RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 ZNF277Q9NRM2 450 aaPredicted RBP6.8□□□□□ -1.32
HDAC8-216ENST00000470998 DIAPH3Q9NSV4 1193 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 HACL1Q9UJ83 578 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 CDV3Q9UKY7 258 aaKnown RBP6.8□□□□□ -1.32
HDAC8-216ENST00000470998 SH3TC1Q8TE82 1336 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 FER1L6Q2WGJ9 1857 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 COL11A2P13942 1736 aaPredicted RBP6.79□□□□□ -1.32
HDAC8-216ENST00000470998 FRAT2O75474 233 aaPredicted RBP6.79□□□□□ -1.32
HDAC8-216ENST00000470998 SMPD1P17405 629 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 HSPA4P34932 840 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 LRRFIP1Q32MZ4 808 aaKnown RBP6.79□□□□□ -1.32
HDAC8-216ENST00000470998 SH3RF1Q7Z6J0 888 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 NLRP10Q86W26 655 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 ZNF592Q92610 1267 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 RILPL2Q969X0 211 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 SUCLG2Q96I99 432 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 MYD88Q99836 296 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 RTFDC1Q9BY42 306 aaPredicted RBP6.79□□□□□ -1.32
HDAC8-216ENST00000470998 TM6SF1Q9BZW5 370 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 BICC1Q9H694 974 aaKnown RBP6.79□□□□□ -1.32
HDAC8-216ENST00000470998 IL1RAPL2Q9NP60 686 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 ANO2Q9NQ90 1003 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 CWC25Q9NXE8 425 aaPredicted RBP6.79□□□□□ -1.32
HDAC8-216ENST00000470998 ATP6V0A2Q9Y487 856 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 ARFGEF2Q9Y6D5 1785 aa6.79□□□□□ -1.32
HDAC8-216ENST00000470998 SLX4Q8IY92 1834 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 ZBBXA8MT70 800 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 AXIN1O15169 862 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 SIAH2O43255 324 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 CIAO1O76071 339 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 ADH1CP00326 375 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 ANXA1P04083 346 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 LMOD1P29536 600 aaPredicted RBP6.78□□□□□ -1.32
HDAC8-216ENST00000470998 EPHX2P34913 555 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 AIMP1Q12904 312 aaKnown RBP6.78□□□□□ -1.32
HDAC8-216ENST00000470998 GRAPQ13588 217 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 CUL4AQ13619 759 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 CTC1Q2NKJ3 1217 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 CWF19L2Q2TBE0 894 aaKnown RBP6.78□□□□□ -1.32
HDAC8-216ENST00000470998 C4orf48Q5BLP8 95 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 RNF20Q5VTR2 975 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 DDX46Q7L014 1031 aaKnown RBP6.78□□□□□ -1.32
HDAC8-216ENST00000470998 SP8Q8IXZ3 490 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 NIM1KQ8IY84 436 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 LARGE2Q8N3Y3 721 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 GRAPLQ8TC17 118 aaPredicted RBP6.78□□□□□ -1.32
HDAC8-216ENST00000470998 ADAM32Q8TC27 787 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 ISCA1Q9BUE6 129 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 HMG20BQ9P0W2 317 aa6.78□□□□□ -1.32
HDAC8-216ENST00000470998 TRMT112Q9UI30 125 aaKnown RBP6.78□□□□□ -1.32
HDAC8-216ENST00000470998 PASKQ96RG2 1323 aa6.77□□□□□ -1.32
HDAC8-216ENST00000470998 ZNF541Q9H0D2 1346 aa6.77□□□□□ -1.32
HDAC8-216ENST00000470998 TIAM2Q8IVF5 1701 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 H7C1W4 665 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 ZKSCAN1P17029 563 aaPredicted RBP6.77□□□□□ -1.33
HDAC8-216ENST00000470998 ATP5JP18859 108 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 FSHRP23945 695 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 IL15P40933 162 aaPredicted RBP6.77□□□□□ -1.33
HDAC8-216ENST00000470998 CASP7P55210 303 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 NNTQ13423 1086 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 KRT32Q14532 448 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 SF3B3Q15393 1217 aaKnown RBP6.77□□□□□ -1.33
HDAC8-216ENST00000470998 NBPF20Q3BBV1 942 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 AACSQ86V21 672 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 TRMT44Q8IYL2 757 aaKnown RBP6.77□□□□□ -1.33
HDAC8-216ENST00000470998 MPNDQ8N594 471 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.77□□□□□ -1.33
HDAC8-216ENST00000470998 KCNB2Q92953 911 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 CHMP4CQ96CF2 233 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 KAZALD1Q96I82 304 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 PLA2G12BQ9BX93 195 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 C1QTNF2Q9BXJ5 285 aa6.77□□□□□ -1.33
HDAC8-216ENST00000470998 DICER1Q9UPY3 1922 aaKnown RBP6.77□□□□□ -1.33
HDAC8-216ENST00000470998 CDHR2Q9BYE9 1310 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 TMEM88BA6NKF7 163 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 PPIP5K2O43314 1243 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 RAD21O60216 631 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 CYP2E1P05181 493 aaPredicted RBP6.76□□□□□ -1.33
HDAC8-216ENST00000470998 PSMA5P28066 241 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 NEK4P51957 841 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 HTRA3P83110 453 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 PTPN12Q05209 780 aaKnown RBP6.76□□□□□ -1.33
HDAC8-216ENST00000470998 MCM6Q14566 821 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 ANKRD1Q15327 319 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 OLFM4Q6UX06 510 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 DPP8Q6V1X1 898 aaPredicted RBP6.76□□□□□ -1.33
HDAC8-216ENST00000470998 USP50Q70EL3 339 aaPredicted RBP6.76□□□□□ -1.33
HDAC8-216ENST00000470998 ZSCAN31Q96LW9 406 aaPredicted RBP6.76□□□□□ -1.33
HDAC8-216ENST00000470998 SH2B1Q9NRF2 756 aaPredicted RBP6.76□□□□□ -1.33
HDAC8-216ENST00000470998 ZNRF3Q9ULT6 936 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 MAP4K5Q9Y4K4 846 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 PCDHB9Q9Y5E1 797 aa6.76□□□□□ -1.33
HDAC8-216ENST00000470998 SASH1O94885 1247 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 AVPP01185 164 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 PCCAP05165 728 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-216ENST00000470998 HCLS1P14317 486 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-216ENST00000470998 ABL2P42684 1182 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 RFX5P48382 616 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-216ENST00000470998 KIAA2012Q0VF49 1180 aa6.75□□□□□ -1.33
HDAC8-216ENST00000470998 NR5A1Q13285 461 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms