RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 HUNKP57058 714 aa14.22□□□□□ -0.13
SPTLC1-202ENST00000337841 MAP3K11Q16584 847 aa14.22□□□□□ -0.13
SPTLC1-202ENST00000337841 C12orf60Q5U649 245 aa14.22□□□□□ -0.13
SPTLC1-202ENST00000337841 CTR9Q6PD62 1173 aa14.22□□□□□ -0.13
SPTLC1-202ENST00000337841 ARPP21Q9UBL0 812 aaPredicted RBP14.22□□□□□ -0.13
SPTLC1-202ENST00000337841 SERPINB13Q9UIV8 391 aa14.22□□□□□ -0.13
SPTLC1-202ENST00000337841 DOCK2Q92608 1830 aa14.22□□□□□ -0.13
SPTLC1-202ENST00000337841 COL2A1P02458 1487 aaPredicted RBP14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 SGSM2O43147 1006 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 SLC3A2P08195 630 aaKnown RBP14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 PLCD1P51178 756 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 SLC4A8Q2Y0W8 1093 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 MOB2Q70IA6 237 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 ZNF589Q86UQ0 364 aaPredicted RBP14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 METTL16Q86W50 562 aaKnown RBP14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 ANKRD13AQ8IZ07 590 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 KLRG1Q96E93 195 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 SLC10A4Q96EP9 437 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 EHD4Q9H223 541 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 CTNNA3Q9UI47 895 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 ZNF112Q9UJU3 913 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 TLL2Q9Y6L7 1015 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 MAST2Q6P0Q8 1798 aa14.21□□□□□ -0.13
SPTLC1-202ENST00000337841 FGAP02671 866 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 DEFB115Q30KQ5 88 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 LDLRAD1Q5T700 205 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 VPS53Q5VIR6 699 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 SAPCD2Q86UD0 394 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 HHIPL1Q96JK4 782 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 WRNIP1Q96S55 665 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 ESYT1Q9BSJ8 1104 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 DSCC1Q9BVC3 393 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 ZNF287Q9HBT7 754 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 CSADQ9Y600 493 aa14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 MYO5AQ9Y4I1 1855 aaKnown RBP14.2□□□□□ -0.14
SPTLC1-202ENST00000337841 CTNND1O60716 968 aaKnown RBP14.19□□□□□ -0.14
SPTLC1-202ENST00000337841 CYP2D6P10635 497 aa14.19□□□□□ -0.14
SPTLC1-202ENST00000337841 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
SPTLC1-202ENST00000337841 EPB41L4AQ9HCS5 686 aaPredicted RBP14.19□□□□□ -0.14
SPTLC1-202ENST00000337841 SWAP70Q9UH65 585 aa14.19□□□□□ -0.14
SPTLC1-202ENST00000337841 FZD1Q9UP38 647 aa14.19□□□□□ -0.14
SPTLC1-202ENST00000337841 POLR2AP24928 1970 aaKnown RBP14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 CYP2D7A0A087X1C5 515 aa14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 PHF20L1A8MW92 1017 aa14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 EIF5BO60841 1220 aaKnown RBP14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 CAPN15O75808 1086 aa14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 ZNF157P51786 506 aaPredicted RBP14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 RGMBQ6NW40 437 aa14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 PAXIP1Q6ZW49 1069 aaPredicted RBP14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 MKNK2Q9HBH9 465 aa14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.18□□□□□ -0.14
SPTLC1-202ENST00000337841 FAM196BA6NMK8 535 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 ZNF213O14771 459 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 FOXP2O15409 715 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 CAP2P40123 477 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 ECE1P42892 770 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 CDK8P49336 464 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 GABPAQ06546 454 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 PDE4BQ07343 736 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 PPARAQ07869 468 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 CERKLQ49MI3 558 aaPredicted RBP14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 TATDN1Q6P1N9 297 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 ZKSCAN4Q969J2 545 aaPredicted RBP14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 DYNLL2Q96FJ2 89 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 CCDC17Q96LX7 622 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 CABP5Q9NP86 173 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 PICK1Q9NRD5 415 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 GINM1Q9NU53 330 aa14.17□□□□□ -0.14
SPTLC1-202ENST00000337841 RASSF10A6NK89 507 aa14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 SLURP2P0DP57 97 aa14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 INPP5BP32019 993 aa14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 IMMTQ16891 758 aaKnown RBP14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 C16orf86Q6ZW13 317 aa14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 SCYL3Q8IZE3 742 aa14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 ZNF444Q8N0Y2 327 aaPredicted RBP14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 MAP4K1Q92918 833 aa14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 IL25Q9H293 177 aa14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 ANO2Q9NQ90 1003 aa14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 ANAPC4Q9UJX5 808 aa14.16□□□□□ -0.14
SPTLC1-202ENST00000337841 ZMYM6O95789 1325 aa14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 ECM29Q5VYK3 1845 aa14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 SSC5DA1L4H1 1573 aa14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 REC8O95072 547 aa14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 PTH1RQ03431 593 aa14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 VGLL4Q14135 290 aa14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 NOL9Q5SY16 702 aaKnown RBP14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 ERO1BQ86YB8 467 aa14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 STK11IPQ8N1F8 1099 aa14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 CLMNQ96JQ2 1002 aa14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 RNF41Q9H4P4 317 aaPredicted RBP14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 ELP3Q9H9T3 547 aa14.15□□□□□ -0.14
SPTLC1-202ENST00000337841 ASNSP08243 561 aa14.14□□□□□ -0.15
SPTLC1-202ENST00000337841 PCP11498 1178 aaKnown RBP14.14□□□□□ -0.15
SPTLC1-202ENST00000337841 SHMT1P34896 483 aa14.14□□□□□ -0.15
SPTLC1-202ENST00000337841 HTRA3P83110 453 aa14.14□□□□□ -0.15
SPTLC1-202ENST00000337841 CTDSPL2Q05D32 466 aa14.14□□□□□ -0.15
SPTLC1-202ENST00000337841 ABCB5Q2M3G0 1257 aa14.14□□□□□ -0.15
SPTLC1-202ENST00000337841 MFSD6Q6ZSS7 791 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms