RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 SNW1Q13573 536 aaKnown RBP13.66□□□□□ -0.22
COL25A1-202ENST00000399127 GNL2Q13823 731 aaKnown RBP13.66□□□□□ -0.22
COL25A1-202ENST00000399127 SYNE3Q6ZMZ3 975 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 AKT1S1Q96B36 256 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 RTEL1Q9NZ71 1219 aa13.66□□□□□ -0.22
COL25A1-202ENST00000399127 TERF1P54274 439 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 EZH2Q15910 746 aaKnown RBP13.65□□□□□ -0.22
COL25A1-202ENST00000399127 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 ATL3Q6DD88 541 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 SASS6Q6UVJ0 657 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 LINC00301Q8NCQ3 95 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 RPGRQ92834 1020 aaKnown RBP13.65□□□□□ -0.22
COL25A1-202ENST00000399127 UBAC1Q9BSL1 405 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 DNAJC25Q9H1X3 360 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 RNF41Q9H4P4 317 aaPredicted RBP13.65□□□□□ -0.22
COL25A1-202ENST00000399127 CCDC39Q9UFE4 941 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
COL25A1-202ENST00000399127 OFD1O75665 1012 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 ZSCAN20P17040 1043 aaPredicted RBP13.65□□□□□ -0.22
COL25A1-202ENST00000399127 HS1BP3Q53T59 392 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 BRAPQ7Z569 592 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 FAM200AQ8TCP9 573 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 MYH13Q9UKX3 1938 aa13.65□□□□□ -0.22
COL25A1-202ENST00000399127 TNKSO95271 1327 aa13.64□□□□□ -0.23
COL25A1-202ENST00000399127 USP17L12C9JPN9 530 aa13.64□□□□□ -0.23
COL25A1-202ENST00000399127 USP17L21D6R901 530 aa13.64□□□□□ -0.23
COL25A1-202ENST00000399127 KINO60870 393 aaKnown RBP13.64□□□□□ -0.23
COL25A1-202ENST00000399127 RBM43Q6ZSC3 357 aaKnown RBP13.64□□□□□ -0.23
COL25A1-202ENST00000399127 MARCKSP29966 332 aaPredicted RBP13.64□□□□□ -0.23
COL25A1-202ENST00000399127 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
COL25A1-202ENST00000399127 SSRP1Q08945 709 aaKnown RBP13.64□□□□□ -0.23
COL25A1-202ENST00000399127 RTN1Q16799 776 aa13.64□□□□□ -0.23
COL25A1-202ENST00000399127 ESR2Q92731 530 aa13.64□□□□□ -0.23
COL25A1-202ENST00000399127 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
COL25A1-202ENST00000399127 CBX8Q9HC52 389 aa13.64□□□□□ -0.23
COL25A1-202ENST00000399127 POLRMTO00411 1230 aaKnown RBP13.63□□□□□ -0.23
COL25A1-202ENST00000399127 SEMA3EO15041 775 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 SPTLC2O15270 562 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 ANO1Q5XXA6 986 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 CTR9Q6PD62 1173 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 MTERF4Q7Z6M4 381 aaKnown RBP13.63□□□□□ -0.23
COL25A1-202ENST00000399127 ZNF654Q8IZM8 581 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 ENGASEQ8NFI3 743 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 POLR3EQ9NVU0 708 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 ZKSCAN5Q9Y2L8 839 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 MYH2Q9UKX2 1941 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 ECM29Q5VYK3 1845 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 CYP2D6P10635 497 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 NDUFA8P51970 172 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 GRAPQ13588 217 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 TRIM29Q14134 588 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 GRAPLQ8TC17 118 aaPredicted RBP13.63□□□□□ -0.23
COL25A1-202ENST00000399127 MRPS27Q92552 414 aaKnown RBP13.63□□□□□ -0.23
COL25A1-202ENST00000399127 KCNJ14Q9UNX9 436 aa13.63□□□□□ -0.23
COL25A1-202ENST00000399127 ADALQ6DHV7 355 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.62□□□□□ -0.23
COL25A1-202ENST00000399127 DZIP1Q86YF9 867 aaKnown RBP13.62□□□□□ -0.23
COL25A1-202ENST00000399127 ENAHQ8N8S7 591 aaPredicted RBP13.62□□□□□ -0.23
COL25A1-202ENST00000399127 KCNG4Q8TDN1 519 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 BRIP1Q9BX63 1249 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 ANAPC4Q9UJX5 808 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 hCG_1642624A0A1W2PR95 340 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 NMT2O60551 498 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 FMNL1O95466 1100 aaPredicted RBP13.62□□□□□ -0.23
COL25A1-202ENST00000399127 IFNAR1P17181 557 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 ZNF165P49910 485 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 NLGN1Q8N2Q7 840 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 FANCBQ8NB91 859 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 SPC24Q8NBT2 197 aa13.62□□□□□ -0.23
COL25A1-202ENST00000399127 ZFP91Q96JP5 570 aaPredicted RBP13.62□□□□□ -0.23
COL25A1-202ENST00000399127 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL25A1-202ENST00000399127 YEATS4O95619 227 aa13.61□□□□□ -0.23
COL25A1-202ENST00000399127 SF3B2Q13435 895 aaKnown RBP13.61□□□□□ -0.23
COL25A1-202ENST00000399127 DIXDC1Q155Q3 683 aa13.61□□□□□ -0.23
COL25A1-202ENST00000399127 GRIK5Q16478 980 aa13.61□□□□□ -0.23
COL25A1-202ENST00000399127 FLAD1Q8NFF5 587 aa13.61□□□□□ -0.23
COL25A1-202ENST00000399127 ZSCAN10Q96SZ4 725 aaPredicted RBP13.61□□□□□ -0.23
COL25A1-202ENST00000399127 DCP1AQ9NPI6 582 aaPredicted RBP13.61□□□□□ -0.23
COL25A1-202ENST00000399127 IRS2Q9Y4H2 1338 aa13.61□□□□□ -0.23
COL25A1-202ENST00000399127 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
COL25A1-202ENST00000399127 MMP10P09238 476 aa13.61□□□□□ -0.23
COL25A1-202ENST00000399127 SEC23AQ15436 765 aa13.61□□□□□ -0.23
COL25A1-202ENST00000399127 FAM47AQ5JRC9 791 aa13.61□□□□□ -0.23
COL25A1-202ENST00000399127 C11orf57Q6ZUT1 292 aaPredicted RBP13.61□□□□□ -0.23
COL25A1-202ENST00000399127 TRIM22Q8IYM9 498 aa13.61□□□□□ -0.23
COL25A1-202ENST00000399127 FMR1NBQ8N0W7 255 aaPredicted RBP13.61□□□□□ -0.23
COL25A1-202ENST00000399127 SDF4Q9BRK5 362 aa13.61□□□□□ -0.23
COL25A1-202ENST00000399127 CRNKL1Q9BZJ0 848 aaKnown RBP13.61□□□□□ -0.23
COL25A1-202ENST00000399127 TTC12Q9H892 705 aaPredicted RBP13.61□□□□□ -0.23
COL25A1-202ENST00000399127 BTBD18B2RXH4 712 aa13.6□□□□□ -0.23
COL25A1-202ENST00000399127 RBM17Q96I25 401 aaKnown RBP13.6□□□□□ -0.23
COL25A1-202ENST00000399127 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL25A1-202ENST00000399127 MROH7-TTC4A0A0A0MT08 1334 aa13.6□□□□□ -0.23
COL25A1-202ENST00000399127 GPSM2P81274 684 aa13.6□□□□□ -0.23
COL25A1-202ENST00000399127 IFIT1BQ5T764 474 aaKnown RBP13.6□□□□□ -0.23
COL25A1-202ENST00000399127 DEFB132Q7Z7B7 95 aa13.6□□□□□ -0.23
COL25A1-202ENST00000399127 NBPF11Q86T75 865 aa13.6□□□□□ -0.23
COL25A1-202ENST00000399127 TMTC2Q8N394 836 aa13.6□□□□□ -0.23
COL25A1-202ENST00000399127 CRACR2BQ8N4Y2 399 aaPredicted RBP13.6□□□□□ -0.23
COL25A1-202ENST00000399127 PARP3Q9Y6F1 533 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms