RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 SYNRGQ9UMZ2 1314 aa14.84□□□□□ -0.03
TRIM56-201ENST00000306085 HMGB2P26583 209 aaKnown RBP14.83□□□□□ -0.03
TRIM56-201ENST00000306085 ESRRGP62508 458 aa14.83□□□□□ -0.03
TRIM56-201ENST00000306085 SCINQ9Y6U3 715 aa14.83□□□□□ -0.03
TRIM56-201ENST00000306085 CYP7A1P22680 504 aa14.83□□□□□ -0.03
TRIM56-201ENST00000306085 SSH1Q8WYL5 1049 aa14.83□□□□□ -0.03
TRIM56-201ENST00000306085 MYOM3Q5VTT5 1437 aa14.83□□□□□ -0.03
TRIM56-201ENST00000306085 CEP104O60308 925 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 CALML3P27482 149 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 CYB5RLQ6IPT4 315 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 USHBP1Q8N6Y0 703 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 CCDC138Q96M89 665 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
TRIM56-201ENST00000306085 RTL9Q8NET4 1388 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 SBNO2Q9Y2G9 1366 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 HELLSQ9NRZ9 838 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 GIMAP4Q9NUV9 329 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 VWA3AA6NCI4 1184 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 CROCCP2Q86T23 111 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 RPSAP08865 295 aaKnown RBP14.83□□□□□ -0.04
TRIM56-201ENST00000306085 GPIHBP1Q8IV16 184 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 RIOK1Q9BRS2 568 aaKnown RBP14.83□□□□□ -0.04
TRIM56-201ENST00000306085 GINS2Q9Y248 185 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 ANO3Q9BYT9 981 aa14.83□□□□□ -0.04
TRIM56-201ENST00000306085 TRAF1Q13077 416 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 P3H4Q92791 437 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 ZBTB24O43167 697 aaPredicted RBP14.82□□□□□ -0.04
TRIM56-201ENST00000306085 WBP4O75554 376 aaKnown RBP14.82□□□□□ -0.04
TRIM56-201ENST00000306085 TMTC2Q8N394 836 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 PHBP35232 272 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 GNAQP50148 359 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 ST5P78524 1137 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 LDHAL6AQ6ZMR3 332 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 ERBINQ96RT1 1412 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 SLC4A1P02730 911 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 BRD3Q15059 726 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 ANKRD20A4Q4UJ75 823 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 ANKRD20A8PQ5CZ79 823 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 ANKRD20A2Q5SQ80 823 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 ANKRD20A1Q5TYW2 823 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 CWF19L2Q2TBE0 894 aaKnown RBP14.82□□□□□ -0.04
TRIM56-201ENST00000306085 OLA1Q9NTK5 396 aaKnown RBP14.82□□□□□ -0.04
TRIM56-201ENST00000306085 PALM2Q8IXS6 379 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 TRIM55Q9BYV6 548 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 ZBTB3Q9H5J0 574 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 IQSEC3Q9UPP2 1182 aaPredicted RBP14.82□□□□□ -0.04
TRIM56-201ENST00000306085 ATP1A2P50993 1020 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 VEZTQ9HBM0 779 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 AMOTL2Q9Y2J4 779 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 FOXD4Q12950 439 aaPredicted RBP14.82□□□□□ -0.04
TRIM56-201ENST00000306085 NRBF2Q96F24 287 aa14.82□□□□□ -0.04
TRIM56-201ENST00000306085 ZNF692Q9BU19 519 aaPredicted RBP14.82□□□□□ -0.04
TRIM56-201ENST00000306085 GTPBP10A4D1E9 387 aaKnown RBP14.81□□□□□ -0.04
TRIM56-201ENST00000306085 SLC12A1Q13621 1099 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 SMYD2Q9NRG4 433 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 RCN2Q14257 317 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 SECISBP2LQ93073 1101 aaKnown RBP14.81□□□□□ -0.04
TRIM56-201ENST00000306085 VPS16Q9H269 839 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 CARD10Q9BWT7 1032 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 ATP5J2-PTCD1G3V325 749 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 ITKQ08881 620 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 KRT81Q14533 505 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 ZSCAN26Q16670 478 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 PDE6AP16499 860 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 RMDN2Q96LZ7 410 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 F13A1P00488 732 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 NOD1Q9Y239 953 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 NSD3Q9BZ95 1437 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 GSTA4O15217 222 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 SART1O43290 800 aaKnown RBP14.81□□□□□ -0.04
TRIM56-201ENST00000306085 CALUO43852 315 aaPredicted RBP14.81□□□□□ -0.04
TRIM56-201ENST00000306085 C16orf87Q6PH81 154 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 CHST3Q7LGC8 479 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 ARHGEF9O43307 516 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 CFAP221Q4G0U5 840 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 TTC22Q5TAA0 569 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 PEX26Q7Z412 305 aa14.81□□□□□ -0.04
TRIM56-201ENST00000306085 CTNNA1P35221 906 aaKnown RBP14.8□□□□□ -0.04
TRIM56-201ENST00000306085 LIG3P49916 1009 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 USP6NLQ92738 828 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 SPATA17Q96L03 361 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 FGD4Q96M96 766 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 PCYT1AP49585 367 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 STRN3Q13033 797 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 TRIM60Q495X7 471 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 SV2BQ7L1I2 683 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 POLR3CQ9BUI4 534 aaPredicted RBP14.8□□□□□ -0.04
TRIM56-201ENST00000306085 NOP14P78316 857 aaKnown RBP14.8□□□□□ -0.04
TRIM56-201ENST00000306085 JARID2Q92833 1246 aaPredicted RBP14.8□□□□□ -0.04
TRIM56-201ENST00000306085 FAM186BQ8IYM0 893 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 TBC1D8BQ0IIM8 1120 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 TRMT10CQ7L0Y3 403 aaKnown RBP14.8□□□□□ -0.04
TRIM56-201ENST00000306085 C20orf194Q5TEA3 1177 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 OGFOD1Q8N543 542 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 PLEKHH2Q8IVE3 1493 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 TMEM259Q4ZIN3 620 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 SYCE1Q8N0S2 351 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 AK9Q5TCS8 1911 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms