RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 PARP10Q53GL7 1025 aa19.16■□□□□ 0.66
PDAP1-201ENST00000350498 TBC1D9BQ66K14 1250 aa19.16■□□□□ 0.66
PDAP1-201ENST00000350498 NYAP1Q6ZVC0 841 aa19.16■□□□□ 0.66
PDAP1-201ENST00000350498 DOCK2Q92608 1830 aa19.16■□□□□ 0.66
PDAP1-201ENST00000350498 ARAP2Q8WZ64 1704 aa19.16■□□□□ 0.66
PDAP1-201ENST00000350498 FAM205CA6NFA0 338 aa19.16■□□□□ 0.66
PDAP1-201ENST00000350498 CAVIN2O95810 425 aa19.16■□□□□ 0.66
PDAP1-201ENST00000350498 CHMP4CQ96CF2 233 aa19.16■□□□□ 0.66
PDAP1-201ENST00000350498 BAZ2BQ9UIF8 2168 aaKnown RBP19.16■□□□□ 0.66
PDAP1-201ENST00000350498 SPATA31A5Q5VU36 1347 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 SPATA31A7Q8IWB4 1347 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 CMA1P23946 247 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 PPARAQ07869 468 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 SSRP1Q08945 709 aaKnown RBP19.15■□□□□ 0.66
PDAP1-201ENST00000350498 FOXP4Q8IVH2 680 aaPredicted RBP19.15■□□□□ 0.66
PDAP1-201ENST00000350498 CCAR2Q8N163 923 aaKnown RBP19.15■□□□□ 0.66
PDAP1-201ENST00000350498 LRRN4CLQ8ND94 238 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 TFCP2L1Q9NZI6 479 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 BCL9LQ86UU0 1499 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 ATP1A3P13637 1013 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 WTAPQ15007 396 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 LONRF3Q496Y0 759 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 TMC6Q7Z403 805 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 AK7Q96M32 723 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 PAXBP1Q9Y5B6 917 aa19.15■□□□□ 0.66
PDAP1-201ENST00000350498 LMOD1P29536 600 aaPredicted RBP19.14■□□□□ 0.65
PDAP1-201ENST00000350498 LIFRP42702 1097 aa19.14■□□□□ 0.65
PDAP1-201ENST00000350498 HSP90AA4PQ58FG1 418 aa19.14■□□□□ 0.65
PDAP1-201ENST00000350498 ARMCX5Q6P1M9 558 aa19.14■□□□□ 0.65
PDAP1-201ENST00000350498 STAG1Q8WVM7 1258 aa19.14■□□□□ 0.65
PDAP1-201ENST00000350498 MINPP1Q9UNW1 487 aa19.14■□□□□ 0.65
PDAP1-201ENST00000350498 BAZ2AQ9UIF9 1905 aaKnown RBP19.14■□□□□ 0.65
PDAP1-201ENST00000350498 SYKP43405 635 aa19.14■□□□□ 0.65
PDAP1-201ENST00000350498 GOLGA8FQ08AF8 430 aa19.14■□□□□ 0.65
PDAP1-201ENST00000350498 GOLGA8DPQ0D2H9 430 aa19.14■□□□□ 0.65
PDAP1-201ENST00000350498 CDKL5O76039 1030 aa19.13■□□□□ 0.65
PDAP1-201ENST00000350498 FMNL1O95466 1100 aaPredicted RBP19.13■□□□□ 0.65
PDAP1-201ENST00000350498 NCAPHQ15003 741 aa19.13■□□□□ 0.65
PDAP1-201ENST00000350498 DIS3L2Q8IYB7 885 aaKnown RBP19.13■□□□□ 0.65
PDAP1-201ENST00000350498 FAM84BQ96KN1 310 aaPredicted RBP19.13■□□□□ 0.65
PDAP1-201ENST00000350498 RTN1Q16799 776 aa19.13■□□□□ 0.65
PDAP1-201ENST00000350498 NOM1Q5C9Z4 860 aaKnown RBP19.13■□□□□ 0.65
PDAP1-201ENST00000350498 E4F1Q66K89 784 aaPredicted RBP19.13■□□□□ 0.65
PDAP1-201ENST00000350498 CPLX2Q6PUV4 134 aaKnown RBP19.13■□□□□ 0.65
PDAP1-201ENST00000350498 ANKRD18AQ8IVF6 992 aa19.13■□□□□ 0.65
PDAP1-201ENST00000350498 CICQ96RK0 1608 aaPredicted RBP19.12■□□□□ 0.65
PDAP1-201ENST00000350498 MYH2Q9UKX2 1941 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 NMT2O60551 498 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 GTF2E1P29083 439 aaPredicted RBP19.12■□□□□ 0.65
PDAP1-201ENST00000350498 ELF2Q15723 593 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 USP49Q70CQ1 688 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 GRAMD1CQ8IYS0 662 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 RIOK1Q9BRS2 568 aaKnown RBP19.12■□□□□ 0.65
PDAP1-201ENST00000350498 HSD3B7Q9H2F3 369 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 PCDHB6Q9Y5E3 794 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 MAGEB6P1A0A0J9YX57 407 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 TRIM29Q14134 588 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 KMT5BQ4FZB7 885 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 EARS2Q5JPH6 523 aaKnown RBP19.12■□□□□ 0.65
PDAP1-201ENST00000350498 TXNRD3Q86VQ6 643 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 METTL16Q86W50 562 aaKnown RBP19.12■□□□□ 0.65
PDAP1-201ENST00000350498 ZNF654Q8IZM8 581 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 NACAP1Q9BZK3 213 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 KRT23Q9C075 422 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 HPSEQ9Y251 543 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 PNPLA7Q6ZV29 1317 aa19.12■□□□□ 0.65
PDAP1-201ENST00000350498 IFNAR1P17181 557 aa19.11■□□□□ 0.65
PDAP1-201ENST00000350498 BCORQ6W2J9 1755 aa19.11■□□□□ 0.65
PDAP1-201ENST00000350498 TNKSO95271 1327 aa19.11■□□□□ 0.65
PDAP1-201ENST00000350498 WNT7AO00755 349 aa19.11■□□□□ 0.65
PDAP1-201ENST00000350498 NOSTRINQ8IVI9 506 aa19.11■□□□□ 0.65
PDAP1-201ENST00000350498 CRACR2BQ8N4Y2 399 aaPredicted RBP19.11■□□□□ 0.65
PDAP1-201ENST00000350498 DPF2Q92785 391 aa19.11■□□□□ 0.65
PDAP1-201ENST00000350498 MMP1P03956 469 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 BMP6P22004 513 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 NLRP12P59046 1061 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 ZRSR1Q15695 479 aaKnown RBP19.1■□□□□ 0.65
PDAP1-201ENST00000350498 FANCBQ8NB91 859 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 CDC5LQ99459 802 aaKnown RBP19.1■□□□□ 0.65
PDAP1-201ENST00000350498 NAT10Q9H0A0 1025 aaKnown RBP19.1■□□□□ 0.65
PDAP1-201ENST00000350498 CNNM2Q9H8M5 875 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 COL22A1Q8NFW1 1626 aaPredicted RBP19.1■□□□□ 0.65
PDAP1-201ENST00000350498 NRAPQ86VF7 1730 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 PLEKHA8P1O95397 391 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 PDE4BQ07343 736 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 PDILTQ8N807 584 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 VPS54Q9P1Q0 977 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 THRAP3Q9Y2W1 955 aaKnown RBP19.1■□□□□ 0.65
PDAP1-201ENST00000350498 ZNF804BA4D1E1 1349 aa19.1■□□□□ 0.65
PDAP1-201ENST00000350498 CYP2D6P10635 497 aa19.09■□□□□ 0.65
PDAP1-201ENST00000350498 VEGFAP15692 232 aaPredicted RBP19.09■□□□□ 0.65
PDAP1-201ENST00000350498 RESP18Q5W5W9 173 aa19.09■□□□□ 0.65
PDAP1-201ENST00000350498 ENAHQ8N8S7 591 aaPredicted RBP19.09■□□□□ 0.65
PDAP1-201ENST00000350498 CDCA7Q9BWT1 371 aaPredicted RBP19.09■□□□□ 0.65
PDAP1-201ENST00000350498 AHDC1Q5TGY3 1603 aaPredicted RBP19.09■□□□□ 0.65
PDAP1-201ENST00000350498 ADAMTS3O15072 1205 aa19.09■□□□□ 0.65
PDAP1-201ENST00000350498 PRR29P0C7W0 189 aa19.09■□□□□ 0.65
PDAP1-201ENST00000350498 SEC23AQ15436 765 aa19.09■□□□□ 0.65
PDAP1-201ENST00000350498 ZNF827Q17R98 1081 aa19.09■□□□□ 0.65
PDAP1-201ENST00000350498 SYT10Q6XYQ8 523 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms