RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 GCLCP48506 637 aaPredicted RBP24.34■■□□□ 1.49
SSNA1-201ENST00000322310 HMGCS2P54868 508 aa24.34■■□□□ 1.49
SSNA1-201ENST00000322310 RHBDL3P58872 404 aa24.34■■□□□ 1.49
SSNA1-201ENST00000322310 GPR153Q6NV75 609 aa24.34■■□□□ 1.49
SSNA1-201ENST00000322310 SLF2Q8IX21 1173 aa24.34■■□□□ 1.49
SSNA1-201ENST00000322310 DDX60LQ5H9U9 1706 aaKnown RBP24.34■■□□□ 1.49
SSNA1-201ENST00000322310 LOC285556D6RIA3 1793 aa24.34■■□□□ 1.49
SSNA1-201ENST00000322310 CUL9Q8IWT3 2517 aa24.33■■□□□ 1.49
SSNA1-201ENST00000322310 TBC1D12O60347 775 aa24.33■■□□□ 1.49
SSNA1-201ENST00000322310 ZNF280CQ8ND82 737 aa24.33■■□□□ 1.49
SSNA1-201ENST00000322310 ZNF384Q8TF68 577 aa24.33■■□□□ 1.49
SSNA1-201ENST00000322310 C11orf49Q9H6J7 331 aa24.33■■□□□ 1.49
SSNA1-201ENST00000322310 ANP32CO43423 234 aa24.32■■□□□ 1.48
SSNA1-201ENST00000322310 TIMM10P62072 90 aa24.32■■□□□ 1.48
SSNA1-201ENST00000322310 MECOMQ03112 1051 aa24.32■■□□□ 1.48
SSNA1-201ENST00000322310 RRP1BQ14684 758 aaKnown RBP24.32■■□□□ 1.48
SSNA1-201ENST00000322310 TRIB2Q92519 343 aa24.32■■□□□ 1.48
SSNA1-201ENST00000322310 ASCC2Q9H1I8 757 aaPredicted RBP24.32■■□□□ 1.48
SSNA1-201ENST00000322310 GPR75-ASB3A0A0A6YYF3 556 aa24.31■■□□□ 1.48
SSNA1-201ENST00000322310 ZBTB22O15209 634 aa24.31■■□□□ 1.48
SSNA1-201ENST00000322310 LRIT3Q3SXY7 679 aa24.31■■□□□ 1.48
SSNA1-201ENST00000322310 SPTY2D1Q68D10 685 aaPredicted RBP24.31■■□□□ 1.48
SSNA1-201ENST00000322310 TDHQ8IZJ6 230 aa24.31■■□□□ 1.48
SSNA1-201ENST00000322310 OSBPL5Q9H0X9 879 aaPredicted RBP24.31■■□□□ 1.48
SSNA1-201ENST00000322310 PDS5AQ29RF7 1337 aaKnown RBP24.31■■□□□ 1.48
SSNA1-201ENST00000322310 PEX10O60683 326 aa24.3■■□□□ 1.48
SSNA1-201ENST00000322310 PABPC4Q13310 644 aaKnown RBP eCLIP24.3■■□□□ 1.485e-9■■■■□ 24.9
SSNA1-201ENST00000322310 MTMR10Q9NXD2 777 aa24.3■■□□□ 1.48
SSNA1-201ENST00000322310 OGDHLQ9ULD0 1010 aa24.3■■□□□ 1.48
SSNA1-201ENST00000322310 STXBP5LQ9Y2K9 1186 aa24.3■■□□□ 1.48
SSNA1-201ENST00000322310 UNC80Q8N2C7 3258 aa24.3■■□□□ 1.48
SSNA1-201ENST00000322310 PLXNB2O15031 1838 aa24.29■■□□□ 1.48
SSNA1-201ENST00000322310 CYP2B6P20813 491 aa24.29■■□□□ 1.48
SSNA1-201ENST00000322310 PFASO15067 1338 aa24.29■■□□□ 1.48
SSNA1-201ENST00000322310 CAP2P40123 477 aa24.28■■□□□ 1.48
SSNA1-201ENST00000322310 ERICH6Q7L0X2 663 aa24.28■■□□□ 1.48
SSNA1-201ENST00000322310 UBE2OQ9C0C9 1292 aaKnown RBP24.28■■□□□ 1.48
SSNA1-201ENST00000322310 ATAD5Q96QE3 1844 aa24.27■■□□□ 1.48
SSNA1-201ENST00000322310 USP17L5A8MUK1 530 aa24.27■■□□□ 1.48
SSNA1-201ENST00000322310 NPM3O75607 178 aaKnown RBP24.27■■□□□ 1.48
SSNA1-201ENST00000322310 PRKAR2AP13861 404 aaKnown RBP24.27■■□□□ 1.48
SSNA1-201ENST00000322310 MAP3K21Q5TCX8 1036 aa24.27■■□□□ 1.48
SSNA1-201ENST00000322310 XAGE2Q96GT9 111 aa24.27■■□□□ 1.48
SSNA1-201ENST00000322310 COPRSQ9NQ92 184 aa24.27■■□□□ 1.48
SSNA1-201ENST00000322310 MORF4L1Q9UBU8 362 aa24.27■■□□□ 1.48
SSNA1-201ENST00000322310 A0A1B0GUL7 405 aa24.26■■□□□ 1.47
SSNA1-201ENST00000322310 SH3D19Q5HYK7 790 aa24.26■■□□□ 1.47
SSNA1-201ENST00000322310 PI16Q6UXB8 463 aa24.26■■□□□ 1.47
SSNA1-201ENST00000322310 TBC1D2Q9BYX2 928 aa24.26■■□□□ 1.47
SSNA1-201ENST00000322310 SMC4Q9NTJ3 1288 aa24.26■■□□□ 1.47
SSNA1-201ENST00000322310 MTMR2Q13614 643 aa24.25■■□□□ 1.47
SSNA1-201ENST00000322310 TBC1D9Q6ZT07 1266 aa24.25■■□□□ 1.47
SSNA1-201ENST00000322310 TXNRD2Q9NNW7 524 aa24.25■■□□□ 1.47
SSNA1-201ENST00000322310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.25■■□□□ 1.47
SSNA1-201ENST00000322310 COL2A1P02458 1487 aaPredicted RBP24.25■■□□□ 1.47
SSNA1-201ENST00000322310 E9PSI1 815 aa24.24■■□□□ 1.47
SSNA1-201ENST00000322310 IRX3P78415 501 aaPredicted RBP24.24■■□□□ 1.47
SSNA1-201ENST00000322310 TFCP2Q12800 502 aa24.24■■□□□ 1.47
SSNA1-201ENST00000322310 NSUN4Q96CB9 384 aaKnown RBP24.24■■□□□ 1.47
SSNA1-201ENST00000322310 P2RX7Q99572 595 aaKnown RBP24.24■■□□□ 1.47
SSNA1-201ENST00000322310 HMG20BQ9P0W2 317 aa24.24■■□□□ 1.47
SSNA1-201ENST00000322310 MVPQ14764 893 aaKnown RBP24.23■■□□□ 1.47
SSNA1-201ENST00000322310 ALDH1L2Q3SY69 923 aa24.23■■□□□ 1.47
SSNA1-201ENST00000322310 NUDT12Q9BQG2 462 aa24.23■■□□□ 1.47
SSNA1-201ENST00000322310 AS3MTQ9HBK9 375 aa24.23■■□□□ 1.47
SSNA1-201ENST00000322310 COL6A1P12109 1028 aa24.22■■□□□ 1.47
SSNA1-201ENST00000322310 JAG1P78504 1218 aa24.22■■□□□ 1.47
SSNA1-201ENST00000322310 CACNB2Q08289 660 aaPredicted RBP24.22■■□□□ 1.47
SSNA1-201ENST00000322310 TEX11Q8IYF3 940 aa24.22■■□□□ 1.47
SSNA1-201ENST00000322310 MEIS3Q99687 375 aa24.22■■□□□ 1.47
SSNA1-201ENST00000322310 LDHCP07864 332 aa24.21■■□□□ 1.47
SSNA1-201ENST00000322310 XRCC5P13010 732 aaKnown RBP24.21■■□□□ 1.47
SSNA1-201ENST00000322310 CCND3P30281 292 aaPredicted RBP24.21■■□□□ 1.47
SSNA1-201ENST00000322310 BACE1P56817 501 aa24.21■■□□□ 1.47
SSNA1-201ENST00000322310 HERVK_113P62684 666 aa24.21■■□□□ 1.47
SSNA1-201ENST00000322310 GSTO1P78417 241 aa24.21■■□□□ 1.47
SSNA1-201ENST00000322310 MDM2Q00987 491 aaPredicted RBP24.21■■□□□ 1.47
SSNA1-201ENST00000322310 LRRC26Q2I0M4 334 aa24.21■■□□□ 1.47
SSNA1-201ENST00000322310 SHROOM1Q2M3G4 852 aaPredicted RBP24.21■■□□□ 1.47
SSNA1-201ENST00000322310 SPATA5Q8NB90 893 aa24.21■■□□□ 1.47
SSNA1-201ENST00000322310 SOCS4Q8WXH5 440 aa24.21■■□□□ 1.47
SSNA1-201ENST00000322310 NEUROD6Q96NK8 337 aa24.21■■□□□ 1.47
SSNA1-201ENST00000322310 RAI14Q9P0K7 980 aa24.21■■□□□ 1.47
SSNA1-201ENST00000322310 HERC5Q9UII4 1024 aaKnown RBP24.21■■□□□ 1.47
SSNA1-201ENST00000322310 AKAP2Q9Y2D5 859 aa24.21■■□□□ 1.47
SSNA1-201ENST00000322310 MAP4K4O95819 1239 aaPredicted RBP24.2■■□□□ 1.46
SSNA1-201ENST00000322310 ZKSCAN1P17029 563 aaPredicted RBP24.2■■□□□ 1.46
SSNA1-201ENST00000322310 HOXA7P31268 230 aaPredicted RBP24.2■■□□□ 1.46
SSNA1-201ENST00000322310 CCL14Q16627 93 aa24.2■■□□□ 1.46
SSNA1-201ENST00000322310 GPRC5AQ8NFJ5 357 aa24.2■■□□□ 1.46
SSNA1-201ENST00000322310 SH3RF3Q8TEJ3 882 aaPredicted RBP24.2■■□□□ 1.46
SSNA1-201ENST00000322310 WDR18Q9BV38 432 aa24.2■■□□□ 1.46
SSNA1-201ENST00000322310 COL25A1Q9BXS0 654 aaPredicted RBP24.2■■□□□ 1.46
SSNA1-201ENST00000322310 TMOD4Q9NZQ9 345 aa24.2■■□□□ 1.46
SSNA1-201ENST00000322310 SLFN5Q08AF3 891 aa24.19■■□□□ 1.46
SSNA1-201ENST00000322310 LHX8Q68G74 356 aa24.19■■□□□ 1.46
SSNA1-201ENST00000322310 PORCNQ9H237 461 aa24.19■■□□□ 1.46
SSNA1-201ENST00000322310 RBPJLQ9UBG7 517 aa24.19■■□□□ 1.46
SSNA1-201ENST00000322310 NOB1Q9ULX3 412 aaKnown RBP24.19■■□□□ 1.46
SSNA1-201ENST00000322310 SIPA1L1O43166 1804 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms