RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 FAM196BA6NMK8 535 aa24.95■■□□□ 1.59
SMARCB1-202ENST00000344921 MCMDC2Q4G0Z9 681 aa24.95■■□□□ 1.59
SMARCB1-202ENST00000344921 CCDC129Q6ZRS4 1044 aa24.95■■□□□ 1.59
SMARCB1-202ENST00000344921 FOXP4Q8IVH2 680 aaPredicted RBP24.95■■□□□ 1.59
SMARCB1-202ENST00000344921 ZKSCAN4Q969J2 545 aaPredicted RBP24.95■■□□□ 1.59
SMARCB1-202ENST00000344921 HERC5Q9UII4 1024 aaKnown RBP24.95■■□□□ 1.59
SMARCB1-202ENST00000344921 UNCXA6NJT0 531 aa24.95■■□□□ 1.58
SMARCB1-202ENST00000344921 TBC1D12O60347 775 aa24.95■■□□□ 1.58
SMARCB1-202ENST00000344921 CWC27Q6UX04 472 aaKnown RBP24.95■■□□□ 1.58
SMARCB1-202ENST00000344921 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.95■■□□□ 1.58
SMARCB1-202ENST00000344921 VGLL4Q14135 290 aa24.94■■□□□ 1.58
SMARCB1-202ENST00000344921 ELP3Q9H9T3 547 aa24.94■■□□□ 1.58
SMARCB1-202ENST00000344921 INPP5BP32019 993 aa24.93■■□□□ 1.58
SMARCB1-202ENST00000344921 MAP3K10Q02779 954 aa24.93■■□□□ 1.58
SMARCB1-202ENST00000344921 BAZ2AQ9UIF9 1905 aaKnown RBP24.93■■□□□ 1.58
SMARCB1-202ENST00000344921 OTOFQ9HC10 1997 aa24.93■■□□□ 1.58
SMARCB1-202ENST00000344921 GSG1L2A8MUP6 293 aa24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 PATL2C9JE40 543 aaKnown RBP24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 PLCD1P51178 756 aa24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 RASAL3Q86YV0 1011 aa24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 NACAP1Q9BZK3 213 aa24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 SERPINB13Q9UIV8 391 aa24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 ZNF112Q9UJU3 913 aa24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 USP17L12C9JPN9 530 aa24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 USP17L21D6R901 530 aa24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 SLC10A3P09131 477 aa24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 TDO2P48775 406 aa24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 MKRN3Q13064 507 aaKnown RBP24.92■■□□□ 1.58
SMARCB1-202ENST00000344921 AOC2O75106 756 aa24.91■■□□□ 1.58
SMARCB1-202ENST00000344921 PHF20L1A8MW92 1017 aa24.9■■□□□ 1.58
SMARCB1-202ENST00000344921 FAM155AB1AL88 458 aaPredicted RBP24.9■■□□□ 1.58
SMARCB1-202ENST00000344921 CYP2D6P10635 497 aa24.9■■□□□ 1.58
SMARCB1-202ENST00000344921 MFAP1P55081 439 aaKnown RBP24.9■■□□□ 1.58
SMARCB1-202ENST00000344921 NOGQ13253 232 aa24.9■■□□□ 1.58
SMARCB1-202ENST00000344921 GIMAP6Q6P9H5 292 aa24.9■■□□□ 1.58
SMARCB1-202ENST00000344921 SIPA1L1O43166 1804 aa24.89■■□□□ 1.58
SMARCB1-202ENST00000344921 CTR9Q6PD62 1173 aa24.89■■□□□ 1.58
SMARCB1-202ENST00000344921 IFNL3Q8IZI9 196 aa24.89■■□□□ 1.58
SMARCB1-202ENST00000344921 EHD4Q9H223 541 aa24.89■■□□□ 1.58
SMARCB1-202ENST00000344921 ARPP21Q9UBL0 812 aaPredicted RBP24.89■■□□□ 1.58
SMARCB1-202ENST00000344921 DDX60LQ5H9U9 1706 aaKnown RBP24.89■■□□□ 1.58
SMARCB1-202ENST00000344921 CYP2D7A0A087X1C5 515 aa24.89■■□□□ 1.57
SMARCB1-202ENST00000344921 CTNND1O60716 968 aaKnown RBP24.89■■□□□ 1.57
SMARCB1-202ENST00000344921 BMP2KLQ5H9B9 411 aa24.89■■□□□ 1.57
SMARCB1-202ENST00000344921 ZNF589Q86UQ0 364 aaPredicted RBP24.89■■□□□ 1.57
SMARCB1-202ENST00000344921 OPTNQ96CV9 577 aa24.89■■□□□ 1.57
SMARCB1-202ENST00000344921 NAPBQ9H115 298 aa24.89■■□□□ 1.57
SMARCB1-202ENST00000344921 PICK1Q9NRD5 415 aa24.89■■□□□ 1.57
SMARCB1-202ENST00000344921 SNCAIPQ9Y6H5 919 aa24.89■■□□□ 1.57
SMARCB1-202ENST00000344921 CCDC171Q6TFL3 1326 aa24.89■■□□□ 1.57
SMARCB1-202ENST00000344921 MINDY4BA8MYZ0 360 aa24.88■■□□□ 1.57
SMARCB1-202ENST00000344921 C12orf60Q5U649 245 aa24.88■■□□□ 1.57
SMARCB1-202ENST00000344921 METTL16Q86W50 562 aaKnown RBP24.88■■□□□ 1.57
SMARCB1-202ENST00000344921 DNAJC18Q9H819 358 aa24.88■■□□□ 1.57
SMARCB1-202ENST00000344921 EPB41L4AQ9HCS5 686 aaPredicted RBP24.88■■□□□ 1.57
SMARCB1-202ENST00000344921 EVX2Q03828 476 aa24.87■■□□□ 1.57
SMARCB1-202ENST00000344921 VPS53Q5VIR6 699 aa24.87■■□□□ 1.57
SMARCB1-202ENST00000344921 SPRYD7Q5W111 196 aa24.87■■□□□ 1.57
SMARCB1-202ENST00000344921 SCYL3Q8IZE3 742 aa24.87■■□□□ 1.57
SMARCB1-202ENST00000344921 RUFY2Q8WXA3 655 aa24.87■■□□□ 1.57
SMARCB1-202ENST00000344921 OTUD5Q96G74 571 aa24.87■■□□□ 1.57
SMARCB1-202ENST00000344921 WNK4Q96J92 1243 aa24.87■■□□□ 1.57
SMARCB1-202ENST00000344921 CHMLP26374 656 aa24.86■■□□□ 1.57
SMARCB1-202ENST00000344921 MAP2K2P36507 400 aa24.86■■□□□ 1.57
SMARCB1-202ENST00000344921 ERO1BQ86YB8 467 aa24.86■■□□□ 1.57
SMARCB1-202ENST00000344921 CNKSR2Q8WXI2 1034 aa24.86■■□□□ 1.57
SMARCB1-202ENST00000344921 PCNTO95613 3336 aa24.86■■□□□ 1.57
SMARCB1-202ENST00000344921 NOL9Q5SY16 702 aaKnown RBP24.86■■□□□ 1.57
SMARCB1-202ENST00000344921 DYNLL2Q96FJ2 89 aa24.86■■□□□ 1.57
SMARCB1-202ENST00000344921 ZBTB48P10074 688 aaPredicted RBP24.85■■□□□ 1.57
SMARCB1-202ENST00000344921 CAP2P40123 477 aa24.85■■□□□ 1.57
SMARCB1-202ENST00000344921 KIF23Q02241 960 aaPredicted RBP24.85■■□□□ 1.57
SMARCB1-202ENST00000344921 SBK1Q52WX2 424 aa24.85■■□□□ 1.57
SMARCB1-202ENST00000344921 STK11IPQ8N1F8 1099 aa24.85■■□□□ 1.57
SMARCB1-202ENST00000344921 ZIC5Q96T25 663 aa24.85■■□□□ 1.57
SMARCB1-202ENST00000344921 SPDYE5A6NIY4 337 aa24.84■■□□□ 1.57
SMARCB1-202ENST00000344921 HSPD1P10809 573 aaKnown RBP24.84■■□□□ 1.57
SMARCB1-202ENST00000344921 GDF11O95390 407 aa24.83■■□□□ 1.57
SMARCB1-202ENST00000344921 GABPAQ06546 454 aa24.83■■□□□ 1.57
SMARCB1-202ENST00000344921 RRP1BQ14684 758 aaKnown RBP24.83■■□□□ 1.57
SMARCB1-202ENST00000344921 CERKLQ49MI3 558 aaPredicted RBP24.83■■□□□ 1.57
SMARCB1-202ENST00000344921 SWAP70Q9UH65 585 aa24.83■■□□□ 1.57
SMARCB1-202ENST00000344921 SMIM22K7EJ46 135 aa24.83■■□□□ 1.57
SMARCB1-202ENST00000344921 GJA5P36382 358 aa24.83■■□□□ 1.57
SMARCB1-202ENST00000344921 PPATQ06203 517 aa24.83■■□□□ 1.57
SMARCB1-202ENST00000344921 TATDN1Q6P1N9 297 aa24.83■■□□□ 1.57
SMARCB1-202ENST00000344921 ZHX2Q9Y6X8 837 aa24.83■■□□□ 1.57
SMARCB1-202ENST00000344921 DOCK1Q14185 1865 aa24.82■■□□□ 1.56
SMARCB1-202ENST00000344921 PTPRAP18433 802 aa24.82■■□□□ 1.56
SMARCB1-202ENST00000344921 SHMT1P34896 483 aa24.82■■□□□ 1.56
SMARCB1-202ENST00000344921 SLC44A5Q8NCS7 719 aa24.82■■□□□ 1.56
SMARCB1-202ENST00000344921 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.82■■□□□ 1.56
SMARCB1-202ENST00000344921 FOXP2O15409 715 aa24.81■■□□□ 1.56
SMARCB1-202ENST00000344921 JMYQ8N9B5 988 aa24.81■■□□□ 1.56
SMARCB1-202ENST00000344921 RAD50Q92878 1312 aa24.81■■□□□ 1.56
SMARCB1-202ENST00000344921 IRF6O14896 467 aa24.81■■□□□ 1.56
SMARCB1-202ENST00000344921 ASNSP08243 561 aa24.81■■□□□ 1.56
SMARCB1-202ENST00000344921 CDK8P49336 464 aa24.81■■□□□ 1.56
SMARCB1-202ENST00000344921 MAP2K1Q02750 393 aaPredicted RBP24.81■■□□□ 1.56
SMARCB1-202ENST00000344921 PPIL2Q13356 520 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms