RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 IL15P40933 162 aaPredicted RBP10.32□□□□□ -0.76
CDH13-203ENST00000431540 PSMC4P43686 418 aa10.32□□□□□ -0.76
CDH13-203ENST00000431540 RFX5P48382 616 aaPredicted RBP10.32□□□□□ -0.76
CDH13-203ENST00000431540 FXR1P51114 621 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDH13-203ENST00000431540 IRF5Q13568 498 aa10.32□□□□□ -0.76
CDH13-203ENST00000431540 SPTY2D1Q68D10 685 aaPredicted RBP10.32□□□□□ -0.76
CDH13-203ENST00000431540 PARK7Q99497 189 aaKnown RBP10.32□□□□□ -0.76
CDH13-203ENST00000431540 PHIPQ8WWQ0 1821 aa10.32□□□□□ -0.76
CDH13-203ENST00000431540 BRCA2P51587 3418 aa10.32□□□□□ -0.76
CDH13-203ENST00000431540 TRIOBPQ9H2D6 2365 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 PDHXO00330 501 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 CTNND1O60716 968 aaKnown RBP10.31□□□□□ -0.76
CDH13-203ENST00000431540 BCRP11274 1271 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 FCGRTP55899 365 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 CAP1Q01518 475 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 CHAF1AQ13111 956 aaPredicted RBP10.31□□□□□ -0.76
CDH13-203ENST00000431540 CDC42EP5Q6NZY7 148 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 ATG9AQ7Z3C6 839 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 UBE2Q1Q7Z7E8 422 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 PTCD2Q8WV60 388 aaKnown RBP10.31□□□□□ -0.76
CDH13-203ENST00000431540 ARHGAP45Q92619 1136 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 KCNK17Q96T54 332 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 COPRSQ9NQ92 184 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 AKAP2Q9Y2D5 859 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 NR2E3Q9Y5X4 410 aa10.31□□□□□ -0.76
CDH13-203ENST00000431540 A0A0G2JLL6 359 aaPredicted RBP10.3□□□□□ -0.76
CDH13-203ENST00000431540 PHF20L1A8MW92 1017 aa10.3□□□□□ -0.76
CDH13-203ENST00000431540 MOGSQ13724 837 aa10.3□□□□□ -0.76
CDH13-203ENST00000431540 GRIK5Q16478 980 aa10.3□□□□□ -0.76
CDH13-203ENST00000431540 PRRT2Q7Z6L0 340 aaPredicted RBP10.3□□□□□ -0.76
CDH13-203ENST00000431540 TRMT2AQ8IZ69 625 aaKnown RBP10.3□□□□□ -0.76
CDH13-203ENST00000431540 SCYL3Q8IZE3 742 aa10.3□□□□□ -0.76
CDH13-203ENST00000431540 RAET1EQ8TD07 263 aa10.3□□□□□ -0.76
CDH13-203ENST00000431540 USP40Q9NVE5 1235 aa10.3□□□□□ -0.76
CDH13-203ENST00000431540 DAGLAQ9Y4D2 1042 aa10.3□□□□□ -0.76
CDH13-203ENST00000431540 GAKO14976 1311 aa10.3□□□□□ -0.76
CDH13-203ENST00000431540 DOCK1Q14185 1865 aa10.3□□□□□ -0.76
CDH13-203ENST00000431540 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
CDH13-203ENST00000431540 LDHCP07864 332 aa10.29□□□□□ -0.76
CDH13-203ENST00000431540 OSBPP22059 807 aa10.29□□□□□ -0.76
CDH13-203ENST00000431540 INPP5BP32019 993 aa10.29□□□□□ -0.76
CDH13-203ENST00000431540 SLFN5Q08AF3 891 aa10.29□□□□□ -0.76
CDH13-203ENST00000431540 ATP2B3Q16720 1220 aa10.29□□□□□ -0.76
CDH13-203ENST00000431540 MIGA2Q7L4E1 593 aa10.29□□□□□ -0.76
CDH13-203ENST00000431540 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.29□□□□□ -0.76
CDH13-203ENST00000431540 SSH1Q8WYL5 1049 aa10.29□□□□□ -0.76
CDH13-203ENST00000431540 API5Q9BZZ5 524 aaKnown RBP10.29□□□□□ -0.76
CDH13-203ENST00000431540 GINM1Q9NU53 330 aa10.29□□□□□ -0.76
CDH13-203ENST00000431540 FAM198AQ9UFP1 575 aa10.29□□□□□ -0.76
CDH13-203ENST00000431540 IQSEC3Q9UPP2 1182 aaPredicted RBP10.29□□□□□ -0.76
CDH13-203ENST00000431540 SALL2Q9Y467 1007 aaPredicted RBP10.29□□□□□ -0.76
CDH13-203ENST00000431540 AFG3L2Q9Y4W6 797 aa10.29□□□□□ -0.76
CDH13-203ENST00000431540 COL2A1P02458 1487 aaPredicted RBP10.29□□□□□ -0.76
CDH13-203ENST00000431540 SGPL1O95470 568 aa10.28□□□□□ -0.76
CDH13-203ENST00000431540 UBTFL1P0CB47 393 aaPredicted RBP10.28□□□□□ -0.76
CDH13-203ENST00000431540 PTPRAP18433 802 aa10.28□□□□□ -0.76
CDH13-203ENST00000431540 GCLCP48506 637 aaPredicted RBP10.28□□□□□ -0.76
CDH13-203ENST00000431540 CACNB3P54284 484 aa10.28□□□□□ -0.76
CDH13-203ENST00000431540 PABPC4Q13310 644 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDH13-203ENST00000431540 GPAT2Q6NUI2 795 aa10.28□□□□□ -0.76
CDH13-203ENST00000431540 TMED8Q6PL24 325 aaPredicted RBP10.28□□□□□ -0.76
CDH13-203ENST00000431540 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
CDH13-203ENST00000431540 PROCA1Q8NCQ7 364 aaPredicted RBP10.28□□□□□ -0.76
CDH13-203ENST00000431540 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
CDH13-203ENST00000431540 OSBPL5Q9H0X9 879 aaPredicted RBP10.28□□□□□ -0.76
CDH13-203ENST00000431540 PICK1Q9NRD5 415 aa10.28□□□□□ -0.76
CDH13-203ENST00000431540 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.28□□□□□ -0.76
CDH13-203ENST00000431540 PNMA3Q9UL41 463 aa10.28□□□□□ -0.76
CDH13-203ENST00000431540 LRRFIP2Q9Y608 721 aaKnown RBP10.28□□□□□ -0.76
CDH13-203ENST00000431540 MYPNQ86TC9 1320 aa10.28□□□□□ -0.76
CDH13-203ENST00000431540 ATRNL1Q5VV63 1379 aa10.27□□□□□ -0.76
CDH13-203ENST00000431540 GPR75-ASB3A0A0A6YYF3 556 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 BHMG1C9JSJ3 638 aaPredicted RBP10.27□□□□□ -0.77
CDH13-203ENST00000431540 GSTO1P78417 241 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 MTX1Q13505 466 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 FAM9BQ8IZU0 186 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 SH3TC2Q8TF17 1288 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 ARHGAP39Q9C0H5 1083 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 RNF208Q9H0X6 261 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 PRO3102Q9H379 93 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 CPA4Q9UI42 421 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 ZHX2Q9Y6X8 837 aa10.27□□□□□ -0.77
CDH13-203ENST00000431540 ZSWIM8A7E2V4 1837 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 ATAD5Q96QE3 1844 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 H0YGN5 161 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 LCE2BO14633 110 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 GNAI3P08754 354 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 CCL5P13501 91 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 PRDX5P30044 214 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 MVPQ14764 893 aaKnown RBP10.26□□□□□ -0.77
CDH13-203ENST00000431540 FAM110CQ1W6H9 321 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 DPF3Q92784 378 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 COA7Q96BR5 231 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
CDH13-203ENST00000431540 HERC5Q9UII4 1024 aaKnown RBP10.26□□□□□ -0.77
CDH13-203ENST00000431540 ADCY3O60266 1144 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 CTGFP29279 349 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 BMP8BP34820 402 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 RGS3P49796 1198 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms