RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 C21orf2O43822 256 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 PTCD1O75127 700 aaKnown RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 OFD1O75665 1012 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 SASH3O75995 380 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 UQCRHP07919 91 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 RARAP10276 462 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 GLB1P16278 677 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 EPB42P16452 691 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 TARSP26639 723 aaKnown RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 IRAK1P51617 712 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 HIRAP54198 1017 aaPredicted RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 HSPA2P54652 639 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 CCDC173Q0VFZ6 552 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 HDGFL1Q5TGJ6 251 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 GDF6Q6KF10 455 aaPredicted RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 DHX32Q7L7V1 743 aaKnown RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 AGGF1Q8N302 714 aaeCLIP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 NFATC2IPQ8NCF5 419 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 MNS1Q8NEH6 495 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 NGDNQ8NEJ9 315 aaKnown RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 PMFBP1Q8TBY8 1022 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 COG3Q96JB2 828 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 TIGD1Q96MW7 591 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 MYCBPQ99417 103 aaPredicted RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 LPIN3Q9BQK8 851 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 GGNBP2Q9H3C7 697 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 AKTIPQ9H8T0 292 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 KLK14Q9P0G3 267 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 CALCOCO1Q9P1Z2 691 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 KCNG1Q9UIX4 513 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 USP20Q9Y2K6 914 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 AFDNP55196 1824 aaKnown RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 INSRP06213 1382 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 AK9Q5TCS8 1911 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 C1orf167Q5SNV9 1468 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 KDM3BQ7LBC6 1761 aa3.2□□□□□ -1.9
TRAV41-201ENST00000390468 N4BP2Q86UW6 1770 aaPredicted RBP3.2□□□□□ -1.9
TRAV41-201ENST00000390468 TTC21BQ7Z4L5 1316 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 MST1RQ04912 1400 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 SLIT3O75094 1523 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 PKD1L3Q7Z443 1732 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 SHANK3Q9BYB0 1731 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 GOLGA6L6A8MZA4 724 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 GOLGA6L22H0YM25 854 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 GOLIM4O00461 696 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 FYB1O15117 783 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 IGSF3O75054 1194 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 DEAF1O75398 565 aaPredicted RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 FRAT2O75474 233 aaPredicted RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 ZSCAN20P17040 1043 aaPredicted RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 ATF3P18847 181 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 IDH3AP50213 366 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 MFAP1P55081 439 aaKnown RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 HMGN5P82970 282 aaKnown RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 SATB1Q01826 763 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 HIF1AQ16665 826 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 NBPF9Q3BBW0 867 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 TMCO4Q5TGY1 634 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 TMED8Q6PL24 325 aaPredicted RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 SASS6Q6UVJ0 657 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 ZSCAN30Q86W11 494 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 CREBRFQ8IUR6 639 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 LARGE2Q8N3Y3 721 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 PNISRQ8TF01 805 aaKnown RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 ZNF526Q8TF50 670 aaPredicted RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 C2orf49Q9BVC5 232 aaPredicted RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 CARD10Q9BWT7 1032 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 BACH2Q9BYV9 841 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 UPF2Q9HAU5 1272 aaKnown RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 RAI14Q9P0K7 980 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 ZFATQ9P243 1243 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 TMEM94Q12767 1356 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 IQSEC2Q5JU85 1478 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 MED1Q15648 1581 aaPredicted RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 COL14A1Q05707 1796 aaKnown RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 NWD2Q9ULI1 1742 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 LRRC37A3O60309 1634 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 COL22A1Q8NFW1 1626 aaPredicted RBP3.19□□□□□ -1.9
TRAV41-201ENST00000390468 NFAT5O94916 1531 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 SSH2Q76I76 1423 aa3.19□□□□□ -1.9
TRAV41-201ENST00000390468 LAMB4A4D0S4 1761 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 AATKQ6ZMQ8 1374 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 USP31Q70CQ4 1352 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 ZBTB42B2RXF5 422 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 TGFBR3LH3BV60 316 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 J3QW42 95 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 MAFGO15525 162 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 NRDCO43847 1150 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 ATP9BO43861 1147 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 KIF1CO43896 1103 aaKnown RBP3.18□□□□□ -1.9
TRAV41-201ENST00000390468 TGFB1P01137 390 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 RFX1P22670 979 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 CDC25BP30305 580 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 TXKP42681 527 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 MTHFSP49914 203 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 GABPB1Q06547 395 aaPredicted RBP3.18□□□□□ -1.9
TRAV41-201ENST00000390468 DGKZQ13574 1117 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 GRIK5Q16478 980 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 PCSK7Q16549 785 aa3.18□□□□□ -1.9
TRAV41-201ENST00000390468 RTN1Q16799 776 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms