RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 USP17L21D6R901 530 aa17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 CYP2D6P10635 497 aa17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 PLCD1P51178 756 aa17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 CTR9Q6PD62 1173 aa17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 PAXIP1Q6ZW49 1069 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 METTL16Q86W50 562 aaKnown RBP17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 AMOTL1Q8IY63 956 aa17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 IFNL3Q8IZI9 196 aa17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 CRACR2BQ8N4Y2 399 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 RUFY2Q8WXA3 655 aa17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 TRIM34Q9BYJ4 488 aa17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 NACAP1Q9BZK3 213 aa17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 EPB41L4AQ9HCS5 686 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-208ENST00000466601 NAV1Q8NEY1 1877 aa17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 PHF20L1A8MW92 1017 aa17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 TDO2P48775 406 aa17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 ZNF157P51786 506 aaPredicted RBP17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 SBK1Q52WX2 424 aa17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 VPS53Q5VIR6 699 aa17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 EHD4Q9H223 541 aa17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 ARPP21Q9UBL0 812 aaPredicted RBP17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 SERPINB13Q9UIV8 391 aa17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 GTF3C3Q9Y5Q9 886 aa17.29■□□□□ 0.36
DNMT3A-208ENST00000466601 DDX60LQ5H9U9 1706 aaKnown RBP17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 FOXP2O15409 715 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 HSPD1P10809 573 aaKnown RBP17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 INPP5BP32019 993 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 EVX2Q03828 476 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 VGLL4Q14135 290 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 C12orf60Q5U649 245 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 CYP4F22Q6NT55 531 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 ZKSCAN4Q969J2 545 aaPredicted RBP17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 SLC10A4Q96EP9 437 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 CLMNQ96JQ2 1002 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 NAPBQ9H115 298 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 DNAJC18Q9H819 358 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 CSADQ9Y600 493 aa17.28■□□□□ 0.36
DNMT3A-208ENST00000466601 RAD50Q92878 1312 aa17.27■□□□□ 0.36
DNMT3A-208ENST00000466601 SIPA1L1O43166 1804 aa17.27■□□□□ 0.36
DNMT3A-208ENST00000466601 CYP2D7A0A087X1C5 515 aa17.27■□□□□ 0.36
DNMT3A-208ENST00000466601 ECE1P42892 770 aa17.27■□□□□ 0.36
DNMT3A-208ENST00000466601 ALX1Q15699 326 aa17.27■□□□□ 0.36
DNMT3A-208ENST00000466601 CCDC102AQ96A19 550 aa17.27■□□□□ 0.36
DNMT3A-208ENST00000466601 CAPNS2Q96L46 248 aa17.27■□□□□ 0.36
DNMT3A-208ENST00000466601 IL25Q9H293 177 aa17.27■□□□□ 0.36
DNMT3A-208ENST00000466601 BAZ2AQ9UIF9 1905 aaKnown RBP17.27■□□□□ 0.35
DNMT3A-208ENST00000466601 MINDY4BA8MYZ0 360 aa17.26■□□□□ 0.35
DNMT3A-208ENST00000466601 CTNND1O60716 968 aaKnown RBP17.26■□□□□ 0.35
DNMT3A-208ENST00000466601 VEGFBP49765 207 aa17.26■□□□□ 0.35
DNMT3A-208ENST00000466601 GABPAQ06546 454 aa17.26■□□□□ 0.35
DNMT3A-208ENST00000466601 GRM1Q13255 1194 aa17.26■□□□□ 0.35
DNMT3A-208ENST00000466601 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
DNMT3A-208ENST00000466601 ELP3Q9H9T3 547 aa17.26■□□□□ 0.35
DNMT3A-208ENST00000466601 SNCAIPQ9Y6H5 919 aa17.26■□□□□ 0.35
DNMT3A-208ENST00000466601 SMIM22K7EJ46 135 aa17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 SGSM2O43147 1006 aa17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 CDC45O75419 566 aa17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 SLC10A3P09131 477 aa17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 RRP1BQ14684 758 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 TATDN1Q6P1N9 297 aa17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 RASAL3Q86YV0 1011 aa17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 SCYL3Q8IZE3 742 aa17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 DNAJC5GQ8N7S2 189 aa17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 DYNLL2Q96FJ2 89 aa17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
DNMT3A-208ENST00000466601 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
DNMT3A-208ENST00000466601 FAM155AB1AL88 458 aaPredicted RBP17.24■□□□□ 0.35
DNMT3A-208ENST00000466601 FGAP02671 866 aa17.24■□□□□ 0.35
DNMT3A-208ENST00000466601 CAP2P40123 477 aa17.24■□□□□ 0.35
DNMT3A-208ENST00000466601 CASC1Q6TDU7 716 aa17.24■□□□□ 0.35
DNMT3A-208ENST00000466601 DSCC1Q9BVC3 393 aa17.24■□□□□ 0.35
DNMT3A-208ENST00000466601 SWAP70Q9UH65 585 aa17.24■□□□□ 0.35
DNMT3A-208ENST00000466601 OTOFQ9HC10 1997 aa17.24■□□□□ 0.35
DNMT3A-208ENST00000466601 SHMT1P34896 483 aa17.23■□□□□ 0.35
DNMT3A-208ENST00000466601 CDK8P49336 464 aa17.23■□□□□ 0.35
DNMT3A-208ENST00000466601 PPARAQ07869 468 aa17.23■□□□□ 0.35
DNMT3A-208ENST00000466601 SPRYD7Q5W111 196 aa17.23■□□□□ 0.35
DNMT3A-208ENST00000466601 C16orf86Q6ZW13 317 aa17.23■□□□□ 0.35
DNMT3A-208ENST00000466601 SLC44A5Q8NCS7 719 aa17.23■□□□□ 0.35
DNMT3A-208ENST00000466601 OPTNQ96CV9 577 aa17.23■□□□□ 0.35
DNMT3A-208ENST00000466601 WNK4Q96J92 1243 aa17.23■□□□□ 0.35
DNMT3A-208ENST00000466601 ESYT1Q9BSJ8 1104 aa17.23■□□□□ 0.35
DNMT3A-208ENST00000466601 PICK1Q9NRD5 415 aa17.23■□□□□ 0.35
DNMT3A-208ENST00000466601 SPDYE5A6NIY4 337 aa17.22■□□□□ 0.35
DNMT3A-208ENST00000466601 MKRN3Q13064 507 aaKnown RBP17.22■□□□□ 0.35
DNMT3A-208ENST00000466601 NOGQ13253 232 aa17.22■□□□□ 0.35
DNMT3A-208ENST00000466601 CERKLQ49MI3 558 aaPredicted RBP17.22■□□□□ 0.35
DNMT3A-208ENST00000466601 ERO1BQ86YB8 467 aa17.22■□□□□ 0.35
DNMT3A-208ENST00000466601 STK11IPQ8N1F8 1099 aa17.22■□□□□ 0.35
DNMT3A-208ENST00000466601 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
DNMT3A-208ENST00000466601 ZMYM6O95789 1325 aa17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 ROBO3Q96MS0 1386 aa17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 AOC2O75106 756 aa17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 GDF11O95390 407 aa17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 SLC3A2P08195 630 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 ZBTB48P10074 688 aaPredicted RBP17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 PTPRAP18433 802 aa17.21■□□□□ 0.35
DNMT3A-208ENST00000466601 GJA5P36382 358 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 662.3 ms