RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SEC62Q99442 399 aaKnown RBP23.31■■□□□ 1.32
GTF3A-201ENST00000381140 MCM9Q9NXL9 1143 aa23.31■■□□□ 1.32
GTF3A-201ENST00000381140 SLC4A4Q9Y6R1 1079 aa23.31■■□□□ 1.32
GTF3A-201ENST00000381140 POLR3DP05423 398 aaPredicted RBP23.3■■□□□ 1.32
GTF3A-201ENST00000381140 MAP2K2P36507 400 aa23.3■■□□□ 1.32
GTF3A-201ENST00000381140 SPRYD7Q5W111 196 aa23.3■■□□□ 1.32
GTF3A-201ENST00000381140 CNKSR2Q8WXI2 1034 aa23.3■■□□□ 1.32
GTF3A-201ENST00000381140 UNCXA6NJT0 531 aa23.29■■□□□ 1.32
GTF3A-201ENST00000381140 GPAA1O43292 621 aa23.29■■□□□ 1.32
GTF3A-201ENST00000381140 OPTNQ96CV9 577 aa23.29■■□□□ 1.32
GTF3A-201ENST00000381140 DCP1AQ9NPI6 582 aaPredicted RBP23.29■■□□□ 1.32
GTF3A-201ENST00000381140 ZNF112Q9UJU3 913 aa23.29■■□□□ 1.32
GTF3A-201ENST00000381140 SNCAIPQ9Y6H5 919 aa23.29■■□□□ 1.32
GTF3A-201ENST00000381140 ZMYM1Q5SVZ6 1142 aa23.28■■□□□ 1.32
GTF3A-201ENST00000381140 TTC22Q5TAA0 569 aa23.28■■□□□ 1.32
GTF3A-201ENST00000381140 SKAP1Q86WV1 359 aa23.28■■□□□ 1.32
GTF3A-201ENST00000381140 OTUD5Q96G74 571 aa23.28■■□□□ 1.32
GTF3A-201ENST00000381140 DDRGK1Q96HY6 314 aa23.28■■□□□ 1.32
GTF3A-201ENST00000381140 STRBPQ96SI9 672 aaKnown RBP23.28■■□□□ 1.32
GTF3A-201ENST00000381140 PHF20L1A8MW92 1017 aa23.27■■□□□ 1.32
GTF3A-201ENST00000381140 TBC1D12O60347 775 aa23.27■■□□□ 1.32
GTF3A-201ENST00000381140 TTC6Q86TZ1 520 aa23.27■■□□□ 1.32
GTF3A-201ENST00000381140 HERC5Q9UII4 1024 aaKnown RBP23.27■■□□□ 1.32
GTF3A-201ENST00000381140 CYP2D6P10635 497 aa23.27■■□□□ 1.31
GTF3A-201ENST00000381140 GJA5P36382 358 aa23.27■■□□□ 1.31
GTF3A-201ENST00000381140 MAP2K1Q02750 393 aaPredicted RBP23.27■■□□□ 1.31
GTF3A-201ENST00000381140 CCDC129Q6ZRS4 1044 aa23.27■■□□□ 1.31
GTF3A-201ENST00000381140 FOXP4Q8IVH2 680 aaPredicted RBP23.27■■□□□ 1.31
GTF3A-201ENST00000381140 ATP8A2Q9NTI2 1148 aa23.27■■□□□ 1.31
GTF3A-201ENST00000381140 APPP05067 770 aa23.26■■□□□ 1.31
GTF3A-201ENST00000381140 HSPA1AP0DMV8 641 aaKnown RBP23.26■■□□□ 1.31
GTF3A-201ENST00000381140 HSPA1BP0DMV9 641 aaKnown RBP23.26■■□□□ 1.31
GTF3A-201ENST00000381140 MAP3K10Q02779 954 aa23.26■■□□□ 1.31
GTF3A-201ENST00000381140 EVX2Q03828 476 aa23.26■■□□□ 1.31
GTF3A-201ENST00000381140 FAM227BQ96M60 508 aa23.26■■□□□ 1.31
GTF3A-201ENST00000381140 PICK1Q9NRD5 415 aa23.26■■□□□ 1.31
GTF3A-201ENST00000381140 LAMB1P07942 1786 aa23.25■■□□□ 1.31
GTF3A-201ENST00000381140 SPDYE5A6NIY4 337 aa23.25■■□□□ 1.31
GTF3A-201ENST00000381140 ZBTB48P10074 688 aaPredicted RBP23.25■■□□□ 1.31
GTF3A-201ENST00000381140 GSPT1P15170 499 aaKnown RBP23.25■■□□□ 1.31
GTF3A-201ENST00000381140 PLCD1P51178 756 aa23.25■■□□□ 1.31
GTF3A-201ENST00000381140 NMIQ13287 307 aaPredicted RBP23.25■■□□□ 1.31
GTF3A-201ENST00000381140 ERO1BQ86YB8 467 aa23.25■■□□□ 1.31
GTF3A-201ENST00000381140 SCYL3Q8IZE3 742 aa23.25■■□□□ 1.31
GTF3A-201ENST00000381140 BEGAINQ9BUH8 593 aa23.25■■□□□ 1.31
GTF3A-201ENST00000381140 DNAJC18Q9H819 358 aa23.25■■□□□ 1.31
GTF3A-201ENST00000381140 SERPINB13Q9UIV8 391 aa23.25■■□□□ 1.31
GTF3A-201ENST00000381140 CYP2D7A0A087X1C5 515 aa23.24■■□□□ 1.31
GTF3A-201ENST00000381140 A0A0D9SFI3 127 aa23.24■■□□□ 1.31
GTF3A-201ENST00000381140 SDSP20132 328 aa23.24■■□□□ 1.31
GTF3A-201ENST00000381140 NOL9Q5SY16 702 aaKnown RBP23.24■■□□□ 1.31
GTF3A-201ENST00000381140 AMOTL1Q8IY63 956 aa23.24■■□□□ 1.31
GTF3A-201ENST00000381140 DIAPH3Q9NSV4 1193 aa23.24■■□□□ 1.31
GTF3A-201ENST00000381140 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.24■■□□□ 1.31
GTF3A-201ENST00000381140 PHIPQ8WWQ0 1821 aa23.24■■□□□ 1.31
GTF3A-201ENST00000381140 GSG1L2A8MUP6 293 aa23.23■■□□□ 1.31
GTF3A-201ENST00000381140 USP17L12C9JPN9 530 aa23.23■■□□□ 1.31
GTF3A-201ENST00000381140 USP17L21D6R901 530 aa23.23■■□□□ 1.31
GTF3A-201ENST00000381140 CTNND1O60716 968 aaKnown RBP23.23■■□□□ 1.31
GTF3A-201ENST00000381140 GNAT2P19087 354 aa23.23■■□□□ 1.31
GTF3A-201ENST00000381140 RRP1BQ14684 758 aaKnown RBP23.23■■□□□ 1.31
GTF3A-201ENST00000381140 HELLSQ9NRZ9 838 aa23.23■■□□□ 1.31
GTF3A-201ENST00000381140 WBP1LQ9NX94 342 aa23.23■■□□□ 1.31
GTF3A-201ENST00000381140 TDO2P48775 406 aa23.22■■□□□ 1.31
GTF3A-201ENST00000381140 CCDC84Q86UT8 332 aaPredicted RBP23.22■■□□□ 1.31
GTF3A-201ENST00000381140 EHD4Q9H223 541 aa23.22■■□□□ 1.31
GTF3A-201ENST00000381140 PCNTO95613 3336 aa23.22■■□□□ 1.31
GTF3A-201ENST00000381140 MANSC4A6NHS7 340 aaPredicted RBP23.21■■□□□ 1.31
GTF3A-201ENST00000381140 GDF11O95390 407 aa23.21■■□□□ 1.31
GTF3A-201ENST00000381140 SREBF2Q12772 1141 aa23.21■■□□□ 1.31
GTF3A-201ENST00000381140 DYNLL2Q96FJ2 89 aa23.21■■□□□ 1.31
GTF3A-201ENST00000381140 PTPRFP10586 1907 aa23.2■■□□□ 1.31
GTF3A-201ENST00000381140 SMIM22K7EJ46 135 aa23.2■■□□□ 1.3
GTF3A-201ENST00000381140 IRF6O14896 467 aa23.2■■□□□ 1.3
GTF3A-201ENST00000381140 CAP2P40123 477 aa23.2■■□□□ 1.3
GTF3A-201ENST00000381140 PPATQ06203 517 aa23.2■■□□□ 1.3
GTF3A-201ENST00000381140 PPIL2Q13356 520 aa23.2■■□□□ 1.3
GTF3A-201ENST00000381140 MCMDC2Q4G0Z9 681 aa23.2■■□□□ 1.3
GTF3A-201ENST00000381140 CTR9Q6PD62 1173 aa23.2■■□□□ 1.3
GTF3A-201ENST00000381140 CWC27Q6UX04 472 aaKnown RBP23.2■■□□□ 1.3
GTF3A-201ENST00000381140 METTL16Q86W50 562 aaKnown RBP23.2■■□□□ 1.3
GTF3A-201ENST00000381140 STK11IPQ8N1F8 1099 aa23.2■■□□□ 1.3
GTF3A-201ENST00000381140 EPB41L4AQ9HCS5 686 aaPredicted RBP23.2■■□□□ 1.3
GTF3A-201ENST00000381140 TSKSQ9UJT2 592 aa23.2■■□□□ 1.3
GTF3A-201ENST00000381140 ZHX2Q9Y6X8 837 aa23.2■■□□□ 1.3
GTF3A-201ENST00000381140 MINDY4BA8MYZ0 360 aa23.19■■□□□ 1.3
GTF3A-201ENST00000381140 PATL2C9JE40 543 aaKnown RBP23.19■■□□□ 1.3
GTF3A-201ENST00000381140 PTPRAP18433 802 aa23.19■■□□□ 1.3
GTF3A-201ENST00000381140 SHROOM1Q2M3G4 852 aaPredicted RBP23.19■■□□□ 1.3
GTF3A-201ENST00000381140 C12orf60Q5U649 245 aa23.19■■□□□ 1.3
GTF3A-201ENST00000381140 REM2Q8IYK8 340 aaPredicted RBP23.19■■□□□ 1.3
GTF3A-201ENST00000381140 SLC44A5Q8NCS7 719 aa23.19■■□□□ 1.3
GTF3A-201ENST00000381140 NACAP1Q9BZK3 213 aa23.19■■□□□ 1.3
GTF3A-201ENST00000381140 ARPP21Q9UBL0 812 aaPredicted RBP23.19■■□□□ 1.3
GTF3A-201ENST00000381140 HIP1O00291 1037 aa23.18■■□□□ 1.3
GTF3A-201ENST00000381140 FOXN1O15353 648 aa23.18■■□□□ 1.3
GTF3A-201ENST00000381140 GTF2A2P52657 109 aa23.18■■□□□ 1.3
GTF3A-201ENST00000381140 TICAM2Q86XR7 235 aa23.18■■□□□ 1.3
GTF3A-201ENST00000381140 IFNL3Q8IZI9 196 aa23.18■■□□□ 1.3
GTF3A-201ENST00000381140 CCL15-CCL14A0A0B4J2E2 113 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms