RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CTR9Q6PD62 1173 aa22.45■■□□□ 1.18
SSU72-203ENST00000378725 ZNF589Q86UQ0 364 aaPredicted RBP22.45■■□□□ 1.18
SSU72-203ENST00000378725 IFNL3Q8IZI9 196 aa22.45■■□□□ 1.18
SSU72-203ENST00000378725 WRNIP1Q96S55 665 aa22.45■■□□□ 1.18
SSU72-203ENST00000378725 ZNF157P51786 506 aaPredicted RBP22.44■■□□□ 1.18
SSU72-203ENST00000378725 GABPAQ06546 454 aa22.44■■□□□ 1.18
SSU72-203ENST00000378725 C12orf60Q5U649 245 aa22.44■■□□□ 1.18
SSU72-203ENST00000378725 CCDC171Q6TFL3 1326 aa22.44■■□□□ 1.18
SSU72-203ENST00000378725 CCDC102AQ96A19 550 aa22.44■■□□□ 1.18
SSU72-203ENST00000378725 CLMNQ96JQ2 1002 aa22.44■■□□□ 1.18
SSU72-203ENST00000378725 DNAJC18Q9H819 358 aa22.44■■□□□ 1.18
SSU72-203ENST00000378725 EPB41L4AQ9HCS5 686 aaPredicted RBP22.44■■□□□ 1.18
SSU72-203ENST00000378725 SERPINB13Q9UIV8 391 aa22.44■■□□□ 1.18
SSU72-203ENST00000378725 TAOK2Q9UL54 1235 aa22.44■■□□□ 1.18
SSU72-203ENST00000378725 FAM155AB1AL88 458 aaPredicted RBP22.43■■□□□ 1.18
SSU72-203ENST00000378725 APPP05067 770 aa22.43■■□□□ 1.18
SSU72-203ENST00000378725 CYP2D6P10635 497 aa22.43■■□□□ 1.18
SSU72-203ENST00000378725 INPP5BP32019 993 aa22.43■■□□□ 1.18
SSU72-203ENST00000378725 MFAP1P55081 439 aaKnown RBP22.43■■□□□ 1.18
SSU72-203ENST00000378725 VGLL4Q14135 290 aa22.43■■□□□ 1.18
SSU72-203ENST00000378725 SLC4A8Q2Y0W8 1093 aa22.43■■□□□ 1.18
SSU72-203ENST00000378725 NOL9Q5SY16 702 aaKnown RBP22.43■■□□□ 1.18
SSU72-203ENST00000378725 CYP4F22Q6NT55 531 aa22.43■■□□□ 1.18
SSU72-203ENST00000378725 SLC10A4Q96EP9 437 aa22.43■■□□□ 1.18
SSU72-203ENST00000378725 NACAP1Q9BZK3 213 aa22.43■■□□□ 1.18
SSU72-203ENST00000378725 ARPP21Q9UBL0 812 aaPredicted RBP22.43■■□□□ 1.18
SSU72-203ENST00000378725 DDX60LQ5H9U9 1706 aaKnown RBP22.43■■□□□ 1.18
SSU72-203ENST00000378725 FAM196BA6NMK8 535 aa22.42■■□□□ 1.18
SSU72-203ENST00000378725 CTNND1O60716 968 aaKnown RBP22.42■■□□□ 1.18
SSU72-203ENST00000378725 ECE1P42892 770 aa22.42■■□□□ 1.18
SSU72-203ENST00000378725 VEGFBP49765 207 aa22.42■■□□□ 1.18
SSU72-203ENST00000378725 ALX1Q15699 326 aa22.42■■□□□ 1.18
SSU72-203ENST00000378725 VPS53Q5VIR6 699 aa22.42■■□□□ 1.18
SSU72-203ENST00000378725 RASAL3Q86YV0 1011 aa22.42■■□□□ 1.18
SSU72-203ENST00000378725 CRACR2BQ8N4Y2 399 aaPredicted RBP22.42■■□□□ 1.18
SSU72-203ENST00000378725 RUFY2Q8WXA3 655 aa22.42■■□□□ 1.18
SSU72-203ENST00000378725 ZKSCAN4Q969J2 545 aaPredicted RBP22.42■■□□□ 1.18
SSU72-203ENST00000378725 CAPNS2Q96L46 248 aa22.42■■□□□ 1.18
SSU72-203ENST00000378725 CSADQ9Y600 493 aa22.42■■□□□ 1.18
SSU72-203ENST00000378725 WDR33Q9C0J8 1336 aaKnown RBP22.41■■□□□ 1.18
SSU72-203ENST00000378725 SLC10A3P09131 477 aa22.41■■□□□ 1.18
SSU72-203ENST00000378725 HSPD1P10809 573 aaKnown RBP22.41■■□□□ 1.18
SSU72-203ENST00000378725 EVX2Q03828 476 aa22.41■■□□□ 1.18
SSU72-203ENST00000378725 TATDN1Q6P1N9 297 aa22.41■■□□□ 1.18
SSU72-203ENST00000378725 AMOTL1Q8IY63 956 aa22.41■■□□□ 1.18
SSU72-203ENST00000378725 SNCAIPQ9Y6H5 919 aa22.41■■□□□ 1.18
SSU72-203ENST00000378725 RAD50Q92878 1312 aa22.4■■□□□ 1.18
SSU72-203ENST00000378725 AK9Q5TCS8 1911 aa22.4■■□□□ 1.18
SSU72-203ENST00000378725 CYP2D7A0A087X1C5 515 aa22.4■■□□□ 1.18
SSU72-203ENST00000378725 TDO2P48775 406 aa22.4■■□□□ 1.18
SSU72-203ENST00000378725 RRP1BQ14684 758 aaKnown RBP22.4■■□□□ 1.18
SSU72-203ENST00000378725 TRIM34Q9BYJ4 488 aa22.4■■□□□ 1.18
SSU72-203ENST00000378725 IL25Q9H293 177 aa22.4■■□□□ 1.18
SSU72-203ENST00000378725 SIPA1L1O43166 1804 aa22.4■■□□□ 1.18
SSU72-203ENST00000378725 MYH1P12882 1939 aa22.39■■□□□ 1.18
SSU72-203ENST00000378725 SMIM22K7EJ46 135 aa22.39■■□□□ 1.17
SSU72-203ENST00000378725 CAP2P40123 477 aa22.39■■□□□ 1.17
SSU72-203ENST00000378725 PAXIP1Q6ZW49 1069 aaPredicted RBP22.39■■□□□ 1.17
SSU72-203ENST00000378725 SCYL3Q8IZE3 742 aa22.39■■□□□ 1.17
SSU72-203ENST00000378725 NAPBQ9H115 298 aa22.39■■□□□ 1.17
SSU72-203ENST00000378725 ELP3Q9H9T3 547 aa22.39■■□□□ 1.17
SSU72-203ENST00000378725 NAV1Q8NEY1 1877 aa22.39■■□□□ 1.17
SSU72-203ENST00000378725 SGSM2O43147 1006 aa22.38■■□□□ 1.17
SSU72-203ENST00000378725 FGAP02671 866 aa22.38■■□□□ 1.17
SSU72-203ENST00000378725 SHMT1P34896 483 aa22.38■■□□□ 1.17
SSU72-203ENST00000378725 SPRYD7Q5W111 196 aa22.38■■□□□ 1.17
SSU72-203ENST00000378725 ERO1BQ86YB8 467 aa22.38■■□□□ 1.17
SSU72-203ENST00000378725 DYNLL2Q96FJ2 89 aa22.38■■□□□ 1.17
SSU72-203ENST00000378725 WNK4Q96J92 1243 aa22.38■■□□□ 1.17
SSU72-203ENST00000378725 SWAP70Q9UH65 585 aa22.38■■□□□ 1.17
SSU72-203ENST00000378725 ZMYM6O95789 1325 aa22.37■■□□□ 1.17
SSU72-203ENST00000378725 SPDYE5A6NIY4 337 aa22.37■■□□□ 1.17
SSU72-203ENST00000378725 MINDY4BA8MYZ0 360 aa22.37■■□□□ 1.17
SSU72-203ENST00000378725 MAP2K2P36507 400 aa22.37■■□□□ 1.17
SSU72-203ENST00000378725 NOGQ13253 232 aa22.37■■□□□ 1.17
SSU72-203ENST00000378725 C16orf86Q6ZW13 317 aa22.37■■□□□ 1.17
SSU72-203ENST00000378725 DSCC1Q9BVC3 393 aa22.37■■□□□ 1.17
SSU72-203ENST00000378725 GINM1Q9NU53 330 aa22.37■■□□□ 1.17
SSU72-203ENST00000378725 ZBTB48P10074 688 aaPredicted RBP22.36■■□□□ 1.17
SSU72-203ENST00000378725 GJA5P36382 358 aa22.36■■□□□ 1.17
SSU72-203ENST00000378725 CDK8P49336 464 aa22.36■■□□□ 1.17
SSU72-203ENST00000378725 OPTNQ96CV9 577 aa22.36■■□□□ 1.17
SSU72-203ENST00000378725 ROBO3Q96MS0 1386 aa22.36■■□□□ 1.17
SSU72-203ENST00000378725 AOC2O75106 756 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 PTPRAP18433 802 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 JAG1P78504 1218 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 PPATQ06203 517 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 PPARAQ07869 468 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 GRM1Q13255 1194 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 CERKLQ49MI3 558 aaPredicted RBP22.35■■□□□ 1.17
SSU72-203ENST00000378725 SLC44A5Q8NCS7 719 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 CNKSR2Q8WXI2 1034 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 PICK1Q9NRD5 415 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 ANAPC4Q9UJX5 808 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 OTOFQ9HC10 1997 aa22.35■■□□□ 1.17
SSU72-203ENST00000378725 CDC45O75419 566 aa22.34■■□□□ 1.17
SSU72-203ENST00000378725 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
SSU72-203ENST00000378725 ZIC5Q96T25 663 aa22.34■■□□□ 1.17
SSU72-203ENST00000378725 ESYT1Q9BSJ8 1104 aa22.34■■□□□ 1.17
SSU72-203ENST00000378725 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms