RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 OR8K1Q8NGG5 319 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.3□□□□□ -0.44
PBRM1-201ENST00000296302 ZSWIM6Q9HCJ5 1215 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 SPOPO43791 374 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 CEP104O60308 925 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 CEP85LQ5SZL2 805 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 SYCE1Q8N0S2 351 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 ARHGAP24Q8N264 748 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 MIGA1Q8NAN2 632 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 DSCC1Q9BVC3 393 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 PFKFB1P16118 471 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 RPS6KA1Q15418 735 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 CCDC38Q502W7 563 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 TRIML1Q8N9V2 468 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 ZNF274Q96GC6 653 aaPredicted RBP12.3□□□□□ -0.44
PBRM1-201ENST00000296302 SYCP2Q9BX26 1530 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 A2MP01023 1474 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 CETN3O15182 167 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 MAP7D1Q3KQU3 841 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 LONRF3Q496Y0 759 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 NELFBQ8WX92 580 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 CAPS2Q9BXY5 557 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 MCM9Q9NXL9 1143 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 MAPK8IP1Q9UQF2 711 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 TRMT2AQ8IZ69 625 aaKnown RBP12.29□□□□□ -0.44
PBRM1-201ENST00000296302 IFIH1Q9BYX4 1025 aaKnown RBP12.29□□□□□ -0.44
PBRM1-201ENST00000296302 FRMD4BQ9Y2L6 1034 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 STX10O60499 249 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 PLCG2P16885 1265 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 CMA1P23946 247 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 RNASE9P60153 205 aaKnown RBP12.29□□□□□ -0.44
PBRM1-201ENST00000296302 LETM2Q2VYF4 491 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 KRT71Q3SY84 523 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 PIK3AP1Q6ZUJ8 805 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 KLHL7Q8IXQ5 586 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 ZCRB1Q8TBF4 217 aaKnown RBP12.29□□□□□ -0.44
PBRM1-201ENST00000296302 VCX3BQ9H321 246 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 HAUS4Q9H6D7 363 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 BAIAP2L1Q9UHR4 511 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 DDX41Q9UJV9 622 aaKnown RBP12.29□□□□□ -0.44
PBRM1-201ENST00000296302 APBA1Q02410 837 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 PNOCQ13519 176 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 TRMT44Q8IYL2 757 aaKnown RBP12.29□□□□□ -0.44
PBRM1-201ENST00000296302 CCDC97Q96F63 343 aaPredicted RBP12.29□□□□□ -0.44
PBRM1-201ENST00000296302 ZKSCAN3Q9BRR0 538 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 PPP1R12CQ9BZL4 782 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 TXNDC16Q9P2K2 825 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 PALD1Q9ULE6 856 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 ATP10BO94823 1461 aa12.29□□□□□ -0.44
PBRM1-201ENST00000296302 SLC8A1P32418 973 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 MSANTD4Q8NCY6 345 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 BCAS4Q8TDM0 211 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 USP28Q96RU2 1077 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 METTL22Q9BUU2 404 aaPredicted RBP12.28□□□□□ -0.44
PBRM1-201ENST00000296302 GPAA1O43292 621 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 ERCC5P28715 1186 aaPredicted RBP12.28□□□□□ -0.44
PBRM1-201ENST00000296302 TIMM10P62072 90 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 INF2Q27J81 1249 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 MCUR1Q96AQ8 359 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 RNMTO43148 476 aaKnown RBP12.28□□□□□ -0.44
PBRM1-201ENST00000296302 FLOT1O75955 427 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 ZNF365Q70YC5 407 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 V9GY48 417 aaPredicted RBP12.28□□□□□ -0.44
PBRM1-201ENST00000296302 CFAP157Q5JU67 520 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 HYOU1Q9Y4L1 999 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 USP19O94966 1318 aa12.28□□□□□ -0.44
PBRM1-201ENST00000296302 PFKFB2O60825 505 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 NBPF14Q5TI25 921 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 NBPF6Q5VWK0 638 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 MIPOL1Q8TD10 442 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 KIFAP3Q92845 792 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 PPP1R13BQ96KQ4 1090 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 NBPF4Q96M43 638 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 RAB17Q9H0T7 212 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 DESI2Q9BSY9 194 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 PARP2Q9UGN5 583 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 SERTAD1Q9UHV2 236 aa12.27□□□□□ -0.44
PBRM1-201ENST00000296302 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.27□□□□□ -0.44
PBRM1-201ENST00000296302 IRS4O14654 1257 aaPredicted RBP12.27□□□□□ -0.45
PBRM1-201ENST00000296302 KIF3CO14782 793 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 PARP1P09874 1014 aaKnown RBP12.27□□□□□ -0.45
PBRM1-201ENST00000296302 TCP1P17987 556 aaKnown RBP12.27□□□□□ -0.45
PBRM1-201ENST00000296302 ATP5JP18859 108 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 RASSF2P50749 326 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 BEND3Q5T5X7 828 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 APBB1IPQ7Z5R6 666 aaPredicted RBP12.27□□□□□ -0.45
PBRM1-201ENST00000296302 SRGAP1Q7Z6B7 1085 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 NFATC2IPQ8NCF5 419 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 SSH3Q8TE77 659 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 TRIM31Q9BZY9 425 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 CDC23Q9UJX2 597 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 E7EWF7 191 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 KLHL30Q0D2K2 578 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 SFMBT2Q5VUG0 894 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 PDE11AQ9HCR9 933 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 TPCN1Q9ULQ1 816 aa12.27□□□□□ -0.45
PBRM1-201ENST00000296302 A0A1W2PQ27 194 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms