RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 DDX60LQ5H9U9 1706 aaKnown RBP18.62■□□□□ 0.57
TREX1-201ENST00000433541 SIPA1L1O43166 1804 aa18.62■□□□□ 0.57
TREX1-201ENST00000433541 LAMB1P07942 1786 aa18.61■□□□□ 0.57
TREX1-201ENST00000433541 HIP1O00291 1037 aa18.61■□□□□ 0.57
TREX1-201ENST00000433541 GNAT2P19087 354 aa18.61■□□□□ 0.57
TREX1-201ENST00000433541 INPP5BP32019 993 aa18.61■□□□□ 0.57
TREX1-201ENST00000433541 TDO2P48775 406 aa18.61■□□□□ 0.57
TREX1-201ENST00000433541 ZMYM1Q5SVZ6 1142 aa18.61■□□□□ 0.57
TREX1-201ENST00000433541 DCP1AQ9NPI6 582 aaPredicted RBP18.61■□□□□ 0.57
TREX1-201ENST00000433541 HERC5Q9UII4 1024 aaKnown RBP18.61■□□□□ 0.57
TREX1-201ENST00000433541 UNCXA6NJT0 531 aa18.6■□□□□ 0.57
TREX1-201ENST00000433541 SLURP2P0DP57 97 aa18.6■□□□□ 0.57
TREX1-201ENST00000433541 SKAP1Q86WV1 359 aa18.6■□□□□ 0.57
TREX1-201ENST00000433541 OTUD5Q96G74 571 aa18.6■□□□□ 0.57
TREX1-201ENST00000433541 STRBPQ96SI9 672 aaKnown RBP18.6■□□□□ 0.57
TREX1-201ENST00000433541 BEGAINQ9BUH8 593 aa18.6■□□□□ 0.57
TREX1-201ENST00000433541 PICK1Q9NRD5 415 aa18.6■□□□□ 0.57
TREX1-201ENST00000433541 GSPT1P15170 499 aaKnown RBP18.59■□□□□ 0.57
TREX1-201ENST00000433541 SDSP20132 328 aa18.59■□□□□ 0.57
TREX1-201ENST00000433541 NMIQ13287 307 aaPredicted RBP18.59■□□□□ 0.57
TREX1-201ENST00000433541 CCDC129Q6ZRS4 1044 aa18.59■□□□□ 0.57
TREX1-201ENST00000433541 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.59■□□□□ 0.57
TREX1-201ENST00000433541 FOXP4Q8IVH2 680 aaPredicted RBP18.59■□□□□ 0.57
TREX1-201ENST00000433541 OPTNQ96CV9 577 aa18.59■□□□□ 0.57
TREX1-201ENST00000433541 FAM227BQ96M60 508 aa18.59■□□□□ 0.57
TREX1-201ENST00000433541 NACAP1Q9BZK3 213 aa18.59■□□□□ 0.57
TREX1-201ENST00000433541 HELLSQ9NRZ9 838 aa18.59■□□□□ 0.57
TREX1-201ENST00000433541 SERPINB13Q9UIV8 391 aa18.59■□□□□ 0.57
TREX1-201ENST00000433541 A0A0D9SFI3 127 aa18.58■□□□□ 0.56
TREX1-201ENST00000433541 FAM155AB1AL88 458 aaPredicted RBP18.58■□□□□ 0.56
TREX1-201ENST00000433541 MAP2K2P36507 400 aa18.58■□□□□ 0.56
TREX1-201ENST00000433541 MCMDC2Q4G0Z9 681 aa18.58■□□□□ 0.56
TREX1-201ENST00000433541 CWC27Q6UX04 472 aaKnown RBP18.58■□□□□ 0.56
TREX1-201ENST00000433541 WNK4Q96J92 1243 aa18.58■□□□□ 0.56
TREX1-201ENST00000433541 TBC1D12O60347 775 aa18.57■□□□□ 0.56
TREX1-201ENST00000433541 MFAP1P55081 439 aaKnown RBP18.57■□□□□ 0.56
TREX1-201ENST00000433541 KIF23Q02241 960 aaPredicted RBP18.57■□□□□ 0.56
TREX1-201ENST00000433541 SPRYD7Q5W111 196 aa18.57■□□□□ 0.56
TREX1-201ENST00000433541 TICAM2Q86XR7 235 aa18.57■□□□□ 0.56
TREX1-201ENST00000433541 SCYL3Q8IZE3 742 aa18.57■□□□□ 0.56
TREX1-201ENST00000433541 ARPP21Q9UBL0 812 aaPredicted RBP18.57■□□□□ 0.56
TREX1-201ENST00000433541 SNCAIPQ9Y6H5 919 aa18.57■□□□□ 0.56
TREX1-201ENST00000433541 THSD7BQ9C0I4 1608 aa18.56■□□□□ 0.56
TREX1-201ENST00000433541 MINDY4BA8MYZ0 360 aa18.56■□□□□ 0.56
TREX1-201ENST00000433541 USP17L12C9JPN9 530 aa18.56■□□□□ 0.56
TREX1-201ENST00000433541 USP17L21D6R901 530 aa18.56■□□□□ 0.56
TREX1-201ENST00000433541 ZBTB48P10074 688 aaPredicted RBP18.56■□□□□ 0.56
TREX1-201ENST00000433541 CYP2D6P10635 497 aa18.56■□□□□ 0.56
TREX1-201ENST00000433541 PLCD1P51178 756 aa18.56■□□□□ 0.56
TREX1-201ENST00000433541 MAP2K1Q02750 393 aaPredicted RBP18.56■□□□□ 0.56
TREX1-201ENST00000433541 ERO1BQ86YB8 467 aa18.56■□□□□ 0.56
TREX1-201ENST00000433541 CNKSR2Q8WXI2 1034 aa18.56■□□□□ 0.56
TREX1-201ENST00000433541 NAPBQ9H115 298 aa18.56■□□□□ 0.56
TREX1-201ENST00000433541 ZNF112Q9UJU3 913 aa18.56■□□□□ 0.56
TREX1-201ENST00000433541 CYP2D7A0A087X1C5 515 aa18.55■□□□□ 0.56
TREX1-201ENST00000433541 GSG1L2A8MUP6 293 aa18.55■□□□□ 0.56
TREX1-201ENST00000433541 PATL2C9JE40 543 aaKnown RBP18.55■□□□□ 0.56
TREX1-201ENST00000433541 CTNND1O60716 968 aaKnown RBP18.55■□□□□ 0.56
TREX1-201ENST00000433541 GDF11O95390 407 aa18.55■□□□□ 0.56
TREX1-201ENST00000433541 SREBF2Q12772 1141 aa18.55■□□□□ 0.56
TREX1-201ENST00000433541 STK11IPQ8N1F8 1099 aa18.55■□□□□ 0.56
TREX1-201ENST00000433541 EHD4Q9H223 541 aa18.55■□□□□ 0.56
TREX1-201ENST00000433541 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
TREX1-201ENST00000433541 SPDYE5A6NIY4 337 aa18.54■□□□□ 0.56
TREX1-201ENST00000433541 PHF20L1A8MW92 1017 aa18.54■□□□□ 0.56
TREX1-201ENST00000433541 NOL9Q5SY16 702 aaKnown RBP18.54■□□□□ 0.56
TREX1-201ENST00000433541 GIMAP6Q6P9H5 292 aa18.54■□□□□ 0.56
TREX1-201ENST00000433541 CTR9Q6PD62 1173 aa18.54■□□□□ 0.56
TREX1-201ENST00000433541 JMYQ8N9B5 988 aa18.54■□□□□ 0.56
TREX1-201ENST00000433541 RUFY2Q8WXA3 655 aa18.54■□□□□ 0.56
TREX1-201ENST00000433541 ZIC5Q96T25 663 aa18.54■□□□□ 0.56
TREX1-201ENST00000433541 MANSC4A6NHS7 340 aaPredicted RBP18.53■□□□□ 0.56
TREX1-201ENST00000433541 MPHOSPH10O00566 681 aaKnown RBP18.53■□□□□ 0.56
TREX1-201ENST00000433541 CAP2P40123 477 aa18.53■□□□□ 0.56
TREX1-201ENST00000433541 MAP3K10Q02779 954 aa18.53■□□□□ 0.56
TREX1-201ENST00000433541 CERKLQ49MI3 558 aaPredicted RBP18.53■□□□□ 0.56
TREX1-201ENST00000433541 IFNL3Q8IZI9 196 aa18.53■□□□□ 0.56
TREX1-201ENST00000433541 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
TREX1-201ENST00000433541 DNAJC18Q9H819 358 aa18.53■□□□□ 0.56
TREX1-201ENST00000433541 GTF2A2P52657 109 aa18.52■□□□□ 0.56
TREX1-201ENST00000433541 PPATQ06203 517 aa18.52■□□□□ 0.56
TREX1-201ENST00000433541 PPIL2Q13356 520 aa18.52■□□□□ 0.56
TREX1-201ENST00000433541 C12orf60Q5U649 245 aa18.52■□□□□ 0.56
TREX1-201ENST00000433541 ZNF589Q86UQ0 364 aaPredicted RBP18.52■□□□□ 0.56
TREX1-201ENST00000433541 REM2Q8IYK8 340 aaPredicted RBP18.52■□□□□ 0.56
TREX1-201ENST00000433541 EPB41L4AQ9HCS5 686 aaPredicted RBP18.52■□□□□ 0.56
TREX1-201ENST00000433541 CABP5Q9NP86 173 aa18.52■□□□□ 0.56
TREX1-201ENST00000433541 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.52■□□□□ 0.56
TREX1-201ENST00000433541 SWAP70Q9UH65 585 aa18.52■□□□□ 0.56
TREX1-201ENST00000433541 ZHX2Q9Y6X8 837 aa18.52■□□□□ 0.56
TREX1-201ENST00000433541 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
TREX1-201ENST00000433541 IRF6O14896 467 aa18.51■□□□□ 0.55
TREX1-201ENST00000433541 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
TREX1-201ENST00000433541 ASNSP08243 561 aa18.51■□□□□ 0.55
TREX1-201ENST00000433541 HSPA1AP0DMV8 641 aaKnown RBP18.51■□□□□ 0.55
TREX1-201ENST00000433541 HSPA1BP0DMV9 641 aaKnown RBP18.51■□□□□ 0.55
TREX1-201ENST00000433541 PTPRAP18433 802 aa18.51■□□□□ 0.55
TREX1-201ENST00000433541 GJA5P36382 358 aa18.51■□□□□ 0.55
TREX1-201ENST00000433541 EVX2Q03828 476 aa18.51■□□□□ 0.55
TREX1-201ENST00000433541 SNAPC2Q13487 334 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms