RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 KIAA1211Q6ZU35 1233 aa19.09■□□□□ 0.65
FDPS-201ENST00000356657 ZNF341Q9BYN7 854 aa19.09■□□□□ 0.65
FDPS-201ENST00000356657 ZNF287Q9HBT7 754 aa19.09■□□□□ 0.65
FDPS-201ENST00000356657 EPB41L4AQ9HCS5 686 aaPredicted RBP19.09■□□□□ 0.65
FDPS-201ENST00000356657 PALD1Q9ULE6 856 aa19.09■□□□□ 0.65
FDPS-201ENST00000356657 C12orf60Q5U649 245 aa19.08■□□□□ 0.64
FDPS-201ENST00000356657 HHIPL1Q96JK4 782 aa19.08■□□□□ 0.64
FDPS-201ENST00000356657 SWAP70Q9UH65 585 aa19.08■□□□□ 0.64
FDPS-201ENST00000356657 CTNNA3Q9UI47 895 aa19.08■□□□□ 0.64
FDPS-201ENST00000356657 USP17L12C9JPN9 530 aa19.07■□□□□ 0.64
FDPS-201ENST00000356657 USP17L21D6R901 530 aa19.07■□□□□ 0.64
FDPS-201ENST00000356657 EPB41L2O43491 1005 aaKnown RBP19.07■□□□□ 0.64
FDPS-201ENST00000356657 SLC3A2P08195 630 aaKnown RBP19.07■□□□□ 0.64
FDPS-201ENST00000356657 NT5C2P49902 561 aa19.07■□□□□ 0.64
FDPS-201ENST00000356657 PRAMEF18Q5VWM3 479 aa19.07■□□□□ 0.64
FDPS-201ENST00000356657 CST9Q5W186 159 aa19.07■□□□□ 0.64
FDPS-201ENST00000356657 CTR9Q6PD62 1173 aa19.07■□□□□ 0.64
FDPS-201ENST00000356657 CRACR2BQ8N4Y2 399 aaPredicted RBP19.07■□□□□ 0.64
FDPS-201ENST00000356657 DNAJC5GQ8N7S2 189 aa19.07■□□□□ 0.64
FDPS-201ENST00000356657 GINM1Q9NU53 330 aa19.07■□□□□ 0.64
FDPS-201ENST00000356657 SAP30BPQ9UHR5 308 aaKnown RBP19.07■□□□□ 0.64
FDPS-201ENST00000356657 OTOFQ9HC10 1997 aa19.06■□□□□ 0.64
FDPS-201ENST00000356657 FOXP2O15409 715 aa19.06■□□□□ 0.64
FDPS-201ENST00000356657 PAXIP1Q6ZW49 1069 aaPredicted RBP19.06■□□□□ 0.64
FDPS-201ENST00000356657 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.06■□□□□ 0.64
FDPS-201ENST00000356657 REC8O95072 547 aa19.05■□□□□ 0.64
FDPS-201ENST00000356657 PCP11498 1178 aaKnown RBP19.05■□□□□ 0.64
FDPS-201ENST00000356657 GABPAQ06546 454 aa19.05■□□□□ 0.64
FDPS-201ENST00000356657 TTLL12Q14166 644 aaPredicted RBP19.05■□□□□ 0.64
FDPS-201ENST00000356657 VPS53Q5VIR6 699 aa19.05■□□□□ 0.64
FDPS-201ENST00000356657 CDAN1Q8IWY9 1227 aa19.05■□□□□ 0.64
FDPS-201ENST00000356657 ANKRD13AQ8IZ07 590 aa19.05■□□□□ 0.64
FDPS-201ENST00000356657 ZNF112Q9UJU3 913 aa19.05■□□□□ 0.64
FDPS-201ENST00000356657 ANAPC4Q9UJX5 808 aa19.05■□□□□ 0.64
FDPS-201ENST00000356657 FGAP02671 866 aa19.04■□□□□ 0.64
FDPS-201ENST00000356657 SAPCD2Q86UD0 394 aa19.04■□□□□ 0.64
FDPS-201ENST00000356657 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.04■□□□□ 0.642e-21■□□□□ 10
FDPS-201ENST00000356657 ANGEL1Q9UNK9 670 aaKnown RBP19.04■□□□□ 0.64
FDPS-201ENST00000356657 TLL2Q9Y6L7 1015 aa19.04■□□□□ 0.64
FDPS-201ENST00000356657 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
FDPS-201ENST00000356657 DOCK1Q14185 1865 aa19.04■□□□□ 0.64
FDPS-201ENST00000356657 USP2O75604 605 aaPredicted RBP19.03■□□□□ 0.64
FDPS-201ENST00000356657 PLCD1P51178 756 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 LDLRAD1Q5T700 205 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 DLK2Q6UY11 383 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 C16orf86Q6ZW13 317 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 IL25Q9H293 177 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 CSADQ9Y600 493 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 CTNND1O60716 968 aaKnown RBP19.03■□□□□ 0.64
FDPS-201ENST00000356657 MAP3K9P80192 1104 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 PDE4BQ07343 736 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 PPARAQ07869 468 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 GRM1Q13255 1194 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 NOL9Q5SY16 702 aaKnown RBP19.03■□□□□ 0.64
FDPS-201ENST00000356657 TATDN1Q6P1N9 297 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 MIGA2Q7L4E1 593 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 MAP4K1Q92918 833 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 WRNIP1Q96S55 665 aa19.03■□□□□ 0.64
FDPS-201ENST00000356657 ATAD5Q96QE3 1844 aa19.02■□□□□ 0.64
FDPS-201ENST00000356657 MINDY4BA8MYZ0 360 aa19.02■□□□□ 0.63
FDPS-201ENST00000356657 HUNKP57058 714 aa19.02■□□□□ 0.63
FDPS-201ENST00000356657 IMMTQ16891 758 aaKnown RBP19.02■□□□□ 0.63
FDPS-201ENST00000356657 DEFB115Q30KQ5 88 aa19.02■□□□□ 0.63
FDPS-201ENST00000356657 CCDC17Q96LX7 622 aa19.02■□□□□ 0.63
FDPS-201ENST00000356657 TBC1D2Q9BYX2 928 aa19.02■□□□□ 0.63
FDPS-201ENST00000356657 RNF41Q9H4P4 317 aaPredicted RBP19.02■□□□□ 0.63
FDPS-201ENST00000356657 ANO2Q9NQ90 1003 aa19.02■□□□□ 0.63
FDPS-201ENST00000356657 PHF20L1A8MW92 1017 aa19.01■□□□□ 0.63
FDPS-201ENST00000356657 ZNF213O14771 459 aa19.01■□□□□ 0.63
FDPS-201ENST00000356657 DNAJC18Q9H819 358 aa19.01■□□□□ 0.63
FDPS-201ENST00000356657 ASNSP08243 561 aa19■□□□□ 0.63
FDPS-201ENST00000356657 LSG1Q9H089 658 aaKnown RBP19■□□□□ 0.63
FDPS-201ENST00000356657 RASSF10A6NK89 507 aa18.99■□□□□ 0.63
FDPS-201ENST00000356657 CYP2D6P10635 497 aa18.99■□□□□ 0.63
FDPS-201ENST00000356657 CAP2P40123 477 aa18.99■□□□□ 0.63
FDPS-201ENST00000356657 PRKG1Q13976 671 aa18.99■□□□□ 0.63
FDPS-201ENST00000356657 SCYL3Q8IZE3 742 aa18.99■□□□□ 0.63
FDPS-201ENST00000356657 FGRP09769 529 aa18.98■□□□□ 0.63
FDPS-201ENST00000356657 SHMT1P34896 483 aa18.98■□□□□ 0.63
FDPS-201ENST00000356657 CDK8P49336 464 aa18.98■□□□□ 0.63
FDPS-201ENST00000356657 VGLL4Q14135 290 aa18.98■□□□□ 0.63
FDPS-201ENST00000356657 SLC4A8Q2Y0W8 1093 aa18.98■□□□□ 0.63
FDPS-201ENST00000356657 CERKLQ49MI3 558 aaPredicted RBP18.98■□□□□ 0.63
FDPS-201ENST00000356657 RNF20Q5VTR2 975 aa18.98■□□□□ 0.63
FDPS-201ENST00000356657 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.98■□□□□ 0.63
FDPS-201ENST00000356657 CCDC102AQ96A19 550 aa18.98■□□□□ 0.63
FDPS-201ENST00000356657 MKNK2Q9HBH9 465 aa18.98■□□□□ 0.63
FDPS-201ENST00000356657 PICK1Q9NRD5 415 aa18.98■□□□□ 0.63
FDPS-201ENST00000356657 CYP2D7A0A087X1C5 515 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 UBE2Q2LH0YL09 131 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 ORC4O43929 436 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 VEGFBP49765 207 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 PTH1RQ03431 593 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 PPP4R3BQ5MIZ7 849 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 RGMBQ6NW40 437 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 STAG1Q8WVM7 1258 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 CABP5Q9NP86 173 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 ZBTB48P10074 688 aaPredicted RBP18.97■□□□□ 0.63
FDPS-201ENST00000356657 ECE1P42892 770 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 AKNAD1Q5T1N1 836 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms