RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 PAXIP1Q6ZW49 1069 aaPredicted RBP17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 IFNL3Q8IZI9 196 aa17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 SLC10A4Q96EP9 437 aa17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 ARPP21Q9UBL0 812 aaPredicted RBP17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 CSADQ9Y600 493 aa17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 RASSF10A6NK89 507 aa17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 PLCD1P51178 756 aa17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 ZNF157P51786 506 aaPredicted RBP17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 SBK1Q52WX2 424 aa17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 RGMBQ6NW40 437 aa17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 NAPBQ9H115 298 aa17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 EHD4Q9H223 541 aa17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 SERPINB13Q9UIV8 391 aa17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 ZNF112Q9UJU3 913 aa17.46■□□□□ 0.39
NCKIPSD-207ENST00000453349 MYH1P12882 1939 aa17.45■□□□□ 0.38
NCKIPSD-207ENST00000453349 MINDY4BA8MYZ0 360 aa17.45■□□□□ 0.38
NCKIPSD-207ENST00000453349 HSPD1P10809 573 aaKnown RBP17.45■□□□□ 0.38
NCKIPSD-207ENST00000453349 C12orf60Q5U649 245 aa17.45■□□□□ 0.38
NCKIPSD-207ENST00000453349 ZNF589Q86UQ0 364 aaPredicted RBP17.45■□□□□ 0.38
NCKIPSD-207ENST00000453349 METTL16Q86W50 562 aaKnown RBP17.45■□□□□ 0.38
NCKIPSD-207ENST00000453349 CCDC102AQ96A19 550 aa17.45■□□□□ 0.38
NCKIPSD-207ENST00000453349 RAD50Q92878 1312 aa17.45■□□□□ 0.38
NCKIPSD-207ENST00000453349 PHF20L1A8MW92 1017 aa17.44■□□□□ 0.38
NCKIPSD-207ENST00000453349 ECE1P42892 770 aa17.44■□□□□ 0.38
NCKIPSD-207ENST00000453349 VPS53Q5VIR6 699 aa17.44■□□□□ 0.38
NCKIPSD-207ENST00000453349 ZKSCAN4Q969J2 545 aaPredicted RBP17.44■□□□□ 0.38
NCKIPSD-207ENST00000453349 TAOK2Q9UL54 1235 aa17.44■□□□□ 0.38
NCKIPSD-207ENST00000453349 NAV1Q8NEY1 1877 aa17.44■□□□□ 0.38
NCKIPSD-207ENST00000453349 FAM196BA6NMK8 535 aa17.43■□□□□ 0.38
NCKIPSD-207ENST00000453349 CTNND1O60716 968 aaKnown RBP17.43■□□□□ 0.38
NCKIPSD-207ENST00000453349 CDC45O75419 566 aa17.43■□□□□ 0.38
NCKIPSD-207ENST00000453349 SLURP2P0DP57 97 aa17.43■□□□□ 0.38
NCKIPSD-207ENST00000453349 CYP2D6P10635 497 aa17.43■□□□□ 0.38
NCKIPSD-207ENST00000453349 ALX1Q15699 326 aa17.43■□□□□ 0.38
NCKIPSD-207ENST00000453349 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-207ENST00000453349 EPB41L4AQ9HCS5 686 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-207ENST00000453349 SWAP70Q9UH65 585 aa17.43■□□□□ 0.38
NCKIPSD-207ENST00000453349 CYP2D7A0A087X1C5 515 aa17.42■□□□□ 0.38
NCKIPSD-207ENST00000453349 SLC3A2P08195 630 aaKnown RBP17.42■□□□□ 0.38
NCKIPSD-207ENST00000453349 INPP5BP32019 993 aa17.42■□□□□ 0.38
NCKIPSD-207ENST00000453349 GRM1Q13255 1194 aa17.42■□□□□ 0.38
NCKIPSD-207ENST00000453349 VGLL4Q14135 290 aa17.42■□□□□ 0.38
NCKIPSD-207ENST00000453349 CYP4F22Q6NT55 531 aa17.42■□□□□ 0.38
NCKIPSD-207ENST00000453349 KIAA1211Q6ZU35 1233 aa17.42■□□□□ 0.38
NCKIPSD-207ENST00000453349 CLMNQ96JQ2 1002 aa17.42■□□□□ 0.38
NCKIPSD-207ENST00000453349 DSCC1Q9BVC3 393 aa17.42■□□□□ 0.38
NCKIPSD-207ENST00000453349 ELP3Q9H9T3 547 aa17.42■□□□□ 0.38
NCKIPSD-207ENST00000453349 SGSM2O43147 1006 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 FGAP02671 866 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 CAP2P40123 477 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 GABPAQ06546 454 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 CERKLQ49MI3 558 aaPredicted RBP17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 TATDN1Q6P1N9 297 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 SCYL3Q8IZE3 742 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 DYNLL2Q96FJ2 89 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 CAPNS2Q96L46 248 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 ZNF287Q9HBT7 754 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 PICK1Q9NRD5 415 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 CTNNA3Q9UI47 895 aa17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 WDR33Q9C0J8 1336 aaKnown RBP17.41■□□□□ 0.38
NCKIPSD-207ENST00000453349 FOXP2O15409 715 aa17.4■□□□□ 0.38
NCKIPSD-207ENST00000453349 CDK8P49336 464 aa17.4■□□□□ 0.38
NCKIPSD-207ENST00000453349 VEGFBP49765 207 aa17.4■□□□□ 0.38
NCKIPSD-207ENST00000453349 PPARAQ07869 468 aa17.4■□□□□ 0.38
NCKIPSD-207ENST00000453349 NOL9Q5SY16 702 aaKnown RBP17.4■□□□□ 0.38
NCKIPSD-207ENST00000453349 C16orf86Q6ZW13 317 aa17.4■□□□□ 0.38
NCKIPSD-207ENST00000453349 ESYT1Q9BSJ8 1104 aa17.4■□□□□ 0.38
NCKIPSD-207ENST00000453349 DNAJC18Q9H819 358 aa17.4■□□□□ 0.38
NCKIPSD-207ENST00000453349 MKNK2Q9HBH9 465 aa17.4■□□□□ 0.38
NCKIPSD-207ENST00000453349 CABP5Q9NP86 173 aa17.4■□□□□ 0.38
NCKIPSD-207ENST00000453349 DDX60LQ5H9U9 1706 aaKnown RBP17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 SLC10A3P09131 477 aa17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 EVX2Q03828 476 aa17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 PDE4BQ07343 736 aa17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 ERO1BQ86YB8 467 aa17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 RASAL3Q86YV0 1011 aa17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 STK11IPQ8N1F8 1099 aa17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 OPTNQ96CV9 577 aa17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 IL25Q9H293 177 aa17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 GINM1Q9NU53 330 aa17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 SNCAIPQ9Y6H5 919 aa17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 BAZ2AQ9UIF9 1905 aaKnown RBP17.39■□□□□ 0.37
NCKIPSD-207ENST00000453349 ZNF213O14771 459 aa17.38■□□□□ 0.37
NCKIPSD-207ENST00000453349 SHMT1P34896 483 aa17.38■□□□□ 0.37
NCKIPSD-207ENST00000453349 PPATQ06203 517 aa17.38■□□□□ 0.37
NCKIPSD-207ENST00000453349 NOGQ13253 232 aa17.38■□□□□ 0.37
NCKIPSD-207ENST00000453349 SPRYD7Q5W111 196 aa17.38■□□□□ 0.37
NCKIPSD-207ENST00000453349 ZNF444Q8N0Y2 327 aaPredicted RBP17.38■□□□□ 0.37
NCKIPSD-207ENST00000453349 DNAJC5GQ8N7S2 189 aa17.38■□□□□ 0.37
NCKIPSD-207ENST00000453349 WNK4Q96J92 1243 aa17.38■□□□□ 0.37
NCKIPSD-207ENST00000453349 CCDC17Q96LX7 622 aa17.38■□□□□ 0.37
NCKIPSD-207ENST00000453349 ZMYM6O95789 1325 aa17.38■□□□□ 0.37
NCKIPSD-207ENST00000453349 SPDYE5A6NIY4 337 aa17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 FAM155AB1AL88 458 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 GDF11O95390 407 aa17.37■□□□□ 0.37
NCKIPSD-207ENST00000453349 ASNSP08243 561 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms