RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 SEC62Q99442 399 aaKnown RBP17.03■□□□□ 0.32
CYLD-202ENST00000398568 PREPLQ4J6C6 727 aaPredicted RBP17.03■□□□□ 0.32
CYLD-202ENST00000398568 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
CYLD-202ENST00000398568 NAA15Q9BXJ9 866 aaKnown RBP17.03■□□□□ 0.32
CYLD-202ENST00000398568 U3KPZ7 1027 aaPredicted RBP17.03■□□□□ 0.32
CYLD-202ENST00000398568 FLT4P35916 1363 aa17.03■□□□□ 0.32
CYLD-202ENST00000398568 A0A1B0GUA9 196 aa17.03■□□□□ 0.32
CYLD-202ENST00000398568 ALDH1L1O75891 902 aa17.03■□□□□ 0.32
CYLD-202ENST00000398568 IRX1P78414 480 aaPredicted RBP17.03■□□□□ 0.32
CYLD-202ENST00000398568 INTS13Q9NVM9 706 aa17.03■□□□□ 0.32
CYLD-202ENST00000398568 JMYQ8N9B5 988 aa17.02■□□□□ 0.32
CYLD-202ENST00000398568 GDAP1L1Q96MZ0 367 aa17.02■□□□□ 0.32
CYLD-202ENST00000398568 TRIM6Q9C030 488 aaPredicted RBP17.02■□□□□ 0.32
CYLD-202ENST00000398568 SNRKQ9NRH2 765 aa17.02■□□□□ 0.32
CYLD-202ENST00000398568 TUBE1Q9UJT0 475 aa17.02■□□□□ 0.32
CYLD-202ENST00000398568 MYO6Q9UM54 1294 aa17.02■□□□□ 0.32
CYLD-202ENST00000398568 GOLGA6BA6NDN3 693 aa17.02■□□□□ 0.31
CYLD-202ENST00000398568 TAF5LO75529 589 aa17.02■□□□□ 0.31
CYLD-202ENST00000398568 HMGB1P09429 215 aaKnown RBP17.02■□□□□ 0.31
CYLD-202ENST00000398568 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.31
CYLD-202ENST00000398568 CPLX3Q8WVH0 158 aa17.02■□□□□ 0.31
CYLD-202ENST00000398568 POLR3EQ9NVU0 708 aa17.02■□□□□ 0.31
CYLD-202ENST00000398568 CEP85LQ5SZL2 805 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 NAIF1Q69YI7 327 aaPredicted RBP17.01■□□□□ 0.31
CYLD-202ENST00000398568 PANX2Q96RD6 677 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 CCDC8Q9H0W5 538 aaPredicted RBP17.01■□□□□ 0.31
CYLD-202ENST00000398568 TTF2Q9UNY4 1162 aaKnown RBP17.01■□□□□ 0.31
CYLD-202ENST00000398568 FSBPO95073 299 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 TFRCP02786 760 aaKnown RBP17.01■□□□□ 0.31
CYLD-202ENST00000398568 PAX7P23759 505 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 CLNS1AP54105 237 aaKnown RBP17.01■□□□□ 0.31
CYLD-202ENST00000398568 PNOCQ13519 176 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 CRYMQ14894 314 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 RNF187Q5TA31 235 aaPredicted RBP17.01■□□□□ 0.31
CYLD-202ENST00000398568 A6NNZ2 444 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 CTDNEP1O95476 244 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 TUBB8Q3ZCM7 444 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 GRIPAP1Q4V328 841 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 CEP57Q86XR8 500 aa17.01■□□□□ 0.31
CYLD-202ENST00000398568 NCOA5Q9HCD5 579 aaKnown RBP17.01■□□□□ 0.31
CYLD-202ENST00000398568 MEFVO15553 781 aaPredicted RBP17■□□□□ 0.31
CYLD-202ENST00000398568 USP14P54578 494 aa17■□□□□ 0.31
CYLD-202ENST00000398568 ATP2B2Q01814 1243 aa17■□□□□ 0.31
CYLD-202ENST00000398568 C8orf76Q96K31 380 aa17■□□□□ 0.31
CYLD-202ENST00000398568 CDC5LQ99459 802 aaKnown RBP17■□□□□ 0.31
CYLD-202ENST00000398568 NEDD4P46934 1319 aa17■□□□□ 0.31
CYLD-202ENST00000398568 CAMTA1Q9Y6Y1 1673 aa17■□□□□ 0.31
CYLD-202ENST00000398568 EHD4Q9H223 541 aa17■□□□□ 0.31
CYLD-202ENST00000398568 KLC4Q9NSK0 619 aa17■□□□□ 0.31
CYLD-202ENST00000398568 EZRP15311 586 aaKnown RBP17■□□□□ 0.31
CYLD-202ENST00000398568 G3BP1Q13283 466 aaKnown RBP eCLIP17■□□□□ 0.31
CYLD-202ENST00000398568 TAF7Q15545 349 aaPredicted RBP17■□□□□ 0.31
CYLD-202ENST00000398568 NCAPH2Q6IBW4 605 aa17■□□□□ 0.31
CYLD-202ENST00000398568 RAD9BQ6WBX8 426 aa17■□□□□ 0.31
CYLD-202ENST00000398568 FAXDC2Q96IV6 333 aa17■□□□□ 0.31
CYLD-202ENST00000398568 NFE2L3Q9Y4A8 694 aa17■□□□□ 0.31
CYLD-202ENST00000398568 MARCKSP29966 332 aaPredicted RBP16.99■□□□□ 0.31
CYLD-202ENST00000398568 DHX32Q7L7V1 743 aaKnown RBP16.99■□□□□ 0.31
CYLD-202ENST00000398568 PHAXQ9H814 394 aaKnown RBP16.99■□□□□ 0.31
CYLD-202ENST00000398568 DACH1Q9UI36 760 aa16.99■□□□□ 0.31
CYLD-202ENST00000398568 NFAT5O94916 1531 aa16.99■□□□□ 0.31
CYLD-202ENST00000398568 MTHFSDQ2M296 383 aaKnown RBP16.99■□□□□ 0.31
CYLD-202ENST00000398568 ANO1Q5XXA6 986 aa16.99■□□□□ 0.31
CYLD-202ENST00000398568 RUFY1Q96T51 708 aa16.99■□□□□ 0.31
CYLD-202ENST00000398568 PA2G4Q9UQ80 394 aaKnown RBP16.99■□□□□ 0.31
CYLD-202ENST00000398568 MED23Q9ULK4 1368 aa16.99■□□□□ 0.31
CYLD-202ENST00000398568 FNTAP49354 379 aa16.99■□□□□ 0.31
CYLD-202ENST00000398568 MYSM1Q5VVJ2 828 aa16.99■□□□□ 0.31
CYLD-202ENST00000398568 TTC19Q6DKK2 380 aaPredicted RBP16.99■□□□□ 0.31
CYLD-202ENST00000398568 CCDC70Q6NSX1 233 aa16.99■□□□□ 0.31
CYLD-202ENST00000398568 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
CYLD-202ENST00000398568 OPA1O60313 960 aa16.98■□□□□ 0.31
CYLD-202ENST00000398568 OTUD7BQ6GQQ9 843 aa16.98■□□□□ 0.31
CYLD-202ENST00000398568 BRAPQ7Z569 592 aa16.98■□□□□ 0.31
CYLD-202ENST00000398568 ANKRD18AQ8IVF6 992 aa16.98■□□□□ 0.31
CYLD-202ENST00000398568 GOLGA8KD6RF30 607 aa16.98■□□□□ 0.31
CYLD-202ENST00000398568 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
CYLD-202ENST00000398568 USPL1Q5W0Q7 1092 aa16.98■□□□□ 0.31
CYLD-202ENST00000398568 ATXN2Q99700 1313 aaKnown RBP16.98■□□□□ 0.31
CYLD-202ENST00000398568 KAT6BQ8WYB5 2073 aa16.98■□□□□ 0.31
CYLD-202ENST00000398568 ZKSCAN8Q15776 578 aaPredicted RBP16.97■□□□□ 0.31
CYLD-202ENST00000398568 CCDC102BQ68D86 513 aa16.97■□□□□ 0.31
CYLD-202ENST00000398568 POTEAQ6S8J7 498 aa16.97■□□□□ 0.31
CYLD-202ENST00000398568 MYO1AQ9UBC5 1043 aa16.97■□□□□ 0.31
CYLD-202ENST00000398568 A0A0U1RQJ8 604 aa16.97■□□□□ 0.31
CYLD-202ENST00000398568 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
CYLD-202ENST00000398568 ATRIPQ8WXE1 791 aa16.97■□□□□ 0.31
CYLD-202ENST00000398568 C9orf78Q9NZ63 289 aaPredicted RBP16.97■□□□□ 0.31
CYLD-202ENST00000398568 ACTN3Q08043 901 aaPredicted RBP16.97■□□□□ 0.31
CYLD-202ENST00000398568 CCDC40Q4G0X9 1142 aa16.97■□□□□ 0.31
CYLD-202ENST00000398568 RASGRP2Q7LDG7 609 aa16.97■□□□□ 0.31
CYLD-202ENST00000398568 RGS17Q9UGC6 210 aaPredicted RBP16.97■□□□□ 0.31
CYLD-202ENST00000398568 SELENOOQ9BVL4 669 aa16.96■□□□□ 0.31
CYLD-202ENST00000398568 MARF1Q9Y4F3 1742 aaKnown RBP16.96■□□□□ 0.31
CYLD-202ENST00000398568 CYP21A2P08686 494 aa16.96■□□□□ 0.31
CYLD-202ENST00000398568 WDR17Q8IZU2 1322 aa16.96■□□□□ 0.31
CYLD-202ENST00000398568 EIF2S2P20042 333 aaKnown RBP16.96■□□□□ 0.31
CYLD-202ENST00000398568 SSR1P43307 286 aaKnown RBP16.96■□□□□ 0.31
CYLD-202ENST00000398568 NAA25Q14CX7 972 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms