RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 HRASLS5Q96KN8 279 aa5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 DUSP23Q9BVJ7 150 aa5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 OSBPL7Q9BZF2 842 aa5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 CACNA2D2Q9NY47 1150 aa5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 VAV3Q9UKW4 847 aa5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 FBXO24O75426 580 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 CEACAM5P06731 702 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 PRKCQQ04759 706 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 PLCL1Q15111 1095 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 TOP6BLQ8N6T0 577 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 STK35Q8TDR2 534 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 ADGRE2Q9UHX3 823 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 RNF114Q9Y508 228 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 SNX11Q9Y5W9 270 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 SNCAIPQ9Y6H5 919 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 UNC13AQ9UPW8 1703 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 BICRAQ9NZM4 1560 aa5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 TOP2AP11388 1531 aaKnown RBP5.33□□□□□ -1.56
HMGB3P11-201ENST00000440127 ANKRD33BA6NCL7 494 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 IGF2BP3O00425 579 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 NEFMP07197 916 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 BMP6P22004 513 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 XPCQ01831 940 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 ZBTB37Q5TC79 503 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 ANGEL2Q5VTE6 544 aaKnown RBP5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 TTBK2Q6IQ55 1244 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 RGS22Q8NE09 1264 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 BCL7CQ8WUZ0 217 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 ASB11Q8WXH4 323 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 COX4I2Q96KJ9 171 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 FMNL2Q96PY5 1086 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 PRDM10Q9NQV6 1147 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 WWC3Q9ULE0 1092 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 TACC3Q9Y6A5 838 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 AK5Q9Y6K8 562 aa5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 ARID1BQ8NFD5 2236 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P11-201ENST00000440127 DCDC2CA8MYV0 355 aa5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 ADAMTS4O75173 837 aa5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 LRIG2O94898 1065 aa5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 CELA3AP09093 270 aa5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 PSMD2Q13200 908 aa5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 PPM1JQ5JR12 505 aa5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 FAM9AQ8IZU1 332 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 FOXQ1Q9C009 403 aa5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 PAK6Q9NQU5 681 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 PRDM5Q9NQX1 630 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 MAPK8IP1Q9UQF2 711 aa5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 CCDC88BA6NC98 1476 aa5.31□□□□□ -1.56
HMGB3P11-201ENST00000440127 PRAMEF27A3QJZ7 478 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 PAGE1O75459 146 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 CYP7A1P22680 504 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 CLCN7P51798 805 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 ETF1P62495 437 aaKnown RBP5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 PDE4BQ07343 736 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 TMCO4Q5TGY1 634 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 SHISA5Q8N114 240 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 MFSD2AQ8NA29 543 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 SETDB2Q96T68 719 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 DUSP9Q99956 384 aaKnown RBP5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 MIR1-1HGQ9H1L0 117 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 MRS2Q9HD23 443 aa5.3□□□□□ -1.56
HMGB3P11-201ENST00000440127 ITIH2P19823 946 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 FUT4P22083 530 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 CAP2P40123 477 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 ST13P50502 369 aaKnown RBP5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 RING1Q06587 406 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 WIPI1Q5MNZ9 446 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 CBLL1Q75N03 491 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 ARMCX6Q7L4S7 300 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 C12orf40Q86WS4 652 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 HID1Q8IV36 788 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 PLD6Q8N2A8 252 aaKnown RBP5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 FAM181AQ8N9Y4 354 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 GRIN3AQ8TCU5 1115 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 CCDC120Q96HB5 630 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 NOC4LQ9BVI4 516 aaKnown RBP5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 PCGF6Q9BYE7 350 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 GZF1Q9H116 711 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 CSADQ9Y600 493 aa5.29□□□□□ -1.56
HMGB3P11-201ENST00000440127 LEFTY1O75610 366 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 ITGB5P18084 799 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 MFAP1P55081 439 aaKnown RBP5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 OXCT1P55809 520 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 PWP1Q13610 501 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 AOC3Q16853 763 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 CYFIP1Q7L576 1253 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 PI4K2BQ8TCG2 481 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 PLPPR2Q96GM1 343 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 CRELD1Q96HD1 420 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 WNT10AQ9GZT5 417 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 TPX2Q9ULW0 747 aaKnown RBP5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 SMARCA2P51531 1590 aa5.28□□□□□ -1.56
HMGB3P11-201ENST00000440127 FAM155AB1AL88 458 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 BPNT1O95861 308 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 LIG3P49916 1009 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 IKZF1Q13422 519 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 FZD5Q13467 585 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 TAF1CQ15572 869 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 TSNAXIP1Q2TAA8 658 aa5.27□□□□□ -1.57
HMGB3P11-201ENST00000440127 ZNF792Q3KQV3 632 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms