RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 WDR33Q9C0J8 1336 aaKnown RBP22.05■■□□□ 1.12
HOXA9-203ENST00000465941 FAM155AB1AL88 458 aaPredicted RBP22.04■■□□□ 1.12
HOXA9-203ENST00000465941 SLURP2P0DP57 97 aa22.04■■□□□ 1.12
HOXA9-203ENST00000465941 PLCD1P51178 756 aa22.04■■□□□ 1.12
HOXA9-203ENST00000465941 VGLL4Q14135 290 aa22.04■■□□□ 1.12
HOXA9-203ENST00000465941 CCDC129Q6ZRS4 1044 aa22.04■■□□□ 1.12
HOXA9-203ENST00000465941 PAXIP1Q6ZW49 1069 aaPredicted RBP22.04■■□□□ 1.12
HOXA9-203ENST00000465941 TAOK2Q9UL54 1235 aa22.04■■□□□ 1.12
HOXA9-203ENST00000465941 CSADQ9Y600 493 aa22.04■■□□□ 1.12
HOXA9-203ENST00000465941 USP17L12C9JPN9 530 aa22.03■■□□□ 1.12
HOXA9-203ENST00000465941 USP17L21D6R901 530 aa22.03■■□□□ 1.12
HOXA9-203ENST00000465941 CTNND1O60716 968 aaKnown RBP22.03■■□□□ 1.12
HOXA9-203ENST00000465941 SLC10A3P09131 477 aa22.03■■□□□ 1.12
HOXA9-203ENST00000465941 INPP5BP32019 993 aa22.03■■□□□ 1.12
HOXA9-203ENST00000465941 C12orf60Q5U649 245 aa22.03■■□□□ 1.12
HOXA9-203ENST00000465941 CTR9Q6PD62 1173 aa22.03■■□□□ 1.12
HOXA9-203ENST00000465941 CWC27Q6UX04 472 aaKnown RBP22.03■■□□□ 1.12
HOXA9-203ENST00000465941 RASAL3Q86YV0 1011 aa22.03■■□□□ 1.12
HOXA9-203ENST00000465941 CRACR2BQ8N4Y2 399 aaPredicted RBP22.03■■□□□ 1.12
HOXA9-203ENST00000465941 ZKSCAN4Q969J2 545 aaPredicted RBP22.03■■□□□ 1.12
HOXA9-203ENST00000465941 NACAP1Q9BZK3 213 aa22.03■■□□□ 1.12
HOXA9-203ENST00000465941 SERPINB13Q9UIV8 391 aa22.03■■□□□ 1.12
HOXA9-203ENST00000465941 FAM196BA6NMK8 535 aa22.02■■□□□ 1.12
HOXA9-203ENST00000465941 APPP05067 770 aa22.02■■□□□ 1.12
HOXA9-203ENST00000465941 CHMLP26374 656 aa22.02■■□□□ 1.12
HOXA9-203ENST00000465941 MFAP1P55081 439 aaKnown RBP22.02■■□□□ 1.12
HOXA9-203ENST00000465941 SLC4A8Q2Y0W8 1093 aa22.02■■□□□ 1.12
HOXA9-203ENST00000465941 SBK1Q52WX2 424 aa22.02■■□□□ 1.12
HOXA9-203ENST00000465941 NOL9Q5SY16 702 aaKnown RBP22.02■■□□□ 1.12
HOXA9-203ENST00000465941 AMOTL1Q8IY63 956 aa22.02■■□□□ 1.12
HOXA9-203ENST00000465941 IFNL3Q8IZI9 196 aa22.02■■□□□ 1.12
HOXA9-203ENST00000465941 TRIM34Q9BYJ4 488 aa22.02■■□□□ 1.12
HOXA9-203ENST00000465941 DNAJC18Q9H819 358 aa22.02■■□□□ 1.12
HOXA9-203ENST00000465941 AK9Q5TCS8 1911 aa22.02■■□□□ 1.11
HOXA9-203ENST00000465941 FOXP2O15409 715 aa22.01■■□□□ 1.11
HOXA9-203ENST00000465941 GABPAQ06546 454 aa22.01■■□□□ 1.11
HOXA9-203ENST00000465941 ZNF589Q86UQ0 364 aaPredicted RBP22.01■■□□□ 1.11
HOXA9-203ENST00000465941 EPB41L4AQ9HCS5 686 aaPredicted RBP22.01■■□□□ 1.11
HOXA9-203ENST00000465941 ARPP21Q9UBL0 812 aaPredicted RBP22.01■■□□□ 1.11
HOXA9-203ENST00000465941 SNCAIPQ9Y6H5 919 aa22.01■■□□□ 1.11
HOXA9-203ENST00000465941 CCDC171Q6TFL3 1326 aa22.01■■□□□ 1.11
HOXA9-203ENST00000465941 DDX60LQ5H9U9 1706 aaKnown RBP22■■□□□ 1.11
HOXA9-203ENST00000465941 CYP2D6P10635 497 aa22■■□□□ 1.11
HOXA9-203ENST00000465941 MAP2K2P36507 400 aa22■■□□□ 1.11
HOXA9-203ENST00000465941 NOGQ13253 232 aa22■■□□□ 1.11
HOXA9-203ENST00000465941 TATDN1Q6P1N9 297 aa22■■□□□ 1.11
HOXA9-203ENST00000465941 ELP3Q9H9T3 547 aa22■■□□□ 1.11
HOXA9-203ENST00000465941 HSPD1P10809 573 aaKnown RBP21.99■■□□□ 1.11
HOXA9-203ENST00000465941 TDO2P48775 406 aa21.99■■□□□ 1.11
HOXA9-203ENST00000465941 EVX2Q03828 476 aa21.99■■□□□ 1.11
HOXA9-203ENST00000465941 GRM1Q13255 1194 aa21.99■■□□□ 1.11
HOXA9-203ENST00000465941 ALX1Q15699 326 aa21.99■■□□□ 1.11
HOXA9-203ENST00000465941 VPS53Q5VIR6 699 aa21.99■■□□□ 1.11
HOXA9-203ENST00000465941 SPRYD7Q5W111 196 aa21.99■■□□□ 1.11
HOXA9-203ENST00000465941 SCYL3Q8IZE3 742 aa21.99■■□□□ 1.11
HOXA9-203ENST00000465941 RUFY2Q8WXA3 655 aa21.99■■□□□ 1.11
HOXA9-203ENST00000465941 MYH1P12882 1939 aa21.99■■□□□ 1.11
HOXA9-203ENST00000465941 CYP2D7A0A087X1C5 515 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 SPDYE5A6NIY4 337 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 ZBTB48P10074 688 aaPredicted RBP21.98■■□□□ 1.11
HOXA9-203ENST00000465941 CAP2P40123 477 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 RRP1BQ14684 758 aaKnown RBP21.98■■□□□ 1.11
HOXA9-203ENST00000465941 ERO1BQ86YB8 467 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 JMYQ8N9B5 988 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 OPTNQ96CV9 577 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 WNK4Q96J92 1243 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 NAPBQ9H115 298 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 SWAP70Q9UH65 585 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 SIPA1L1O43166 1804 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 NAV1Q8NEY1 1877 aa21.98■■□□□ 1.11
HOXA9-203ENST00000465941 AOC2O75106 756 aa21.97■■□□□ 1.11
HOXA9-203ENST00000465941 PICK1Q9NRD5 415 aa21.97■■□□□ 1.11
HOXA9-203ENST00000465941 GINM1Q9NU53 330 aa21.97■■□□□ 1.11
HOXA9-203ENST00000465941 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.97■■□□□ 1.11
HOXA9-203ENST00000465941 RAD50Q92878 1312 aa21.97■■□□□ 1.11
HOXA9-203ENST00000465941 CEP350Q5VT06 3117 aa21.96■■□□□ 1.11
HOXA9-203ENST00000465941 SMIM22K7EJ46 135 aa21.96■■□□□ 1.11
HOXA9-203ENST00000465941 PTPRAP18433 802 aa21.96■■□□□ 1.11
HOXA9-203ENST00000465941 SHMT1P34896 483 aa21.96■■□□□ 1.11
HOXA9-203ENST00000465941 GJA5P36382 358 aa21.96■■□□□ 1.11
HOXA9-203ENST00000465941 PPATQ06203 517 aa21.96■■□□□ 1.11
HOXA9-203ENST00000465941 OTOFQ9HC10 1997 aa21.96■■□□□ 1.11
HOXA9-203ENST00000465941 MINDY4BA8MYZ0 360 aa21.95■■□□□ 1.1
HOXA9-203ENST00000465941 FGAP02671 866 aa21.95■■□□□ 1.1
HOXA9-203ENST00000465941 KIF23Q02241 960 aaPredicted RBP21.95■■□□□ 1.1
HOXA9-203ENST00000465941 C16orf86Q6ZW13 317 aa21.95■■□□□ 1.1
HOXA9-203ENST00000465941 REM2Q8IYK8 340 aaPredicted RBP21.95■■□□□ 1.1
HOXA9-203ENST00000465941 CNKSR2Q8WXI2 1034 aa21.95■■□□□ 1.1
HOXA9-203ENST00000465941 DYNLL2Q96FJ2 89 aa21.95■■□□□ 1.1
HOXA9-203ENST00000465941 ZIC5Q96T25 663 aa21.95■■□□□ 1.1
HOXA9-203ENST00000465941 IL25Q9H293 177 aa21.95■■□□□ 1.1
HOXA9-203ENST00000465941 CDK8P49336 464 aa21.94■■□□□ 1.1
HOXA9-203ENST00000465941 CERKLQ49MI3 558 aaPredicted RBP21.94■■□□□ 1.1
HOXA9-203ENST00000465941 OTUD5Q96G74 571 aa21.94■■□□□ 1.1
HOXA9-203ENST00000465941 DSCC1Q9BVC3 393 aa21.94■■□□□ 1.1
HOXA9-203ENST00000465941 ZMYM6O95789 1325 aa21.94■■□□□ 1.1
HOXA9-203ENST00000465941 SGSM2O43147 1006 aa21.93■■□□□ 1.1
HOXA9-203ENST00000465941 ASNSP08243 561 aa21.93■■□□□ 1.1
HOXA9-203ENST00000465941 JAG1P78504 1218 aa21.93■■□□□ 1.1
HOXA9-203ENST00000465941 MKRN3Q13064 507 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms