RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 PRELPP51888 382 aa10□□□□□ -0.81
SCAF4-205ENST00000472318 MTMR3Q13615 1198 aa10□□□□□ -0.81
SCAF4-205ENST00000472318 ALKBH2Q6NS38 261 aa10□□□□□ -0.81
SCAF4-205ENST00000472318 PTF1AQ7RTS3 328 aa10□□□□□ -0.81
SCAF4-205ENST00000472318 ZC3HAV1Q7Z2W4 902 aaKnown RBP10□□□□□ -0.81
SCAF4-205ENST00000472318 A6NHS1 94 aa9.99□□□□□ -0.81
SCAF4-205ENST00000472318 ALX3O95076 343 aa9.99□□□□□ -0.81
SCAF4-205ENST00000472318 EPHA1P21709 976 aa9.99□□□□□ -0.81
SCAF4-205ENST00000472318 C1orf127Q8N9H9 656 aa9.99□□□□□ -0.81
SCAF4-205ENST00000472318 ADAM19Q9H013 955 aa9.99□□□□□ -0.81
SCAF4-205ENST00000472318 CHRDQ9H2X0 955 aa9.99□□□□□ -0.81
SCAF4-205ENST00000472318 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.99□□□□□ -0.81
SCAF4-205ENST00000472318 MAP3K5Q99683 1374 aa9.99□□□□□ -0.81
SCAF4-205ENST00000472318 TECPR2O15040 1411 aa9.99□□□□□ -0.81
SCAF4-205ENST00000472318 PLSCR1O15162 318 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 PTPRAP18433 802 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 TMCO4Q5TGY1 634 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 TXNDC11Q6PKC3 985 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 PRR23CQ6ZRP0 262 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 AEBP1Q8IUX7 1158 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 DNAJC5GQ8N7S2 189 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 POP1Q99575 1024 aaKnown RBP9.98□□□□□ -0.81
SCAF4-205ENST00000472318 MTFR1LQ9H019 292 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 MTMR7Q9Y216 660 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 COL14A1Q05707 1796 aaKnown RBP9.98□□□□□ -0.81
SCAF4-205ENST00000472318 ATP10DQ9P241 1426 aa9.98□□□□□ -0.81
SCAF4-205ENST00000472318 PCNTO95613 3336 aa9.97□□□□□ -0.81
SCAF4-205ENST00000472318 SCO2A0A1W2PP80 73 aa9.97□□□□□ -0.81
SCAF4-205ENST00000472318 CES1P23141 567 aa9.97□□□□□ -0.81
SCAF4-205ENST00000472318 CD68P34810 354 aaPredicted RBP9.97□□□□□ -0.81
SCAF4-205ENST00000472318 C8orf34Q49A92 452 aa9.97□□□□□ -0.81
SCAF4-205ENST00000472318 STK26Q9P289 416 aa9.97□□□□□ -0.81
SCAF4-205ENST00000472318 POLIQ9UNA4 740 aa9.97□□□□□ -0.81
SCAF4-205ENST00000472318 KIF1AQ12756 1690 aa9.96□□□□□ -0.81
SCAF4-205ENST00000472318 NFKBIEO00221 500 aa9.96□□□□□ -0.82
SCAF4-205ENST00000472318 FAM13AO94988 1023 aa9.96□□□□□ -0.82
SCAF4-205ENST00000472318 WISP1O95388 367 aa9.96□□□□□ -0.82
SCAF4-205ENST00000472318 ACPPP15309 386 aa9.96□□□□□ -0.82
SCAF4-205ENST00000472318 CHRNA2Q15822 529 aa9.96□□□□□ -0.82
SCAF4-205ENST00000472318 ARTNQ5T4W7 220 aa9.96□□□□□ -0.82
SCAF4-205ENST00000472318 AGGF1Q8N302 714 aaeCLIP9.96□□□□□ -0.82
SCAF4-205ENST00000472318 DZANK1Q9NVP4 752 aa9.96□□□□□ -0.82
SCAF4-205ENST00000472318 NUP155O75694 1391 aa9.96□□□□□ -0.82
SCAF4-205ENST00000472318 NRXN1Q9ULB1 1477 aa9.96□□□□□ -0.82
SCAF4-205ENST00000472318 CARNS1A5YM72 827 aa9.95□□□□□ -0.82
SCAF4-205ENST00000472318 FSCN2O14926 492 aa9.95□□□□□ -0.82
SCAF4-205ENST00000472318 SLC15A2Q16348 729 aa9.95□□□□□ -0.82
SCAF4-205ENST00000472318 KLHL23Q8NBE8 558 aa9.95□□□□□ -0.82
SCAF4-205ENST00000472318 TTC16Q8NEE8 873 aa9.95□□□□□ -0.82
SCAF4-205ENST00000472318 PMFBP1Q8TBY8 1022 aa9.95□□□□□ -0.82
SCAF4-205ENST00000472318 CARD10Q9BWT7 1032 aa9.95□□□□□ -0.82
SCAF4-205ENST00000472318 PRDM11Q9NQV5 511 aa9.95□□□□□ -0.82
SCAF4-205ENST00000472318 SH2B1Q9NRF2 756 aaPredicted RBP9.95□□□□□ -0.82
SCAF4-205ENST00000472318 KCNK4Q9NYG8 393 aa9.95□□□□□ -0.82
SCAF4-205ENST00000472318 USTQ9Y2C2 406 aa9.95□□□□□ -0.82
SCAF4-205ENST00000472318 H3BRJ5 948 aa9.94□□□□□ -0.82
SCAF4-205ENST00000472318 RBM25P49756 843 aaKnown RBP9.94□□□□□ -0.82
SCAF4-205ENST00000472318 FAM117BQ6P1L5 589 aa9.94□□□□□ -0.82
SCAF4-205ENST00000472318 PMEPA1Q969W9 287 aa9.94□□□□□ -0.82
SCAF4-205ENST00000472318 STK32BQ9NY57 414 aa9.94□□□□□ -0.82
SCAF4-205ENST00000472318 FMN2Q9NZ56 1722 aa9.93□□□□□ -0.82
SCAF4-205ENST00000472318 KIAA0232Q92628 1395 aa9.93□□□□□ -0.82
SCAF4-205ENST00000472318 FZD6O60353 706 aa9.93□□□□□ -0.82
SCAF4-205ENST00000472318 TNFRSF21O75509 655 aa9.93□□□□□ -0.82
SCAF4-205ENST00000472318 YBX3P16989 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
SCAF4-205ENST00000472318 CDC25BP30305 580 aa9.93□□□□□ -0.82
SCAF4-205ENST00000472318 USP5P45974 858 aa9.93□□□□□ -0.82
SCAF4-205ENST00000472318 NLGN2Q8NFZ4 835 aa9.93□□□□□ -0.82
SCAF4-205ENST00000472318 SNX29Q8TEQ0 813 aa9.93□□□□□ -0.82
SCAF4-205ENST00000472318 ZNF526Q8TF50 670 aaPredicted RBP9.93□□□□□ -0.82
SCAF4-205ENST00000472318 WNT8BQ93098 351 aa9.93□□□□□ -0.82
SCAF4-205ENST00000472318 PUS7Q96PZ0 661 aaKnown RBP9.93□□□□□ -0.82
SCAF4-205ENST00000472318 ZFP64Q9NPA5 681 aa9.93□□□□□ -0.82
SCAF4-205ENST00000472318 VPS8Q8N3P4 1428 aa9.92□□□□□ -0.82
SCAF4-205ENST00000472318 FAM177BA6PVY3 158 aa9.92□□□□□ -0.82
SCAF4-205ENST00000472318 PDE2AO00408 941 aaPredicted RBP9.92□□□□□ -0.82
SCAF4-205ENST00000472318 ADAM11O75078 769 aa9.92□□□□□ -0.82
SCAF4-205ENST00000472318 GLB1P16278 677 aa9.92□□□□□ -0.82
SCAF4-205ENST00000472318 FKBP4Q02790 459 aaKnown RBP eCLIP9.92□□□□□ -0.82
SCAF4-205ENST00000472318 EHHADHQ08426 723 aa9.92□□□□□ -0.82
SCAF4-205ENST00000472318 LRP8Q14114 963 aa9.92□□□□□ -0.82
SCAF4-205ENST00000472318 ACAD11Q709F0 780 aa9.92□□□□□ -0.82
SCAF4-205ENST00000472318 FOXD4L4Q8WXT5 416 aaPredicted RBP9.92□□□□□ -0.82
SCAF4-205ENST00000472318 SEC31BQ9NQW1 1179 aa9.92□□□□□ -0.82
SCAF4-205ENST00000472318 MFAP1P55081 439 aaKnown RBP9.91□□□□□ -0.82
SCAF4-205ENST00000472318 GJD3Q8N144 294 aa9.91□□□□□ -0.82
SCAF4-205ENST00000472318 TCP11L2Q8N4U5 519 aa9.91□□□□□ -0.82
SCAF4-205ENST00000472318 TMEM102Q8N9M5 508 aaPredicted RBP9.91□□□□□ -0.82
SCAF4-205ENST00000472318 HHIPQ96QV1 700 aa9.91□□□□□ -0.82
SCAF4-205ENST00000472318 UBL7Q96S82 380 aaPredicted RBP9.91□□□□□ -0.82
SCAF4-205ENST00000472318 SOX13Q9UN79 622 aa9.91□□□□□ -0.82
SCAF4-205ENST00000472318 CLTCL1P53675 1640 aa9.91□□□□□ -0.82
SCAF4-205ENST00000472318 SSH2Q76I76 1423 aa9.9□□□□□ -0.82
SCAF4-205ENST00000472318 EREGO14944 169 aa9.9□□□□□ -0.82
SCAF4-205ENST00000472318 CABP4P57796 275 aa9.9□□□□□ -0.82
SCAF4-205ENST00000472318 ZNF211Q13398 564 aaPredicted RBP9.9□□□□□ -0.82
SCAF4-205ENST00000472318 TXNRD1Q16881 649 aa9.9□□□□□ -0.82
SCAF4-205ENST00000472318 TMEM132EQ6IEE7 984 aa9.9□□□□□ -0.82
SCAF4-205ENST00000472318 KIAA1211Q6ZU35 1233 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms