RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 A0A0G2JLL6 359 aaPredicted RBP12.39□□□□□ -0.43
COMMD1-202ENST00000427417 APBB1O00213 710 aa12.39□□□□□ -0.43
COMMD1-202ENST00000427417 GNRH1P01148 92 aa12.39□□□□□ -0.43
COMMD1-202ENST00000427417 CYP7A1P22680 504 aa12.39□□□□□ -0.43
COMMD1-202ENST00000427417 PRRT2Q7Z6L0 340 aaPredicted RBP12.39□□□□□ -0.43
COMMD1-202ENST00000427417 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
COMMD1-202ENST00000427417 TRIM34Q9BYJ4 488 aa12.39□□□□□ -0.43
COMMD1-202ENST00000427417 AFG3L2Q9Y4W6 797 aa12.39□□□□□ -0.43
COMMD1-202ENST00000427417 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
COMMD1-202ENST00000427417 POTEFA5A3E0 1075 aa12.38□□□□□ -0.43
COMMD1-202ENST00000427417 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
COMMD1-202ENST00000427417 LACTBP83111 547 aaPredicted RBP12.38□□□□□ -0.43
COMMD1-202ENST00000427417 MOGSQ13724 837 aa12.38□□□□□ -0.43
COMMD1-202ENST00000427417 ADGRA1Q86SQ6 560 aa12.38□□□□□ -0.43
COMMD1-202ENST00000427417 SIRT2Q8IXJ6 389 aa12.38□□□□□ -0.43
COMMD1-202ENST00000427417 MAGEB6Q8N7X4 407 aa12.38□□□□□ -0.43
COMMD1-202ENST00000427417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.38□□□□□ -0.43
COMMD1-202ENST00000427417 CPA4Q9UI42 421 aa12.38□□□□□ -0.43
COMMD1-202ENST00000427417 SLC45A1Q9Y2W3 748 aa12.38□□□□□ -0.43
COMMD1-202ENST00000427417 PTCH2Q9Y6C5 1203 aa12.38□□□□□ -0.43
COMMD1-202ENST00000427417 FLT1P17948 1338 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 CENPFP49454 3210 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 KIAA0100Q14667 2235 aaKnown RBP12.37□□□□□ -0.43
COMMD1-202ENST00000427417 TRIM75PA6NK02 468 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 CAP2P40123 477 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 PRMT2P55345 433 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 C17orf99Q6UX52 265 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 GADL1Q6ZQY3 521 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 FOXP4Q8IVH2 680 aaPredicted RBP12.37□□□□□ -0.43
COMMD1-202ENST00000427417 MAPKAPK5Q8IW41 473 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 CRACR2BQ8N4Y2 399 aaPredicted RBP12.37□□□□□ -0.43
COMMD1-202ENST00000427417 ANTXR1Q9H6X2 564 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 AS3MTQ9HBK9 375 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 NDUFB9Q9Y6M9 179 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 PTPRFP10586 1907 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 PHIPQ8WWQ0 1821 aa12.37□□□□□ -0.43
COMMD1-202ENST00000427417 TNRC18O15417 2968 aaPredicted RBP12.36□□□□□ -0.43
COMMD1-202ENST00000427417 MYCP01106 439 aaPredicted RBP12.36□□□□□ -0.43
COMMD1-202ENST00000427417 CTGFP29279 349 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 USP5P45974 858 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 GPAT2Q6NUI2 795 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 MIGA1Q8NAN2 632 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 ZNF280CQ8ND82 737 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 GINM1Q9NU53 330 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 PNMA3Q9UL41 463 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 SIPA1L1O43166 1804 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 CDK5RAP2Q96SN8 1893 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 ADGRA2Q96PE1 1338 aa12.36□□□□□ -0.43
COMMD1-202ENST00000427417 BRCA2P51587 3418 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 ASNSP08243 561 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 CYP2C8P10632 490 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 HOXD10P28358 340 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 DYNLL1P63167 89 aaKnown RBP12.35□□□□□ -0.43
COMMD1-202ENST00000427417 PABPC4Q13310 644 aaKnown RBP eCLIP12.35□□□□□ -0.43
COMMD1-202ENST00000427417 RRP1BQ14684 758 aaKnown RBP12.35□□□□□ -0.43
COMMD1-202ENST00000427417 SLC9C1Q4G0N8 1177 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
COMMD1-202ENST00000427417 PROCA1Q8NCQ7 364 aaPredicted RBP12.35□□□□□ -0.43
COMMD1-202ENST00000427417 ARMC5Q96C12 935 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 DNAJC2Q99543 621 aaKnown RBP12.35□□□□□ -0.43
COMMD1-202ENST00000427417 LRRCC1Q9C099 1032 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 BCL11AQ9H165 835 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 PALD1Q9ULE6 856 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 AGTPBP1Q9UPW5 1226 aa12.35□□□□□ -0.43
COMMD1-202ENST00000427417 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
COMMD1-202ENST00000427417 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
COMMD1-202ENST00000427417 GOLIM4O00461 696 aa12.34□□□□□ -0.43
COMMD1-202ENST00000427417 PSMC4P43686 418 aa12.34□□□□□ -0.43
COMMD1-202ENST00000427417 SPP2Q13103 211 aa12.34□□□□□ -0.43
COMMD1-202ENST00000427417 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
COMMD1-202ENST00000427417 SLC9C2Q5TAH2 1124 aa12.34□□□□□ -0.43
COMMD1-202ENST00000427417 TTC6Q86TZ1 520 aa12.34□□□□□ -0.43
COMMD1-202ENST00000427417 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
COMMD1-202ENST00000427417 SH3TC2Q8TF17 1288 aa12.34□□□□□ -0.43
COMMD1-202ENST00000427417 SAP30BPQ9UHR5 308 aaKnown RBP12.34□□□□□ -0.43
COMMD1-202ENST00000427417 FOCADQ5VW36 1801 aa12.33□□□□□ -0.44
COMMD1-202ENST00000427417 FMNL1O95466 1100 aaPredicted RBP12.33□□□□□ -0.44
COMMD1-202ENST00000427417 BCRP11274 1271 aa12.33□□□□□ -0.44
COMMD1-202ENST00000427417 ATP5JP18859 108 aa12.33□□□□□ -0.44
COMMD1-202ENST00000427417 EN2P19622 333 aaPredicted RBP12.33□□□□□ -0.44
COMMD1-202ENST00000427417 FCGRTP55899 365 aa12.33□□□□□ -0.44
COMMD1-202ENST00000427417 TRIM47Q96LD4 638 aa12.33□□□□□ -0.44
COMMD1-202ENST00000427417 WDR18Q9BV38 432 aa12.33□□□□□ -0.44
COMMD1-202ENST00000427417 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.44
COMMD1-202ENST00000427417 EHD4Q9H223 541 aa12.33□□□□□ -0.44
COMMD1-202ENST00000427417 PAG1Q9NWQ8 432 aa12.33□□□□□ -0.44
COMMD1-202ENST00000427417 RBBP6Q7Z6E9 1792 aaKnown RBP12.33□□□□□ -0.44
COMMD1-202ENST00000427417 PDE6AP16499 860 aa12.32□□□□□ -0.44
COMMD1-202ENST00000427417 OSBPP22059 807 aa12.32□□□□□ -0.44
COMMD1-202ENST00000427417 SHROOM1Q2M3G4 852 aaPredicted RBP12.32□□□□□ -0.44
COMMD1-202ENST00000427417 SH3D19Q5HYK7 790 aa12.32□□□□□ -0.44
COMMD1-202ENST00000427417 ZNF333Q96JL9 665 aa12.32□□□□□ -0.44
COMMD1-202ENST00000427417 RIOK1Q9BRS2 568 aaKnown RBP12.32□□□□□ -0.44
COMMD1-202ENST00000427417 TMEM106CQ9BVX2 250 aa12.32□□□□□ -0.44
COMMD1-202ENST00000427417 CRNKL1Q9BZJ0 848 aaKnown RBP12.32□□□□□ -0.44
COMMD1-202ENST00000427417 BOLA2Q9H3K6 86 aa12.32□□□□□ -0.44
COMMD1-202ENST00000427417 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms