVH2 680 aaPredicted RBP13.76□□□□□ -0.21
BEST3-204ENST00000476098 CDAN1Q8IWY9 1227 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 IL27Q8NEV9 243 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 TCEANC2Q96MN5 208 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 CSRNP1Q96S65 589 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 TOMM22Q9NS69 142 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 PDRG1Q9NUG6 133 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 GGA3Q9NZ52 723 aa13.76□□□□□ -0.21
BEST3-204ENST00000476098 COL2A1P02458 1487 aaPredicted RBP13.76□□□□□ -0.21
BEST3-204ENST00000476098 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
BEST3-204ENST00000476098 APOBEC3FQ8IUX4 373 aaKnown RBP13.75□□□□□ -0.21
BEST3-204ENST00000476098 ESR2Q92731 530 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 SNX21Q969T3 373 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 TEPSINQ96N21 525 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 ALDH8A1Q9H2A2 487 aaPredicted RBP13.75□□□□□ -0.21
BEST3-204ENST00000476098 DNAJC18Q9H819 358 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 MKNK2Q9HBH9 465 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 ZNF287Q9HBT7 754 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 PITPNM2Q9BZ72 1349 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 PRC1O43663 620 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 ST18O60284 1047 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 RANBP6O60518 1105 aaKnown RBP13.75□□□□□ -0.21
BEST3-204ENST00000476098 RASA1P20936 1047 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 ZC3H15Q8WU90 426 aaKnown RBP13.75□□□□□ -0.21
BEST3-204ENST00000476098 LRRC2Q9BYS8 371 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 SWAP70Q9UH65 585 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
BEST3-204ENST00000476098 BAZ2AQ9UIF9 1905 aaKnown RBP13.74□□□□□ -0.21
BEST3-204ENST00000476098 SHMT1P34896 483 aa13.74□□□□□ -0.21
BEST3-204ENST00000476098 NT5C2P49902 561 aa13.74□□□□□ -0.21
BEST3-204ENST00000476098 AK2P54819 239 aa13.74□□□□□ -0.21
BEST3-204ENST00000476098 FAM47AQ5JRC9 791 aa13.74□□□□□ -0.21
BEST3-204ENST00000476098 PNMA8AQ86V59 439 aaPredicted RBP13.74□□□□□ -0.21
BEST3-204ENST00000476098 ZNF444Q8N0Y2 327 aaPredicted RBP13.74□□□□□ -0.21
BEST3-204ENST00000476098 FBXL16Q8N461 479 aa13.74□□□□□ -0.21
BEST3-204ENST00000476098 RRAGCQ9HB90 399 aa13.74□□□□□ -0.21
BEST3-204ENST00000476098 DDX60LQ5H9U9 1706 aaKnown RBP13.74□□□□□ -0.21
BEST3-204ENST00000476098 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 CDK5RAP2Q96SN8 1893 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 FAM196BA6NMK8 535 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 TBC1D12O60347 775 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 TFAP4Q01664 338 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 MAP3K10Q02779 954 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 TOB2Q14106 344 aaPredicted RBP13.73□□□□□ -0.21
BEST3-204ENST00000476098 TATDN1Q6P1N9 297 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 Q6ZUG5 572 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 CRACR2BQ8N4Y2 399 aaPredicted RBP13.73□□□□□ -0.21
BEST3-204ENST00000476098 IGDCC4Q8TDY8 1250 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 DCPSQ96C86 337 aaKnown RBP13.73□□□□□ -0.21
BEST3-204ENST00000476098 AGXT2Q9BYV1 514 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
BEST3-204ENST00000476098 GPHNQ9NQX3 736 aaPredicted RBP13.73□□□□□ -0.21
BEST3-204ENST00000476098 VEGFAP15692 232 aaPredicted RBP13.72□□□□□ -0.21
BEST3-204ENST00000476098 EAPPQ56P03 285 aaPredicted RBP13.72□□□□□ -0.21
BEST3-204ENST00000476098 HERC5Q9UII4 1024 aaKnown RBP13.72□□□□□ -0.21
BEST3-204ENST00000476098 PPP2R3BQ9Y5P8 575 aa13.72□□□□□ -0.21
BEST3-204ENST00000476098 NAV1Q8NEY1 1877 aa13.72□□□□□ -0.21
BEST3-204ENST00000476098 FOCADQ5VW36 1801 aa13.72□□□□□ -0.21
BEST3-204ENST00000476098 TSPY2A6NKD2 308 aa13.72□□□□□ -0.21
BEST3-204ENST00000476098 NBPF12Q5TAG4 269 aaPredicted RBP13.72□□□□□ -0.21
BEST3-204ENST00000476098 PRAMEF18Q5VWM3 479 aa13.72□□□□□ -0.21
BEST3-204ENST00000476098 MIGA2Q7L4E1 593 aa13.72□□□□□ -0.21
BEST3-204ENST00000476098 TMEM87BQ96K49 555 aa13.72□□□□□ -0.21
BEST3-204ENST00000476098 ZKSCAN3Q9BRR0 538 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms