RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 USP17L15C9J2P7 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L10C9JJH3 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L13C9JLJ4 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L12C9JPN9 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L11C9JVI0 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L21D6R901 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L18D6R9N7 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L22D6RA61 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L17D6RBQ6 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L19D6RCP7 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L20D6RJB6 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 CYP2E1P05181 493 aaPredicted RBP4.56□□□□□ -1.68
CD46-210ENST00000462968 ZNF865P0CJ78 1059 aaPredicted RBP4.56□□□□□ -1.68
CD46-210ENST00000462968 USP17L24Q0WX57 530 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 NFKBIBQ15653 356 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 PKN1Q16512 942 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 ZNF792Q3KQV3 632 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 TTC39BQ5VTQ0 682 aaPredicted RBP4.56□□□□□ -1.68
CD46-210ENST00000462968 NUTM2GQ5VZR2 741 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 CDPF1Q6NVV7 123 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 FAM196AQ6ZSG2 479 aa4.56□□□□□ -1.68
CD46-210ENST00000462968 C12orf50Q8NA57 414 aaPredicted RBP4.56□□□□□ -1.68
CD46-210ENST00000462968 EZH1Q92800 747 aaPredicted RBP4.56□□□□□ -1.68
CD46-210ENST00000462968 COL22A1Q8NFW1 1626 aaPredicted RBP4.55□□□□□ -1.68
CD46-210ENST00000462968 EIF2AK4Q9P2K8 1649 aaKnown RBP4.55□□□□□ -1.68
CD46-210ENST00000462968 FAM177BA6PVY3 158 aa4.55□□□□□ -1.68
CD46-210ENST00000462968 NFKBIEO00221 500 aa4.55□□□□□ -1.68
CD46-210ENST00000462968 CABP4P57796 275 aa4.55□□□□□ -1.68
CD46-210ENST00000462968 TMEM132AQ24JP5 1023 aa4.55□□□□□ -1.68
CD46-210ENST00000462968 HGSNATQ68CP4 663 aa4.55□□□□□ -1.68
CD46-210ENST00000462968 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
CD46-210ENST00000462968 C2CD4AQ8NCU7 369 aaPredicted RBP4.55□□□□□ -1.68
CD46-210ENST00000462968 FBLIM1Q8WUP2 373 aa4.55□□□□□ -1.68
CD46-210ENST00000462968 BCL7CQ8WUZ0 217 aaPredicted RBP4.55□□□□□ -1.68
CD46-210ENST00000462968 TBC1D32Q96NH3 1257 aa4.55□□□□□ -1.68
CD46-210ENST00000462968 ABI2Q9NYB9 513 aaPredicted RBP4.55□□□□□ -1.68
CD46-210ENST00000462968 CEP162Q5TB80 1403 aa4.55□□□□□ -1.68
CD46-210ENST00000462968 LRPPRCP42704 1394 aaKnown RBP4.54□□□□□ -1.68
CD46-210ENST00000462968 NCANO14594 1321 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 A6NJR5 290 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 DLGAP3O95886 979 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 XPCQ01831 940 aaPredicted RBP4.54□□□□□ -1.68
CD46-210ENST00000462968 MESP2Q0VG99 397 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 PLCL1Q15111 1095 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 GPR162Q16538 588 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 ATG4DQ86TL0 474 aaPredicted RBP4.54□□□□□ -1.68
CD46-210ENST00000462968 NCAPG2Q86XI2 1143 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 KSR1Q8IVT5 923 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 GLIS3Q8NEA6 775 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 BHLHE22Q8NFJ8 381 aaPredicted RBP4.54□□□□□ -1.68
CD46-210ENST00000462968 SLC7A3Q8WY07 619 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 PIK3R5Q8WYR1 880 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 CYP4F12Q9HCS2 524 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 SOX13Q9UN79 622 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 DUOX2Q9NRD8 1548 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 ERBINQ96RT1 1412 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 LAMC1P11047 1609 aa4.54□□□□□ -1.68
CD46-210ENST00000462968 SPATA31A3Q5VYP0 1347 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 LMTK2Q8IWU2 1503 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 LOC100289279A0A1B0GTE1 492 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 PRRG2O14669 202 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 RAD21O60216 631 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 ZBTB7AO95365 584 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 DRD2P14416 443 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 BRD2P25440 801 aaKnown RBP4.53□□□□□ -1.68
CD46-210ENST00000462968 C19orf57Q0VDD7 668 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 FKBP5Q13451 457 aaPredicted RBP4.53□□□□□ -1.68
CD46-210ENST00000462968 ZNF574Q6ZN55 896 aaPredicted RBP4.53□□□□□ -1.68
CD46-210ENST00000462968 SPRED2Q7Z698 418 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 TMEM40Q8WWA1 233 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 FAM168AQ92567 244 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 SAP130Q9H0E3 1048 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 RRP7BPQ9NSQ0 103 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 SLC5A6Q9Y289 635 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 CAMTA1Q9Y6Y1 1673 aa4.53□□□□□ -1.68
CD46-210ENST00000462968 ARHGEF5Q12774 1597 aa4.53□□□□□ -1.69
CD46-210ENST00000462968 METP08581 1390 aa4.53□□□□□ -1.69
CD46-210ENST00000462968 KIF15Q9NS87 1388 aa4.53□□□□□ -1.69
CD46-210ENST00000462968 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.52□□□□□ -1.69
CD46-210ENST00000462968 ADGRL2O95490 1459 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 PXDNQ92626 1479 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 TNFRSF10BO14763 440 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 USP11P51784 963 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 DUSP27Q5VZP5 1158 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 LILRA6Q6PI73 481 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 ZNF765Q7L2R6 523 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 DNAJC5GQ8N7S2 189 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 LRRC4CQ9HCJ2 640 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 FAM13BQ9NYF5 915 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 SALL4Q9UJQ4 1053 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 FNDC3AQ9Y2H6 1198 aaKnown RBP4.52□□□□□ -1.69
CD46-210ENST00000462968 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.52□□□□□ -1.69
CD46-210ENST00000462968 ADGRB2O60241 1585 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 CEP152O94986 1710 aa4.52□□□□□ -1.69
CD46-210ENST00000462968 BRWD3Q6RI45 1802 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 SPATA31A5Q5VU36 1347 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 SPATA31A7Q8IWB4 1347 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 SOX1O00570 391 aaPredicted RBP4.51□□□□□ -1.69
CD46-210ENST00000462968 ACPPP15309 386 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 ARL4DP49703 201 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms