RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 MIGA1Q8NAN2 632 aa18.26■□□□□ 0.51
SMARCD2-202ENST00000323347 FAM84BQ96KN1 310 aaPredicted RBP18.26■□□□□ 0.51
SMARCD2-202ENST00000323347 BCL2L12Q9HB09 334 aa18.26■□□□□ 0.51
SMARCD2-202ENST00000323347 NUTM2BA6NNL0 878 aaPredicted RBP18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 NUTM2EB1AL46 878 aaPredicted RBP18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 CAVIN4Q5BKX8 364 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 NUTM2AQ8IVF1 878 aaPredicted RBP18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 TRIM22Q8IYM9 498 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 PDCL3Q9H2J4 239 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 A0A0G2JS52 829 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 IKBKBO14920 756 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 MARCKSP29966 332 aaPredicted RBP18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 SYKP43405 635 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 GYG1P46976 350 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 LRMPQ12912 555 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 DPCR1Q3MIW9 517 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 LRRC8AQ8IWT6 810 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 FANCBQ8NB91 859 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 ESR2Q92731 530 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 KCND1Q9NSA2 647 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
SMARCD2-202ENST00000323347 GNL2Q13823 731 aaKnown RBP18.24■□□□□ 0.51
SMARCD2-202ENST00000323347 VPS72Q15906 364 aa18.24■□□□□ 0.51
SMARCD2-202ENST00000323347 COL24A1Q17RW2 1714 aa18.24■□□□□ 0.51
SMARCD2-202ENST00000323347 ZNF654Q8IZM8 581 aa18.24■□□□□ 0.51
SMARCD2-202ENST00000323347 NYXQ9GZU5 481 aa18.24■□□□□ 0.51
SMARCD2-202ENST00000323347 IMPACTQ9P2X3 320 aa18.24■□□□□ 0.51
SMARCD2-202ENST00000323347 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
SMARCD2-202ENST00000323347 SMTNL1A8MU46 457 aa18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 IGSF3O75054 1194 aa18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 NCAPHQ15003 741 aa18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 SAFBQ15424 915 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 ERCC4Q92889 916 aaPredicted RBP18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 RNF26Q9BY78 433 aaPredicted RBP18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 OSBPL5Q9H0X9 879 aaPredicted RBP18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 RAI14Q9P0K7 980 aa18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 A0A087WWV3 80 aa18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 RPS6KA4O75676 772 aa18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 GUCY1A2P33402 732 aa18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 TOB1P50616 345 aaPredicted RBP18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 ZRSR1Q15695 479 aaKnown RBP18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 RILPL1Q5EBL4 403 aa18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 MTERF4Q7Z6M4 381 aaKnown RBP18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 ZNF384Q8TF68 577 aa18.23■□□□□ 0.51
SMARCD2-202ENST00000323347 DUOX1Q9NRD9 1551 aa18.22■□□□□ 0.51
SMARCD2-202ENST00000323347 UBE2Q2LH0YL09 131 aa18.22■□□□□ 0.51
SMARCD2-202ENST00000323347 DHX8Q14562 1220 aaKnown RBP18.22■□□□□ 0.51
SMARCD2-202ENST00000323347 TBC1D9BQ66K14 1250 aa18.22■□□□□ 0.51
SMARCD2-202ENST00000323347 DIS3L2Q8IYB7 885 aaKnown RBP18.22■□□□□ 0.51
SMARCD2-202ENST00000323347 ZNF579Q8NAF0 562 aaKnown RBP18.22■□□□□ 0.51
SMARCD2-202ENST00000323347 SDR42E1Q8WUS8 393 aa18.22■□□□□ 0.51
SMARCD2-202ENST00000323347 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
SMARCD2-202ENST00000323347 UBAC1Q9BSL1 405 aa18.22■□□□□ 0.51
SMARCD2-202ENST00000323347 ABCF2Q9UG63 623 aa18.22■□□□□ 0.51
SMARCD2-202ENST00000323347 BTBD18B2RXH4 712 aa18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 PTPREP23469 700 aa18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 GSDMDP57764 484 aa18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 RPS8P62241 208 aaKnown RBP18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 FUT2Q10981 343 aa18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 KRI1Q8N9T8 703 aaKnown RBP18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 ZKSCAN3Q9BRR0 538 aa18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 NOL10Q9BSC4 688 aaKnown RBP18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 ANKRD2Q9GZV1 360 aa18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 MYO1BO43795 1136 aa18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 STK11IPQ8N1F8 1099 aa18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 ZSCAN10Q96SZ4 725 aaPredicted RBP18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 IQSEC3Q9UPP2 1182 aaPredicted RBP18.21■□□□□ 0.51
SMARCD2-202ENST00000323347 DLEC1Q9Y238 1755 aa18.2■□□□□ 0.5
SMARCD2-202ENST00000323347 TNKSO95271 1327 aa18.2■□□□□ 0.5
SMARCD2-202ENST00000323347 WTIPA6NIX2 430 aaPredicted RBP18.2■□□□□ 0.5
SMARCD2-202ENST00000323347 TPM4P67936 248 aa18.2■□□□□ 0.5
SMARCD2-202ENST00000323347 KRBA2Q6ZNG9 492 aa18.2■□□□□ 0.5
SMARCD2-202ENST00000323347 NSUN4Q96CB9 384 aaKnown RBP18.2■□□□□ 0.5
SMARCD2-202ENST00000323347 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
SMARCD2-202ENST00000323347 TOMM22Q9NS69 142 aa18.2■□□□□ 0.5
SMARCD2-202ENST00000323347 FBXO2Q9UK22 296 aaPredicted RBP18.2■□□□□ 0.5
SMARCD2-202ENST00000323347 MINDY4BA8MYZ0 360 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 PRPF3O43395 683 aaKnown RBP18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 ORC4O43929 436 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 MDM2Q00987 491 aaPredicted RBP18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 NLRP3Q96P20 1036 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 KCNH3Q9ULD8 1083 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 IRS2Q9Y4H2 1338 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 CALM1P0DP23 149 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 CALM2P0DP24 149 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 CALM3P0DP25 149 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 NT5C2P49902 561 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 CCZ1BP86790 482 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 CCZ1P86791 482 aaPredicted RBP18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 CHAF1AQ13111 956 aaPredicted RBP18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 FAM98CQ17RN3 349 aaKnown RBP18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 CTR9Q6PD62 1173 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 ENAHQ8N8S7 591 aaPredicted RBP18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 CLIC6Q96NY7 704 aa18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 RBM28Q9NW13 759 aaKnown RBP18.19■□□□□ 0.5
SMARCD2-202ENST00000323347 DYNLL1P63167 89 aaKnown RBP18.18■□□□□ 0.5
SMARCD2-202ENST00000323347 METTL16Q86W50 562 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms