RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 RRP12Q5JTH9 1297 aaKnown RBP15.51■□□□□ 0.07
NFIX-201ENST00000358552 TRIM44Q96DX7 344 aaPredicted RBP15.51■□□□□ 0.07
NFIX-201ENST00000358552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
NFIX-201ENST00000358552 MYO3BQ8WXR4 1341 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 FER1L6Q2WGJ9 1857 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 ROBO3Q96MS0 1386 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 SNED1Q8TER0 1413 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 VPS37CA5D8V6 355 aaPredicted RBP15.51■□□□□ 0.07
NFIX-201ENST00000358552 USP17L3A6NCW0 530 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 USP17L4A6NCW7 530 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 CCT2P78371 535 aaKnown RBP15.51■□□□□ 0.07
NFIX-201ENST00000358552 USP17L1Q7RTZ2 530 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 TTC6Q86TZ1 520 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 TEX11Q8IYF3 940 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 TEKT1Q969V4 418 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 ZSCAN10Q96SZ4 725 aaPredicted RBP15.51■□□□□ 0.07
NFIX-201ENST00000358552 SCAND2PQ9GZW5 306 aaPredicted RBP15.51■□□□□ 0.07
NFIX-201ENST00000358552 JAG2Q9Y219 1238 aa15.51■□□□□ 0.07
NFIX-201ENST00000358552 DDX49Q9Y6V7 483 aaKnown RBP15.51■□□□□ 0.07
NFIX-201ENST00000358552 C21orf2O43822 256 aa15.5■□□□□ 0.07
NFIX-201ENST00000358552 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
NFIX-201ENST00000358552 POLR3DP05423 398 aaPredicted RBP15.5■□□□□ 0.07
NFIX-201ENST00000358552 KRT85P78386 507 aa15.5■□□□□ 0.07
NFIX-201ENST00000358552 DIXDC1Q155Q3 683 aa15.5■□□□□ 0.07
NFIX-201ENST00000358552 DALRD3Q5D0E6 543 aaKnown RBP15.5■□□□□ 0.07
NFIX-201ENST00000358552 CATIPQ7Z7H3 387 aa15.5■□□□□ 0.07
NFIX-201ENST00000358552 TCP11L1Q9NUJ3 509 aa15.5■□□□□ 0.07
NFIX-201ENST00000358552 LMBRD1Q9NUN5 540 aa15.5■□□□□ 0.07
NFIX-201ENST00000358552 RBM28Q9NW13 759 aaKnown RBP15.5■□□□□ 0.07
NFIX-201ENST00000358552 CFAP45Q9UL16 551 aa15.5■□□□□ 0.07
NFIX-201ENST00000358552 TTF2Q9UNY4 1162 aaKnown RBP15.5■□□□□ 0.07
NFIX-201ENST00000358552 HPS5Q9UPZ3 1129 aa15.5■□□□□ 0.07
NFIX-201ENST00000358552 STK36Q9NRP7 1315 aa15.5■□□□□ 0.07
NFIX-201ENST00000358552 MYH2Q9UKX2 1941 aa15.49■□□□□ 0.07
NFIX-201ENST00000358552 RANBP6O60518 1105 aaKnown RBP15.49■□□□□ 0.07
NFIX-201ENST00000358552 PPP4R3BQ5MIZ7 849 aa15.49■□□□□ 0.07
NFIX-201ENST00000358552 DGKHQ86XP1 1220 aa15.49■□□□□ 0.07
NFIX-201ENST00000358552 TRIM22Q8IYM9 498 aa15.49■□□□□ 0.07
NFIX-201ENST00000358552 SH3RF3Q8TEJ3 882 aaPredicted RBP15.49■□□□□ 0.07
NFIX-201ENST00000358552 SYAP1Q96A49 352 aaPredicted RBP15.49■□□□□ 0.07
NFIX-201ENST00000358552 MAP3K14Q99558 947 aa15.49■□□□□ 0.07
NFIX-201ENST00000358552 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
NFIX-201ENST00000358552 GOLGA8AA7E2F4 631 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 ECE2O60344 883 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 PRPF40AO75400 957 aaKnown RBP15.48■□□□□ 0.07
NFIX-201ENST00000358552 DDAH1O94760 285 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 CTDNEP1O95476 244 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 CCDC173Q0VFZ6 552 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 IFIT1BQ5T764 474 aaKnown RBP15.48■□□□□ 0.07
NFIX-201ENST00000358552 ZNF444Q8N0Y2 327 aaPredicted RBP15.48■□□□□ 0.07
NFIX-201ENST00000358552 TGFBRAP1Q8WUH2 860 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 MKNK2Q9HBH9 465 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 SERPINA10Q9UK55 444 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 JAK2O60674 1132 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 IFNAR1P17181 557 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 CLCN1P35523 988 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 IARSP41252 1262 aaKnown RBP15.48■□□□□ 0.07
NFIX-201ENST00000358552 RHBDL3P58872 404 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 ZNF445P59923 1031 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 SEC23AQ15436 765 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 DOK7Q18PE1 504 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 ANKS1AQ92625 1134 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 FBXW7Q969H0 707 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 ZDHHC15Q96MV8 337 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 ORC3Q9UBD5 711 aaPredicted RBP15.48■□□□□ 0.07
NFIX-201ENST00000358552 DAGLAQ9Y4D2 1042 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 TNKSO95271 1327 aa15.48■□□□□ 0.07
NFIX-201ENST00000358552 TSPY2A6NKD2 308 aa15.47■□□□□ 0.07
NFIX-201ENST00000358552 RTN1Q16799 776 aa15.47■□□□□ 0.07
NFIX-201ENST00000358552 NLGN2Q8NFZ4 835 aa15.47■□□□□ 0.07
NFIX-201ENST00000358552 C8orf76Q96K31 380 aa15.47■□□□□ 0.07
NFIX-201ENST00000358552 RBM27Q9P2N5 1060 aaKnown RBP15.47■□□□□ 0.07
NFIX-201ENST00000358552 ELP1O95163 1332 aa15.47■□□□□ 0.07
NFIX-201ENST00000358552 SRCAPQ6ZRS2 3230 aa15.46■□□□□ 0.07
NFIX-201ENST00000358552 PPIP5K2O43314 1243 aa15.46■□□□□ 0.07
NFIX-201ENST00000358552 SSRP1Q08945 709 aaKnown RBP15.46■□□□□ 0.07
NFIX-201ENST00000358552 DACT2Q5SW24 774 aa15.46■□□□□ 0.07
NFIX-201ENST00000358552 MICU3Q86XE3 530 aa15.46■□□□□ 0.07
NFIX-201ENST00000358552 FANCBQ8NB91 859 aa15.46■□□□□ 0.07
NFIX-201ENST00000358552 DDX11Q96FC9 970 aa15.46■□□□□ 0.07
NFIX-201ENST00000358552 ZNF396Q96N95 335 aaPredicted RBP15.46■□□□□ 0.07
NFIX-201ENST00000358552 FHDC1Q9C0D6 1143 aaPredicted RBP15.46■□□□□ 0.07
NFIX-201ENST00000358552 NCOA5Q9HCD5 579 aaKnown RBP15.46■□□□□ 0.07
NFIX-201ENST00000358552 SWAP70Q9UH65 585 aa15.46■□□□□ 0.07
NFIX-201ENST00000358552 XBP1P17861 261 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 FLT1P17948 1338 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 KIF5BP33176 963 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 UBE2HP62256 183 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 TRIM29Q14134 588 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 GRIK5Q16478 980 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 FOXD4L5Q5VV16 416 aaPredicted RBP15.46■□□□□ 0.06
NFIX-201ENST00000358552 C16orf86Q6ZW13 317 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 BRAPQ7Z569 592 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 ZNF654Q8IZM8 581 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 FBXO18Q8NFZ0 1043 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 FOXD4L4Q8WXT5 416 aaPredicted RBP15.46■□□□□ 0.06
NFIX-201ENST00000358552 DHX36Q9H2U1 1008 aaKnown RBP15.46■□□□□ 0.06
NFIX-201ENST00000358552 DBNDD1Q9H9R9 158 aa15.46■□□□□ 0.06
NFIX-201ENST00000358552 LAMB1P07942 1786 aa15.45■□□□□ 0.06
NFIX-201ENST00000358552 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms