RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.25□□□□□ -1.09
LINC00396-201ENST00000411690 PAK6Q9NQU5 681 aaPredicted RBP8.25□□□□□ -1.09
LINC00396-201ENST00000411690 BSDC1Q9NW68 430 aaPredicted RBP8.25□□□□□ -1.09
LINC00396-201ENST00000411690 WDR70Q9NW82 654 aa8.25□□□□□ -1.09
LINC00396-201ENST00000411690 CHPF2Q9P2E5 772 aa8.25□□□□□ -1.09
LINC00396-201ENST00000411690 GABRQQ9UN88 632 aa8.25□□□□□ -1.09
LINC00396-201ENST00000411690 LEMD3Q9Y2U8 911 aa8.25□□□□□ -1.09
LINC00396-201ENST00000411690 ADGRA2Q96PE1 1338 aa8.25□□□□□ -1.09
LINC00396-201ENST00000411690 ALPK3Q96L96 1907 aa8.25□□□□□ -1.09
LINC00396-201ENST00000411690 PDHXO00330 501 aa8.24□□□□□ -1.09
LINC00396-201ENST00000411690 ELNP15502 786 aa8.24□□□□□ -1.09
LINC00396-201ENST00000411690 FLT3LGP49771 235 aa8.24□□□□□ -1.09
LINC00396-201ENST00000411690 ANKRD23Q86SG2 305 aa8.24□□□□□ -1.09
LINC00396-201ENST00000411690 CERS5Q8N5B7 392 aa8.24□□□□□ -1.09
LINC00396-201ENST00000411690 PXYLP1Q8TE99 480 aa8.24□□□□□ -1.09
LINC00396-201ENST00000411690 SPSB2Q99619 263 aa8.24□□□□□ -1.09
LINC00396-201ENST00000411690 CD209Q9NNX6 404 aa8.24□□□□□ -1.09
LINC00396-201ENST00000411690 AOX1Q06278 1338 aa8.24□□□□□ -1.09
LINC00396-201ENST00000411690 ECM29Q5VYK3 1845 aa8.24□□□□□ -1.09
LINC00396-201ENST00000411690 DLG5Q8TDM6 1919 aa8.23□□□□□ -1.09
LINC00396-201ENST00000411690 PCCAP05165 728 aaPredicted RBP8.23□□□□□ -1.09
LINC00396-201ENST00000411690 KLRK1P26718 216 aa8.23□□□□□ -1.09
LINC00396-201ENST00000411690 MDM2Q00987 491 aaPredicted RBP8.23□□□□□ -1.09
LINC00396-201ENST00000411690 INSM1Q01101 510 aaPredicted RBP8.23□□□□□ -1.09
LINC00396-201ENST00000411690 MAP3K12Q12852 859 aa8.23□□□□□ -1.09
LINC00396-201ENST00000411690 PPIL2Q13356 520 aa8.23□□□□□ -1.09
LINC00396-201ENST00000411690 NFE2L2Q16236 605 aa8.23□□□□□ -1.09
LINC00396-201ENST00000411690 CTC1Q2NKJ3 1217 aa8.23□□□□□ -1.09
LINC00396-201ENST00000411690 CYP4X1Q8N118 509 aa8.23□□□□□ -1.09
LINC00396-201ENST00000411690 JARID2Q92833 1246 aaPredicted RBP8.23□□□□□ -1.09
LINC00396-201ENST00000411690 TEPSINQ96N21 525 aa8.23□□□□□ -1.09
LINC00396-201ENST00000411690 C11orf49Q9H6J7 331 aa8.23□□□□□ -1.09
LINC00396-201ENST00000411690 ZNF70Q9UC06 446 aaPredicted RBP8.23□□□□□ -1.09
LINC00396-201ENST00000411690 FCF1Q9Y324 198 aaKnown RBP8.23□□□□□ -1.09
LINC00396-201ENST00000411690 TCP10L2B9ZVM9 353 aa8.22□□□□□ -1.09
LINC00396-201ENST00000411690 TNNI2P48788 182 aa8.22□□□□□ -1.09
LINC00396-201ENST00000411690 RPIAP49247 311 aa8.22□□□□□ -1.09
LINC00396-201ENST00000411690 SMCPP49901 116 aaPredicted RBP8.22□□□□□ -1.09
LINC00396-201ENST00000411690 IRF5Q13568 498 aa8.22□□□□□ -1.09
LINC00396-201ENST00000411690 RIC3Q7Z5B4 369 aa8.22□□□□□ -1.09
LINC00396-201ENST00000411690 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.22□□□□□ -1.09
LINC00396-201ENST00000411690 MYLIPQ8WY64 445 aa8.22□□□□□ -1.09
LINC00396-201ENST00000411690 ZKSCAN4Q969J2 545 aaPredicted RBP8.22□□□□□ -1.09
LINC00396-201ENST00000411690 TMEM39BQ9GZU3 492 aa8.22□□□□□ -1.09
LINC00396-201ENST00000411690 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC00396-201ENST00000411690 SEMA6BQ9H3T3 888 aa8.22□□□□□ -1.09
LINC00396-201ENST00000411690 TDRD3Q9H7E2 651 aaKnown RBP8.22□□□□□ -1.09
LINC00396-201ENST00000411690 BABAM1Q9NWV8 329 aa8.22□□□□□ -1.09
LINC00396-201ENST00000411690 DBF4Q9UBU7 674 aaPredicted RBP8.22□□□□□ -1.09
LINC00396-201ENST00000411690 SNCAIPQ9Y6H5 919 aa8.22□□□□□ -1.09
LINC00396-201ENST00000411690 BCRP11274 1271 aa8.21□□□□□ -1.1
LINC00396-201ENST00000411690 SNRPBP14678 240 aaKnown RBP8.21□□□□□ -1.1
LINC00396-201ENST00000411690 KCNJ4P48050 445 aa8.21□□□□□ -1.1
LINC00396-201ENST00000411690 FKBP1AP62942 108 aaKnown RBP8.21□□□□□ -1.1
LINC00396-201ENST00000411690 PPATQ06203 517 aa8.21□□□□□ -1.1
LINC00396-201ENST00000411690 HDGFL1Q5TGJ6 251 aa8.21□□□□□ -1.1
LINC00396-201ENST00000411690 CCDC191Q8NCU4 936 aa8.21□□□□□ -1.1
LINC00396-201ENST00000411690 WRNIP1Q96S55 665 aa8.21□□□□□ -1.1
LINC00396-201ENST00000411690 PLEKHF1Q96S99 279 aa8.21□□□□□ -1.1
LINC00396-201ENST00000411690 PARK7Q99497 189 aaKnown RBP8.21□□□□□ -1.1
LINC00396-201ENST00000411690 ANKRD2Q9GZV1 360 aa8.21□□□□□ -1.1
LINC00396-201ENST00000411690 HYPKQ9NX55 129 aa8.21□□□□□ -1.1
LINC00396-201ENST00000411690 COL2A1P02458 1487 aaPredicted RBP8.2□□□□□ -1.1
LINC00396-201ENST00000411690 TNPO2O14787 897 aaKnown RBP8.2□□□□□ -1.1
LINC00396-201ENST00000411690 FOSL2P15408 326 aa8.2□□□□□ -1.1
LINC00396-201ENST00000411690 IGHMBP2P38935 993 aaKnown RBP8.2□□□□□ -1.1
LINC00396-201ENST00000411690 CTSWP56202 376 aa8.2□□□□□ -1.1
LINC00396-201ENST00000411690 KRT24Q2M2I5 525 aa8.2□□□□□ -1.1
LINC00396-201ENST00000411690 SPRYD3Q8NCJ5 442 aa8.2□□□□□ -1.1
LINC00396-201ENST00000411690 TTLL11Q8NHH1 800 aa8.2□□□□□ -1.1
LINC00396-201ENST00000411690 MYD88Q99836 296 aa8.2□□□□□ -1.1
LINC00396-201ENST00000411690 LBHD1Q9BQE6 289 aaPredicted RBP8.2□□□□□ -1.1
LINC00396-201ENST00000411690 GREM2Q9H772 168 aa8.2□□□□□ -1.1
LINC00396-201ENST00000411690 CWC25Q9NXE8 425 aaPredicted RBP8.2□□□□□ -1.1
LINC00396-201ENST00000411690 VCANP13611 3396 aa8.2□□□□□ -1.1
LINC00396-201ENST00000411690 SPTBN5Q9NRC6 3674 aaKnown RBP8.19□□□□□ -1.1
LINC00396-201ENST00000411690 CYP2C8P10632 490 aa8.19□□□□□ -1.1
LINC00396-201ENST00000411690 PPP2R1AP30153 589 aa8.19□□□□□ -1.1
LINC00396-201ENST00000411690 DZIP1LQ8IYY4 767 aaKnown RBP8.19□□□□□ -1.1
LINC00396-201ENST00000411690 HOOK2Q96ED9 719 aa8.19□□□□□ -1.1
LINC00396-201ENST00000411690 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
LINC00396-201ENST00000411690 PRDM9Q9NQV7 894 aa8.19□□□□□ -1.1
LINC00396-201ENST00000411690 SERPINA10Q9UK55 444 aa8.19□□□□□ -1.1
LINC00396-201ENST00000411690 JAG2Q9Y219 1238 aa8.19□□□□□ -1.1
LINC00396-201ENST00000411690 SYNGAP1Q96PV0 1343 aa8.19□□□□□ -1.1
LINC00396-201ENST00000411690 MAPK8IP3Q9UPT6 1336 aa8.19□□□□□ -1.1
LINC00396-201ENST00000411690 MGAMO43451 1857 aa8.19□□□□□ -1.1
LINC00396-201ENST00000411690 LOC100996750A0A140TA64 210 aa8.18□□□□□ -1.1
LINC00396-201ENST00000411690 TERTO14746 1132 aaKnown RBP8.18□□□□□ -1.1
LINC00396-201ENST00000411690 IL1R1P14778 569 aa8.18□□□□□ -1.1
LINC00396-201ENST00000411690 ZNF804AQ7Z570 1209 aa8.18□□□□□ -1.1
LINC00396-201ENST00000411690 COA7Q96BR5 231 aa8.18□□□□□ -1.1
LINC00396-201ENST00000411690 MPHOSPH8Q99549 860 aa8.18□□□□□ -1.1
LINC00396-201ENST00000411690 KRTAP4-6Q9BYQ5 205 aa8.18□□□□□ -1.1
LINC00396-201ENST00000411690 PNNQ9H307 717 aaKnown RBP8.18□□□□□ -1.1
LINC00396-201ENST00000411690 ATP13A2Q9NQ11 1180 aa8.18□□□□□ -1.1
LINC00396-201ENST00000411690 TTF2Q9UNY4 1162 aaKnown RBP8.18□□□□□ -1.1
LINC00396-201ENST00000411690 KCNH4Q9UQ05 1017 aa8.18□□□□□ -1.1
LINC00396-201ENST00000411690 PFASO15067 1338 aa8.18□□□□□ -1.1
LINC00396-201ENST00000411690 DDX60LQ5H9U9 1706 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms