RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 POLR2DO15514 142 aaKnown RBP15.39■□□□□ 0.05
USP42-203ENST00000426246 PPARDQ03181 441 aa15.39■□□□□ 0.05
USP42-203ENST00000426246 KCNB2Q92953 911 aa15.39■□□□□ 0.05
USP42-203ENST00000426246 ELP1O95163 1332 aa15.39■□□□□ 0.05
USP42-203ENST00000426246 CYP2D7A0A087X1C5 515 aa15.39■□□□□ 0.05
USP42-203ENST00000426246 IQCB1Q15051 598 aa15.39■□□□□ 0.05
USP42-203ENST00000426246 LRRFIP1Q32MZ4 808 aaKnown RBP15.39■□□□□ 0.05
USP42-203ENST00000426246 SPTLC3Q9NUV7 552 aa15.39■□□□□ 0.05
USP42-203ENST00000426246 NARFQ9UHQ1 456 aa15.39■□□□□ 0.05
USP42-203ENST00000426246 MYO5AQ9Y4I1 1855 aaKnown RBP15.39■□□□□ 0.05
USP42-203ENST00000426246 ANKRD18BA2A2Z9 1011 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 WDHD1O75717 1129 aaPredicted RBP15.38■□□□□ 0.05
USP42-203ENST00000426246 TBC1D9BQ66K14 1250 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 PLA2G4DQ86XP0 818 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 DHX40Q8IX18 779 aaKnown RBP15.38■□□□□ 0.05
USP42-203ENST00000426246 FBXO18Q8NFZ0 1043 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.38■□□□□ 0.05
USP42-203ENST00000426246 CABP5Q9NP86 173 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 HELLSQ9NRZ9 838 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 CTAGE5O15320 804 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 C3orf67Q6ZVT6 689 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 LINC00301Q8NCQ3 95 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 SEC31BQ9NQW1 1179 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 MYH7P12883 1935 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 CDC25AP30304 524 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 MCAMP43121 646 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 CYB5R4Q7L1T6 521 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 CARD6Q9BX69 1037 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
USP42-203ENST00000426246 AKAP2Q9Y2D5 859 aa15.38■□□□□ 0.05
USP42-203ENST00000426246 TNRC6CQ9HCJ0 1690 aaKnown RBP15.38■□□□□ 0.05
USP42-203ENST00000426246 SEC31AO94979 1220 aaKnown RBP15.37■□□□□ 0.05
USP42-203ENST00000426246 CDC27P30260 824 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 TBC1D10CQ8IV04 446 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 ZBTB22O15209 634 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 GRIN1Q05586 938 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 USPL1Q5W0Q7 1092 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 UBAC1Q9BSL1 405 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 PUF60Q9UHX1 559 aaKnown RBP15.37■□□□□ 0.05
USP42-203ENST00000426246 ZNF652Q9Y2D9 606 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 SLC4A4Q9Y6R1 1079 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 GNPATO15228 680 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 GTF2F1P35269 517 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP42-203ENST00000426246 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
USP42-203ENST00000426246 KCNG4Q8TDN1 519 aa15.37■□□□□ 0.05
USP42-203ENST00000426246 WTIPA6NIX2 430 aaPredicted RBP15.36■□□□□ 0.05
USP42-203ENST00000426246 FGFR2P21802 821 aa15.36■□□□□ 0.05
USP42-203ENST00000426246 GUCY1A2P33402 732 aa15.36■□□□□ 0.05
USP42-203ENST00000426246 BCAMP50895 628 aa15.36■□□□□ 0.05
USP42-203ENST00000426246 PIH1D3Q9NQM4 214 aaKnown RBP15.36■□□□□ 0.05
USP42-203ENST00000426246 ADALQ6DHV7 355 aa15.36■□□□□ 0.05
USP42-203ENST00000426246 NAA16Q6N069 864 aaPredicted RBP15.36■□□□□ 0.05
USP42-203ENST00000426246 FBXO38Q6PIJ6 1188 aa15.36■□□□□ 0.05
USP42-203ENST00000426246 ARHGEF1Q92888 912 aaKnown RBP15.36■□□□□ 0.05
USP42-203ENST00000426246 PCDHA5Q9Y5H7 936 aa15.36■□□□□ 0.05
USP42-203ENST00000426246 CCT6AP40227 531 aaKnown RBP15.36■□□□□ 0.05
USP42-203ENST00000426246 SSRP1Q08945 709 aaKnown RBP15.36■□□□□ 0.05
USP42-203ENST00000426246 ERFEQ4G0M1 354 aa15.36■□□□□ 0.05
USP42-203ENST00000426246 FKBP15Q5T1M5 1219 aa15.36■□□□□ 0.05
USP42-203ENST00000426246 CCDC102BQ68D86 513 aa15.36■□□□□ 0.05
USP42-203ENST00000426246 APPBP2Q92624 585 aa15.36■□□□□ 0.05
USP42-203ENST00000426246 IRX2Q9BZI1 471 aaPredicted RBP15.36■□□□□ 0.05
USP42-203ENST00000426246 PDE8BO95263 885 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 SLU7O95391 586 aaKnown RBP15.35■□□□□ 0.05
USP42-203ENST00000426246 TRIM22Q8IYM9 498 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 DSCC1Q9BVC3 393 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 ANGEL1Q9UNK9 670 aaKnown RBP15.35■□□□□ 0.05
USP42-203ENST00000426246 PAXBP1Q9Y5B6 917 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 DOCK2Q92608 1830 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 GYS2P54840 703 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 MFSD6Q6ZSS7 791 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 USP49Q70CQ1 688 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 DIS3L2Q8IYB7 885 aaKnown RBP15.35■□□□□ 0.05
USP42-203ENST00000426246 VPS54Q9P1Q0 977 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 PHACTR2O75167 634 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 KRT27Q7Z3Y8 459 aa15.35■□□□□ 0.05
USP42-203ENST00000426246 PCMTD1Q96MG8 357 aaPredicted RBP15.35■□□□□ 0.05
USP42-203ENST00000426246 ZNF174Q15697 407 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 KMT5BQ4FZB7 885 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 SLC10A5Q5PT55 438 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 FMR1NBQ8N0W7 255 aaPredicted RBP15.34■□□□□ 0.05
USP42-203ENST00000426246 KCNH3Q9ULD8 1083 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 FAM205CA6NFA0 338 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 ZSCAN20P17040 1043 aaPredicted RBP15.34■□□□□ 0.05
USP42-203ENST00000426246 ARMCX5Q6P1M9 558 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 BLZF1Q9H2G9 400 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 SERTAD1Q9UHV2 236 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 ANTXR2P58335 489 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 TICAM2Q86XR7 235 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 JMYQ8N9B5 988 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 ZNF512BQ96KM6 892 aaPredicted RBP15.34■□□□□ 0.05
USP42-203ENST00000426246 NFE2L3Q9Y4A8 694 aa15.34■□□□□ 0.05
USP42-203ENST00000426246 MROH5Q6ZUA9 1318 aa15.33■□□□□ 0.04
USP42-203ENST00000426246 KIF23Q02241 960 aaPredicted RBP15.33■□□□□ 0.04
USP42-203ENST00000426246 FAM196AQ6ZSG2 479 aa15.33■□□□□ 0.04
USP42-203ENST00000426246 SMAP1Q8IYB5 467 aaPredicted RBP15.33■□□□□ 0.04
USP42-203ENST00000426246 ZCCHC17Q9NP64 241 aaKnown RBP15.33■□□□□ 0.04
USP42-203ENST00000426246 RTCBQ9Y3I0 505 aaKnown RBP15.33■□□□□ 0.04
USP42-203ENST00000426246 DNA2P51530 1060 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms