RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 RNF216Q9NWF9 866 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-205ENST00000357568 CYP19A1P11511 503 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-205ENST00000357568 CCT2P78371 535 aaKnown RBP12.18□□□□□ -0.46
CAPN3-205ENST00000357568 PTPN12Q05209 780 aaKnown RBP12.18□□□□□ -0.46
CAPN3-205ENST00000357568 BEND6Q5SZJ8 279 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-205ENST00000357568 RESP18Q5W5W9 173 aa12.18□□□□□ -0.46
CAPN3-205ENST00000357568 TRIML1Q8N9V2 468 aa12.18□□□□□ -0.46
CAPN3-205ENST00000357568 DPF2Q92785 391 aa12.18□□□□□ -0.46
CAPN3-205ENST00000357568 ERCC4Q92889 916 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-205ENST00000357568 WDR24Q96S15 920 aa12.18□□□□□ -0.46
CAPN3-205ENST00000357568 METTL22Q9BUU2 404 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-205ENST00000357568 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.18□□□□□ -0.46
CAPN3-205ENST00000357568 C4AP0C0L4 1744 aa12.18□□□□□ -0.46
CAPN3-205ENST00000357568 H3BQF6 201 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 CUTAO60888 179 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 ZNF18P17022 549 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 CCDC129Q6ZRS4 1044 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 DEFB132Q7Z7B7 95 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 TC2NQ8N9U0 490 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 FAM71BQ8TC56 605 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 LRRC2Q9BYS8 371 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 MED4Q9NPJ6 270 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 LRRC4BQ9NT99 713 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 CDC23Q9UJX2 597 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 SOCS7O14512 581 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 CCDC175P0C221 793 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 LMAN1P49257 510 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 ENOX1Q8TC92 643 aaKnown RBP12.17□□□□□ -0.46
CAPN3-205ENST00000357568 EDC3Q96F86 508 aaKnown RBP12.17□□□□□ -0.46
CAPN3-205ENST00000357568 NCOA5Q9HCD5 579 aaKnown RBP12.17□□□□□ -0.46
CAPN3-205ENST00000357568 INTS13Q9NVM9 706 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 MROH7-TTC4A0A0A0MT08 1334 aa12.17□□□□□ -0.46
CAPN3-205ENST00000357568 BIN1O00499 593 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 CPP00450 1065 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 HSPD1P10809 573 aaKnown RBP12.16□□□□□ -0.46
CAPN3-205ENST00000357568 TFCP2Q12800 502 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 GNL2Q13823 731 aaKnown RBP12.16□□□□□ -0.46
CAPN3-205ENST00000357568 PDIA6Q15084 440 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 NT5DC1Q5TFE4 455 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 MLKLQ8NB16 471 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 SEC62Q99442 399 aaKnown RBP12.16□□□□□ -0.46
CAPN3-205ENST00000357568 VIPAS39Q9H9C1 493 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 ZCCHC17Q9NP64 241 aaKnown RBP12.16□□□□□ -0.46
CAPN3-205ENST00000357568 GEMIN8Q9NWZ8 242 aaKnown RBP12.16□□□□□ -0.46
CAPN3-205ENST00000357568 L1RE1Q9UN81 338 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 UBR3Q6ZT12 1888 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 FECHP22830 423 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 ICE2Q659A1 982 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 DHX58Q96C10 678 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 FAM107BQ9H098 131 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 CCDC87Q9NVE4 849 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 MYO1AQ9UBC5 1043 aa12.16□□□□□ -0.46
CAPN3-205ENST00000357568 GUCY1B3Q02153 619 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 CCDC102BQ68D86 513 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 FBXW7Q969H0 707 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 CCDC51Q96ER9 411 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 PAG1Q9NWQ8 432 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 ABCC12Q96J65 1359 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 WDHD1O75717 1129 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-205ENST00000357568 PTPAQ15257 358 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 WHAMMP3Q1A5X7 153 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 DBNDD2Q9BQY9 259 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 ANKZF1Q9H8Y5 726 aa12.15□□□□□ -0.46
CAPN3-205ENST00000357568 MYH14Q7Z406 1995 aaKnown RBP12.15□□□□□ -0.46
CAPN3-205ENST00000357568 RNF113AO15541 343 aaKnown RBP12.14□□□□□ -0.47
CAPN3-205ENST00000357568 CDKL5O76039 1030 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
CAPN3-205ENST00000357568 FOSBP53539 338 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 INTS5Q6P9B9 1019 aaKnown RBP12.14□□□□□ -0.47
CAPN3-205ENST00000357568 C10orf67Q8IYJ2 551 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 PPM1EQ8WY54 764 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 FANCLQ9NW38 375 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 KIF5CO60282 957 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 RPS6KA4O75676 772 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 ERCC5P28715 1186 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-205ENST00000357568 EPHA10Q5JZY3 1008 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 SHC4Q6S5L8 630 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 MB21D2Q8IYB1 491 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-205ENST00000357568 CCDC12Q8WUD4 166 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-205ENST00000357568 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 STK32BQ9NY57 414 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 LCMT1Q9UIC8 334 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 HPS5Q9UPZ3 1129 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 MAST3O60307 1309 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 ZFYP08048 801 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-205ENST00000357568 MCM3P25205 808 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 IL6STP40189 918 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-205ENST00000357568 CORO7P57737 925 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 WDR93Q6P2C0 686 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 TOGARAM2Q6ZUX3 1019 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms