RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 WASF1Q92558 559 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 XRN1Q8IZH2 1706 aaKnown RBP9.38□□□□□ -0.91
HPS4-201ENST00000336873 RNASE9P60153 205 aaKnown RBP9.38□□□□□ -0.91
HPS4-201ENST00000336873 MRPS25P82663 173 aaKnown RBP9.38□□□□□ -0.91
HPS4-201ENST00000336873 ZNF654Q8IZM8 581 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 CDC5LQ99459 802 aaKnown RBP9.38□□□□□ -0.91
HPS4-201ENST00000336873 MAGEC2Q9UBF1 373 aaPredicted RBP9.38□□□□□ -0.91
HPS4-201ENST00000336873 CHRNDQ07001 517 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 ZNF569Q5MCW4 686 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 BRAPQ7Z569 592 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 TMEM87AQ8NBN3 555 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 BAG1Q99933 345 aaPredicted RBP9.38□□□□□ -0.91
HPS4-201ENST00000336873 UBA5Q9GZZ9 404 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 KAT14Q9H8E8 782 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 TAB2Q9NYJ8 693 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 GNPATO15228 680 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 KRT18P05783 430 aaKnown RBP9.37□□□□□ -0.91
HPS4-201ENST00000336873 GYS2P54840 703 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 LETM2Q2VYF4 491 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 AXDND1Q5T1B0 1012 aaPredicted RBP9.37□□□□□ -0.91
HPS4-201ENST00000336873 KIAA1328Q86T90 577 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 GOLGA6L1Q8N7Z2 621 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 TDRD7Q8NHU6 1098 aaKnown RBP9.37□□□□□ -0.91
HPS4-201ENST00000336873 TEX13AQ9BXU3 409 aaPredicted RBP9.37□□□□□ -0.91
HPS4-201ENST00000336873 KRT23Q9C075 422 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 RNF41Q9H4P4 317 aaPredicted RBP9.37□□□□□ -0.91
HPS4-201ENST00000336873 CTNND2Q9UQB3 1225 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 ADD2P35612 726 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 MAPKAPK5Q8IW41 473 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 ATG3Q9NT62 314 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 COL15A1P39059 1388 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 ELP1O95163 1332 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 PATL2C9JE40 543 aaKnown RBP9.37□□□□□ -0.91
HPS4-201ENST00000336873 TSPY3P0CV98 308 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 TSPY8P0CW00 308 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 IBSPP21815 317 aaPredicted RBP9.37□□□□□ -0.91
HPS4-201ENST00000336873 NLRP12P59046 1061 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 POSTNQ15063 836 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 SOGA3Q5TF21 947 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 SETDB2Q96T68 719 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 CSRNP2Q9H175 543 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 MMRN2Q9H8L6 949 aa9.37□□□□□ -0.91
HPS4-201ENST00000336873 PPP1R1BQ9UD71 204 aaPredicted RBP9.37□□□□□ -0.91
HPS4-201ENST00000336873 PCCAP05165 728 aaPredicted RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 EVCP57679 992 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 HSP90B2PQ58FF3 399 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 DNAJC21Q5F1R6 531 aaKnown RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 TAF3Q5VWG9 929 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 SPTY2D1Q68D10 685 aaPredicted RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 NOSTRINQ8IVI9 506 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 IGSF22Q8N9C0 903 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 FANCBQ8NB91 859 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 NLRP3Q96P20 1036 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 SRP68Q9UHB9 627 aaKnown RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 CRYBG1Q9Y4K1 1723 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 MAP3K15Q6ZN16 1313 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 ZSCAN12O43309 604 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 MYO1BO43795 1136 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 KIF5CO60282 957 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 PLEKHA8P1O95397 391 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 CYP2D6P10635 497 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 BRD2P25440 801 aaKnown RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 ANTXR2P58335 489 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 DIXDC1Q155Q3 683 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 SRRTQ9BXP5 876 aaKnown RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 TMX4Q9H1E5 349 aaPredicted RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 POLD4Q9HCU8 107 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 C3P01024 1663 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 N4BP2Q86UW6 1770 aaPredicted RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 ERVV-2B6SEH9 535 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 TRIM21P19474 475 aaKnown RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 STAT6P42226 847 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 CRKLP46109 303 aaKnown RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 LMAN1P49257 510 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 PPARAQ07869 468 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 NCBP1Q09161 790 aaKnown RBP9.36□□□□□ -0.91
HPS4-201ENST00000336873 JAKMIP3Q5VZ66 844 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 DYNLL2Q96FJ2 89 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 SLF1Q9BQI6 1058 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 RTEL1Q9NZ71 1219 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 TBC1D7Q9P0N9 293 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 DACH1Q9UI36 760 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 CEP131Q9UPN4 1083 aa9.36□□□□□ -0.91
HPS4-201ENST00000336873 WDR17Q8IZU2 1322 aa9.35□□□□□ -0.91
HPS4-201ENST00000336873 MTIF2P46199 727 aaKnown RBP9.35□□□□□ -0.91
HPS4-201ENST00000336873 UBXN1Q04323 297 aa9.35□□□□□ -0.91
HPS4-201ENST00000336873 DYMQ7RTS9 669 aa9.35□□□□□ -0.91
HPS4-201ENST00000336873 FMR1NBQ8N0W7 255 aaPredicted RBP9.35□□□□□ -0.91
HPS4-201ENST00000336873 CCDC150Q8NCX0 1101 aa9.35□□□□□ -0.91
HPS4-201ENST00000336873 TGFBRAP1Q8WUH2 860 aa9.35□□□□□ -0.91
HPS4-201ENST00000336873 ZNF622Q969S3 477 aaKnown RBP eCLIP9.35□□□□□ -0.912e-6■□□□□ 11.1
HPS4-201ENST00000336873 ZCCHC17Q9NP64 241 aaKnown RBP9.35□□□□□ -0.91
HPS4-201ENST00000336873 JADE2Q9NQC1 790 aa9.35□□□□□ -0.91
HPS4-201ENST00000336873 ZNF652Q9Y2D9 606 aa9.35□□□□□ -0.91
HPS4-201ENST00000336873 MON2Q7Z3U7 1717 aa9.35□□□□□ -0.91
HPS4-201ENST00000336873 ENC1O14682 589 aa9.35□□□□□ -0.91
HPS4-201ENST00000336873 EPS15P42566 896 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms