RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ADRA2BP18089 450 aa16.69■□□□□ 0.26
PTPN9-201ENST00000306726 BAG1Q99933 345 aaPredicted RBP16.69■□□□□ 0.26
PTPN9-201ENST00000306726 SUGCTQ9HAC7 445 aa16.69■□□□□ 0.26
PTPN9-201ENST00000306726 CTIFO43310 598 aaKnown RBP16.69■□□□□ 0.26
PTPN9-201ENST00000306726 RAD21O60216 631 aa16.69■□□□□ 0.26
PTPN9-201ENST00000306726 NR5A1Q13285 461 aa16.69■□□□□ 0.26
PTPN9-201ENST00000306726 IFIT5Q13325 482 aaKnown RBP16.69■□□□□ 0.26
PTPN9-201ENST00000306726 WDR24Q96S15 920 aa16.69■□□□□ 0.26
PTPN9-201ENST00000306726 VPS16Q9H269 839 aa16.69■□□□□ 0.26
PTPN9-201ENST00000306726 BLZF1Q9H2G9 400 aa16.69■□□□□ 0.26
PTPN9-201ENST00000306726 POLD4Q9HCU8 107 aa16.69■□□□□ 0.26
PTPN9-201ENST00000306726 ZNF609O15014 1411 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 ZBTB43O43298 467 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 SLFN14P0C7P3 912 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 FDPSP14324 419 aaKnown RBP16.68■□□□□ 0.26
PTPN9-201ENST00000306726 BAG6P46379 1132 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 ETF1P62495 437 aaKnown RBP16.68■□□□□ 0.26
PTPN9-201ENST00000306726 MYL5Q02045 173 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 GPS2Q13227 327 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 UTP14CQ5TAP6 766 aaKnown RBP16.68■□□□□ 0.26
PTPN9-201ENST00000306726 PLBD2Q8NHP8 589 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 SERTAD1Q9UHV2 236 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 ERICH2A1L162 156 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
PTPN9-201ENST00000306726 GRIN1Q05586 938 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 SF3A3Q12874 501 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTPN9-201ENST00000306726 AXDND1Q5T1B0 1012 aaPredicted RBP16.68■□□□□ 0.26
PTPN9-201ENST00000306726 ADALQ6DHV7 355 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 BICDL1Q6ZP65 573 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 CCDC150Q8NCX0 1101 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 CAGE1Q8TC20 777 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 RSPH14Q9UHP6 348 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 NAP1L1P55209 391 aaKnown RBP16.68■□□□□ 0.26
PTPN9-201ENST00000306726 PPP2R3AQ06190 1150 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 PDIA6Q15084 440 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 JMYQ8N9B5 988 aa16.68■□□□□ 0.26
PTPN9-201ENST00000306726 A0A0U1RQJ8 604 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 PNMA6AP0CW24 399 aaPredicted RBP16.67■□□□□ 0.26
PTPN9-201ENST00000306726 KCTD19Q17RG1 926 aaPredicted RBP16.67■□□□□ 0.26
PTPN9-201ENST00000306726 HSP90B2PQ58FF3 399 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 TOGARAM2Q6ZUX3 1019 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 ATRIPQ8WXE1 791 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 HAUS7Q99871 368 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 ARFGAP3Q9NP61 516 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 COL15A1P39059 1388 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 ERVV-1B6SEH8 477 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 FBXO18Q8NFZ0 1043 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 NUP88Q99567 741 aaPredicted RBP16.67■□□□□ 0.26
PTPN9-201ENST00000306726 ARMT1Q9H993 441 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 GUCA1BQ9UMX6 200 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 APBA3O96018 575 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 FMR1NBQ8N0W7 255 aaPredicted RBP16.67■□□□□ 0.26
PTPN9-201ENST00000306726 FLAD1Q8NFF5 587 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 LRP2BPQ9P2M1 347 aa16.67■□□□□ 0.26
PTPN9-201ENST00000306726 CRKLP46109 303 aaKnown RBP16.66■□□□□ 0.26
PTPN9-201ENST00000306726 USP49Q70CQ1 688 aa16.66■□□□□ 0.26
PTPN9-201ENST00000306726 CCDC24Q8N4L8 307 aa16.66■□□□□ 0.26
PTPN9-201ENST00000306726 GOLGA6L1Q8N7Z2 621 aa16.66■□□□□ 0.26
PTPN9-201ENST00000306726 SMARCE1Q969G3 411 aa16.66■□□□□ 0.26
PTPN9-201ENST00000306726 ZNF652Q9Y2D9 606 aa16.66■□□□□ 0.26
PTPN9-201ENST00000306726 SOWAHDA6NJG2 315 aa16.66■□□□□ 0.26
PTPN9-201ENST00000306726 EPB41L2O43491 1005 aaKnown RBP16.66■□□□□ 0.26
PTPN9-201ENST00000306726 GTF2E1P29083 439 aaPredicted RBP16.66■□□□□ 0.26
PTPN9-201ENST00000306726 NLRP12P59046 1061 aa16.66■□□□□ 0.26
PTPN9-201ENST00000306726 ZNF174Q15697 407 aa16.66■□□□□ 0.26
PTPN9-201ENST00000306726 JAKMIP3Q5VZ66 844 aa16.66■□□□□ 0.26
PTPN9-201ENST00000306726 TRMT112Q9UI30 125 aaKnown RBP16.66■□□□□ 0.26
PTPN9-201ENST00000306726 TFR2Q9UP52 801 aa16.66■□□□□ 0.26
PTPN9-201ENST00000306726 ENC1O14682 589 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 FAM182BQ5T319 152 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 NAA16Q6N069 864 aaPredicted RBP16.65■□□□□ 0.26
PTPN9-201ENST00000306726 NBPF11Q86T75 865 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 ZNF446Q9NWS9 450 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 HOOK1Q9UJC3 728 aaKnown RBP16.65■□□□□ 0.26
PTPN9-201ENST00000306726 EYA2O00167 538 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 ZSCAN12O43309 604 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 PRKAB2O43741 272 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 RPS6KA4O75676 772 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 SLC4A9Q96Q91 983 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 PPP2R2CQ9Y2T4 447 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 CBFA2T2O43439 604 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 CAPN2P17655 700 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 AK7Q96M32 723 aa16.65■□□□□ 0.26
PTPN9-201ENST00000306726 SMC1AQ14683 1233 aaKnown RBP16.64■□□□□ 0.25
PTPN9-201ENST00000306726 TRIM22Q8IYM9 498 aa16.64■□□□□ 0.25
PTPN9-201ENST00000306726 C4BP0C0L5 1744 aa16.64■□□□□ 0.25
PTPN9-201ENST00000306726 PDE4BQ07343 736 aa16.64■□□□□ 0.25
PTPN9-201ENST00000306726 SSRP1Q08945 709 aaKnown RBP16.64■□□□□ 0.25
PTPN9-201ENST00000306726 ITPK1Q13572 414 aa16.64■□□□□ 0.25
PTPN9-201ENST00000306726 TTC19Q6DKK2 380 aaPredicted RBP16.64■□□□□ 0.25
PTPN9-201ENST00000306726 DIS3L2Q8IYB7 885 aaKnown RBP16.64■□□□□ 0.25
PTPN9-201ENST00000306726 MAGEB6Q8N7X4 407 aa16.64■□□□□ 0.25
PTPN9-201ENST00000306726 TAF1LQ8IZX4 1826 aa16.64■□□□□ 0.25
PTPN9-201ENST00000306726 ZPR1O75312 459 aa16.64■□□□□ 0.25
PTPN9-201ENST00000306726 PRR29P0C7W0 189 aa16.64■□□□□ 0.25
PTPN9-201ENST00000306726 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
PTPN9-201ENST00000306726 CALCOCO1Q9P1Z2 691 aa16.64■□□□□ 0.25
PTPN9-201ENST00000306726 TRIM66O15016 1216 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 N4BP3O15049 544 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms