RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 ABCF2Q9UG63 623 aa23.24■■□□□ 1.31
LINC00888-201ENST00000468380 PNMA3Q9UL41 463 aa23.24■■□□□ 1.31
LINC00888-201ENST00000468380 TIMM10P62072 90 aa23.23■■□□□ 1.31
LINC00888-201ENST00000468380 HMX1Q9NP08 348 aaPredicted RBP23.23■■□□□ 1.31
LINC00888-201ENST00000468380 MTMR10Q9NXD2 777 aa23.23■■□□□ 1.31
LINC00888-201ENST00000468380 GPR75-ASB3A0A0A6YYF3 556 aa23.22■■□□□ 1.31
LINC00888-201ENST00000468380 GCLCP48506 637 aaPredicted RBP23.22■■□□□ 1.31
LINC00888-201ENST00000468380 HMGCS2P54868 508 aa23.22■■□□□ 1.31
LINC00888-201ENST00000468380 FAM9BQ8IZU0 186 aa23.22■■□□□ 1.31
LINC00888-201ENST00000468380 ASCC2Q9H1I8 757 aaPredicted RBP23.22■■□□□ 1.31
LINC00888-201ENST00000468380 C11orf49Q9H6J7 331 aa23.22■■□□□ 1.31
LINC00888-201ENST00000468380 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.22■■□□□ 1.31
LINC00888-201ENST00000468380 OGDHLQ9ULD0 1010 aa23.22■■□□□ 1.31
LINC00888-201ENST00000468380 STXBP5LQ9Y2K9 1186 aa23.22■■□□□ 1.31
LINC00888-201ENST00000468380 PEX10O60683 326 aa23.21■■□□□ 1.31
LINC00888-201ENST00000468380 IL15P40933 162 aaPredicted RBP23.21■■□□□ 1.31
LINC00888-201ENST00000468380 ZNF280CQ8ND82 737 aa23.21■■□□□ 1.31
LINC00888-201ENST00000468380 TRIB2Q92519 343 aa23.21■■□□□ 1.31
LINC00888-201ENST00000468380 OSBPL5Q9H0X9 879 aaPredicted RBP23.21■■□□□ 1.31
LINC00888-201ENST00000468380 MROH7-TTC4A0A0A0MT08 1334 aa23.21■■□□□ 1.31
LINC00888-201ENST00000468380 MECOMQ03112 1051 aa23.2■■□□□ 1.3
LINC00888-201ENST00000468380 SLF2Q8IX21 1173 aa23.2■■□□□ 1.3
LINC00888-201ENST00000468380 TDHQ8IZJ6 230 aa23.2■■□□□ 1.3
LINC00888-201ENST00000468380 PFASO15067 1338 aa23.19■■□□□ 1.3
LINC00888-201ENST00000468380 NPM3O75607 178 aaKnown RBP23.19■■□□□ 1.3
LINC00888-201ENST00000468380 MAP3K21Q5TCX8 1036 aa23.19■■□□□ 1.3
LINC00888-201ENST00000468380 PLXNB2O15031 1838 aa23.19■■□□□ 1.3
LINC00888-201ENST00000468380 PDS5AQ29RF7 1337 aaKnown RBP23.18■■□□□ 1.3
LINC00888-201ENST00000468380 UBTFL1P0CB47 393 aaPredicted RBP23.18■■□□□ 1.3
LINC00888-201ENST00000468380 CYP2B6P20813 491 aa23.18■■□□□ 1.3
LINC00888-201ENST00000468380 CAP2P40123 477 aa23.18■■□□□ 1.3
LINC00888-201ENST00000468380 SH3D19Q5HYK7 790 aa23.18■■□□□ 1.3
LINC00888-201ENST00000468380 SPTY2D1Q68D10 685 aaPredicted RBP23.18■■□□□ 1.3
LINC00888-201ENST00000468380 MORF4L1Q9UBU8 362 aa23.18■■□□□ 1.3
LINC00888-201ENST00000468380 DDX60LQ5H9U9 1706 aaKnown RBP23.18■■□□□ 1.3
LINC00888-201ENST00000468380 UNC80Q8N2C7 3258 aa23.17■■□□□ 1.3
LINC00888-201ENST00000468380 ERICH6Q7L0X2 663 aa23.17■■□□□ 1.3
LINC00888-201ENST00000468380 UBE2OQ9C0C9 1292 aaKnown RBP23.17■■□□□ 1.3
LINC00888-201ENST00000468380 COPRSQ9NQ92 184 aa23.17■■□□□ 1.3
LINC00888-201ENST00000468380 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.17■■□□□ 1.3
LINC00888-201ENST00000468380 USP17L5A8MUK1 530 aa23.16■■□□□ 1.3
LINC00888-201ENST00000468380 ANP32CO43423 234 aa23.16■■□□□ 1.3
LINC00888-201ENST00000468380 PABPC4Q13310 644 aaKnown RBP eCLIP23.16■■□□□ 1.3
LINC00888-201ENST00000468380 XAGE2Q96GT9 111 aa23.16■■□□□ 1.3
LINC00888-201ENST00000468380 P2RX7Q99572 595 aaKnown RBP23.16■■□□□ 1.3
LINC00888-201ENST00000468380 TXNRD2Q9NNW7 524 aa23.16■■□□□ 1.3
LINC00888-201ENST00000468380 LOC285556D6RIA3 1793 aa23.16■■□□□ 1.3
LINC00888-201ENST00000468380 COL6A1P12109 1028 aa23.15■■□□□ 1.3
LINC00888-201ENST00000468380 PRKAR2AP13861 404 aaKnown RBP23.15■■□□□ 1.3
LINC00888-201ENST00000468380 JAG1P78504 1218 aa23.15■■□□□ 1.3
LINC00888-201ENST00000468380 TBC1D9Q6ZT07 1266 aa23.15■■□□□ 1.3
LINC00888-201ENST00000468380 A0A1B0GUL7 405 aa23.14■■□□□ 1.29
LINC00888-201ENST00000468380 PI16Q6UXB8 463 aa23.14■■□□□ 1.29
LINC00888-201ENST00000468380 NSUN4Q96CB9 384 aaKnown RBP23.14■■□□□ 1.29
LINC00888-201ENST00000468380 TBC1D2Q9BYX2 928 aa23.14■■□□□ 1.29
LINC00888-201ENST00000468380 CACNB2Q08289 660 aaPredicted RBP23.13■■□□□ 1.29
LINC00888-201ENST00000468380 Q3C1V9 767 aa23.13■■□□□ 1.29
LINC00888-201ENST00000468380 LHX8Q68G74 356 aa23.13■■□□□ 1.29
LINC00888-201ENST00000468380 COL25A1Q9BXS0 654 aaPredicted RBP23.13■■□□□ 1.29
LINC00888-201ENST00000468380 HMG20BQ9P0W2 317 aa23.13■■□□□ 1.29
LINC00888-201ENST00000468380 XRCC5P13010 732 aaKnown RBP23.12■■□□□ 1.29
LINC00888-201ENST00000468380 HOXA7P31268 230 aaPredicted RBP23.12■■□□□ 1.29
LINC00888-201ENST00000468380 TFCP2Q12800 502 aa23.12■■□□□ 1.29
LINC00888-201ENST00000468380 MTMR2Q13614 643 aa23.12■■□□□ 1.29
LINC00888-201ENST00000468380 LRRC26Q2I0M4 334 aa23.12■■□□□ 1.29
LINC00888-201ENST00000468380 POTEEQ6S8J3 1075 aa23.12■■□□□ 1.29
LINC00888-201ENST00000468380 USP6NLQ92738 828 aa23.12■■□□□ 1.29
LINC00888-201ENST00000468380 NUDT12Q9BQG2 462 aa23.12■■□□□ 1.29
LINC00888-201ENST00000468380 WDR18Q9BV38 432 aa23.12■■□□□ 1.29
LINC00888-201ENST00000468380 RBPJLQ9UBG7 517 aa23.12■■□□□ 1.29
LINC00888-201ENST00000468380 CCND3P30281 292 aaPredicted RBP23.11■■□□□ 1.29
LINC00888-201ENST00000468380 BACE1P56817 501 aa23.11■■□□□ 1.29
LINC00888-201ENST00000468380 MDM2Q00987 491 aaPredicted RBP23.11■■□□□ 1.29
LINC00888-201ENST00000468380 SHROOM1Q2M3G4 852 aaPredicted RBP23.11■■□□□ 1.29
LINC00888-201ENST00000468380 ALDH1L2Q3SY69 923 aa23.11■■□□□ 1.29
LINC00888-201ENST00000468380 GPRC5AQ8NFJ5 357 aa23.11■■□□□ 1.29
LINC00888-201ENST00000468380 ATAD5Q96QE3 1844 aa23.1■■□□□ 1.29
LINC00888-201ENST00000468380 E9PSI1 815 aa23.1■■□□□ 1.29
LINC00888-201ENST00000468380 MAP4K4O95819 1239 aaPredicted RBP23.1■■□□□ 1.29
LINC00888-201ENST00000468380 LDHCP07864 332 aa23.1■■□□□ 1.29
LINC00888-201ENST00000468380 IRX3P78415 501 aaPredicted RBP23.1■■□□□ 1.29
LINC00888-201ENST00000468380 SLFN5Q08AF3 891 aa23.1■■□□□ 1.29
LINC00888-201ENST00000468380 CCL14Q16627 93 aa23.1■■□□□ 1.29
LINC00888-201ENST00000468380 MEIS3Q99687 375 aa23.1■■□□□ 1.29
LINC00888-201ENST00000468380 AS3MTQ9HBK9 375 aa23.1■■□□□ 1.29
LINC00888-201ENST00000468380 SMC4Q9NTJ3 1288 aa23.1■■□□□ 1.29
LINC00888-201ENST00000468380 HERC5Q9UII4 1024 aaKnown RBP23.1■■□□□ 1.29
LINC00888-201ENST00000468380 COL2A1P02458 1487 aaPredicted RBP23.1■■□□□ 1.29
LINC00888-201ENST00000468380 LAMA2P24043 3122 aaKnown RBP23.09■■□□□ 1.29
LINC00888-201ENST00000468380 POTEB2H3BUK9 544 aa23.09■■□□□ 1.29
LINC00888-201ENST00000468380 HERVK_113P62684 666 aa23.09■■□□□ 1.29
LINC00888-201ENST00000468380 MVPQ14764 893 aaKnown RBP23.09■■□□□ 1.29
LINC00888-201ENST00000468380 SPATA5Q8NB90 893 aa23.09■■□□□ 1.29
LINC00888-201ENST00000468380 SH3RF3Q8TEJ3 882 aaPredicted RBP23.09■■□□□ 1.29
LINC00888-201ENST00000468380 PORCNQ9H237 461 aa23.09■■□□□ 1.29
LINC00888-201ENST00000468380 GSTO1P78417 241 aa23.08■■□□□ 1.29
LINC00888-201ENST00000468380 MORN1Q5T089 497 aa23.08■■□□□ 1.29
LINC00888-201ENST00000468380 TEX11Q8IYF3 940 aa23.08■■□□□ 1.29
LINC00888-201ENST00000468380 NEUROD6Q96NK8 337 aa23.08■■□□□ 1.29
LINC00888-201ENST00000468380 GUCD1Q96NT3 240 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms