RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 JMYQ8N9B5 988 aa16.26■□□□□ 0.19
SCFD1-203ENST00000458591 KRI1Q8N9T8 703 aaKnown RBP16.26■□□□□ 0.19
SCFD1-203ENST00000458591 COBLO75128 1261 aa16.25■□□□□ 0.19
SCFD1-203ENST00000458591 ZNF771Q7L3S4 317 aaPredicted RBP16.25■□□□□ 0.19
SCFD1-203ENST00000458591 ZNF512BQ96KM6 892 aaPredicted RBP16.25■□□□□ 0.19
SCFD1-203ENST00000458591 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.25■□□□□ 0.19
SCFD1-203ENST00000458591 SAMSN1Q9NSI8 373 aaKnown RBP16.25■□□□□ 0.19
SCFD1-203ENST00000458591 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
SCFD1-203ENST00000458591 SLC4A4Q9Y6R1 1079 aa16.25■□□□□ 0.19
SCFD1-203ENST00000458591 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
SCFD1-203ENST00000458591 ABCC12Q96J65 1359 aa16.25■□□□□ 0.19
SCFD1-203ENST00000458591 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
SCFD1-203ENST00000458591 FAM237AA0A1B0GTK4 181 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 MMP1P03956 469 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 SLFN14P0C7P3 912 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 TDO2P48775 406 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 ETF1P62495 437 aaKnown RBP16.24■□□□□ 0.19
SCFD1-203ENST00000458591 PUM3Q15397 648 aaKnown RBP16.24■□□□□ 0.19
SCFD1-203ENST00000458591 AKNAD1Q5T1N1 836 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 MFSD6Q6ZSS7 791 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 ADGRA1Q86SQ6 560 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 DZIP3Q86Y13 1208 aaKnown RBP16.24■□□□□ 0.19
SCFD1-203ENST00000458591 LPIN2Q92539 896 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 ATRNO75882 1429 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 DCCP43146 1447 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 URI1O94763 535 aaPredicted RBP16.24■□□□□ 0.19
SCFD1-203ENST00000458591 ARHGAP29Q52LW3 1261 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 NOM1Q5C9Z4 860 aaKnown RBP16.24■□□□□ 0.19
SCFD1-203ENST00000458591 EARS2Q5JPH6 523 aaKnown RBP16.24■□□□□ 0.19
SCFD1-203ENST00000458591 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 TOGARAM2Q6ZUX3 1019 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 SDR42E1Q8WUS8 393 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 NFE2L3Q9Y4A8 694 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 SHANK3Q9BYB0 1731 aa16.24■□□□□ 0.19
SCFD1-203ENST00000458591 VWA3AA6NCI4 1184 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 WNT7AO00755 349 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 PRDM1O75626 825 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 CLCN6P51797 869 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 DESI2Q9BSY9 194 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 CABP5Q9NP86 173 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 SLIT2O94813 1529 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 CYP2D7A0A087X1C5 515 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 A0A0U1RQJ8 604 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 IFNAR1P17181 557 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 LIFRP42702 1097 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 POSTNQ15063 836 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 RTN1Q16799 776 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 ATRIPQ8WXE1 791 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 CARD6Q9BX69 1037 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 TEX13AQ9BXU3 409 aaPredicted RBP16.23■□□□□ 0.19
SCFD1-203ENST00000458591 BTG4Q9NY30 223 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
SCFD1-203ENST00000458591 A0A087X0B3 334 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 MINDY4BA8MYZ0 360 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 UQCRFS1P1P0C7P4 283 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 EVX2Q03828 476 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 MTF1Q14872 753 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 WTAPQ15007 396 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 KRT222Q8N1A0 295 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 ZBTB9Q96C00 473 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 WDR24Q96S15 920 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 CSRNP2Q9H175 543 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 SLAIN2Q9P270 581 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 SEC31AO94979 1220 aaKnown RBP16.22■□□□□ 0.19
SCFD1-203ENST00000458591 H2AFXP16104 143 aaPredicted RBP16.22■□□□□ 0.19
SCFD1-203ENST00000458591 CDK11BP21127 795 aaKnown RBP16.22■□□□□ 0.19
SCFD1-203ENST00000458591 STX17P56962 302 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 DHX8Q14562 1220 aaKnown RBP16.22■□□□□ 0.19
SCFD1-203ENST00000458591 FAM53CQ9NYF3 392 aa16.22■□□□□ 0.19
SCFD1-203ENST00000458591 SOS2Q07890 1332 aaPredicted RBP16.22■□□□□ 0.19
SCFD1-203ENST00000458591 MYH7P12883 1935 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 CBFA2T2O43439 604 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 PTPREP23469 700 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 AFMP43652 599 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 ALX1Q15699 326 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 CRACR2BQ8N4Y2 399 aaPredicted RBP16.21■□□□□ 0.19
SCFD1-203ENST00000458591 STAMQ92783 540 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 EPSTI1Q96J88 318 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 IRX2Q9BZI1 471 aaPredicted RBP16.21■□□□□ 0.19
SCFD1-203ENST00000458591 PPP2R2CQ9Y2T4 447 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 NRDCO43847 1150 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 SMYD4Q8IYR2 804 aaPredicted RBP16.21■□□□□ 0.19
SCFD1-203ENST00000458591 TC2NQ8N9U0 490 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 VPS54Q9P1Q0 977 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 PARP3Q9Y6F1 533 aa16.21■□□□□ 0.19
SCFD1-203ENST00000458591 ECM29Q5VYK3 1845 aa16.2■□□□□ 0.18
SCFD1-203ENST00000458591 TEX33O43247 280 aa16.2■□□□□ 0.18
SCFD1-203ENST00000458591 SLC5A1P13866 664 aa16.2■□□□□ 0.18
SCFD1-203ENST00000458591 TBX2Q13207 712 aaPredicted RBP16.2■□□□□ 0.18
SCFD1-203ENST00000458591 KARSQ15046 597 aaKnown RBP16.2■□□□□ 0.18
SCFD1-203ENST00000458591 TAF3Q5VWG9 929 aa16.2■□□□□ 0.18
SCFD1-203ENST00000458591 KLHL10Q6JEL2 608 aa16.2■□□□□ 0.18
SCFD1-203ENST00000458591 DHX58Q96C10 678 aa16.2■□□□□ 0.18
SCFD1-203ENST00000458591 MPHOSPH8Q99549 860 aa16.2■□□□□ 0.18
SCFD1-203ENST00000458591 KCNJ6P48051 423 aa16.2■□□□□ 0.18
SCFD1-203ENST00000458591 SAFBQ15424 915 aaKnown RBP eCLIP16.2■□□□□ 0.18
SCFD1-203ENST00000458591 ZNF34Q8IZ26 560 aa16.2■□□□□ 0.18
SCFD1-203ENST00000458591 FHOD1Q9Y613 1164 aa16.2■□□□□ 0.18
SCFD1-203ENST00000458591 ACTN4O43707 911 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms