RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 CDC14CA4D256 554 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 FAM177BA6PVY3 158 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 H7C1W4 665 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 LILRA1O75019 489 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 NTSR2O95665 410 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 HMGB2P26583 209 aaKnown RBP5.92□□□□□ -1.46
SF3B1-208ENST00000470268 TM4SF1P30408 202 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 MAP3K10Q02779 954 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 DDR1Q08345 913 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 HSP90AB3PQ58FF7 597 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 EPHA10Q5JZY3 1008 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 MSL1Q68DK7 614 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 UBE3BQ7Z3V4 1068 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 SIRT2Q8IXJ6 389 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 ZNF784Q8NCA9 323 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-208ENST00000470268 SUCLG2Q96I99 432 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 GNEQ9Y223 722 aaKnown RBP5.92□□□□□ -1.46
SF3B1-208ENST00000470268 ZNF652Q9Y2D9 606 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 SRSF11Q05519 484 aaKnown RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 R3HDM1Q15032 1099 aaKnown RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 PHLDB3Q6NSJ2 640 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 ZBTB38Q8NAP3 1195 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 FLAD1Q8NFF5 587 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 POLMQ9NP87 494 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 ENAMQ9NRM1 1142 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 C9orf78Q9NZ63 289 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 LRRFIP2Q9Y608 721 aaKnown RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 NUP98P52948 1817 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 N4BP2Q86UW6 1770 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 SFI1A8K8P3 1242 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 POLRMTO00411 1230 aaKnown RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 PCCAP05165 728 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 GNAI3P08754 354 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 UBTFL1P0CB47 393 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 CTSOP43234 321 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 PARP10Q53GL7 1025 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 C1orf216Q8TAB5 229 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 WHAMMQ8TF30 809 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 GMCL1Q96IK5 515 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 SETDB2Q96T68 719 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 CYLDQ9NQC7 956 aa5.91□□□□□ -1.46
SF3B1-208ENST00000470268 TRMT112Q9UI30 125 aaKnown RBP5.91□□□□□ -1.46
SF3B1-208ENST00000470268 ABCC12Q96J65 1359 aa5.9□□□□□ -1.46
SF3B1-208ENST00000470268 PNMA6EA0A0J9YXQ4 647 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 GNRH1P01148 92 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 IGHDP01880 384 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 GNAI2P04899 355 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 HCLS1P14317 486 aaPredicted RBP5.9□□□□□ -1.47
SF3B1-208ENST00000470268 ATP2B4P23634 1241 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 FOXO4P98177 505 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 GPAT2Q6NUI2 795 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 CEP85Q6P2H3 762 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 CYP2U1Q7Z449 544 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 NLGN1Q8N2Q7 840 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 ANKRD44Q8N8A2 993 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 RNF217Q8TC41 542 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 UTP14AQ9BVJ6 771 aaKnown RBP5.9□□□□□ -1.47
SF3B1-208ENST00000470268 BICC1Q9H694 974 aaKnown RBP5.9□□□□□ -1.47
SF3B1-208ENST00000470268 CARMIL3Q8ND23 1372 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 SH3TC1Q8TE82 1336 aa5.9□□□□□ -1.47
SF3B1-208ENST00000470268 SRCAPQ6ZRS2 3230 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 TMEM229AB2RXF0 380 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 IRS4O14654 1257 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-208ENST00000470268 ZBTB7AO95365 584 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 SERPINB2P05120 415 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 MMP10P09238 476 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 SCNN1DP51172 638 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 RELBQ01201 579 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 RABL6Q3YEC7 729 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-208ENST00000470268 ERICH6BQ5W0A0 696 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 PRR5LQ6MZQ0 368 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 PPP1R42Q7Z4L9 355 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 SKAP1Q86WV1 359 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 NBPF5PQ86XG9 351 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-208ENST00000470268 AGBL1Q96MI9 1066 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 INSM2Q96T92 566 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-208ENST00000470268 PPP4R2Q9NY27 417 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 CDHR2Q9BYE9 1310 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 ANKRD36CQ5JPF3 1778 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 ADH1AP07327 375 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 GDF10P55107 478 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 MTX1Q13505 466 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 AAMPQ13685 434 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 OCLNQ16625 522 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 LMBR1LQ6UX01 489 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.89□□□□□ -1.47
SF3B1-208ENST00000470268 KLHDC4Q8TBB5 520 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 PLA2G12BQ9BX93 195 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 GZF1Q9H116 711 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-208ENST00000470268 ZNF358Q9NW07 568 aa5.89□□□□□ -1.47
SF3B1-208ENST00000470268 COL24A1Q17RW2 1714 aa5.88□□□□□ -1.47
SF3B1-208ENST00000470268 QSER1Q2KHR3 1735 aa5.88□□□□□ -1.47
SF3B1-208ENST00000470268 PHF20L1A8MW92 1017 aa5.88□□□□□ -1.47
SF3B1-208ENST00000470268 BACH1O14867 736 aa5.88□□□□□ -1.47
SF3B1-208ENST00000470268 INHAP05111 366 aa5.88□□□□□ -1.47
SF3B1-208ENST00000470268 CSF1RP07333 972 aa5.88□□□□□ -1.47
SF3B1-208ENST00000470268 ARID4AP29374 1257 aaPredicted RBP5.88□□□□□ -1.47
SF3B1-208ENST00000470268 ADD1P35611 737 aaKnown RBP5.88□□□□□ -1.47
SF3B1-208ENST00000470268 PTGIRP43119 386 aa5.88□□□□□ -1.47
SF3B1-208ENST00000470268 ATP8B2P98198 1209 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms