RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 MB21D2Q8IYB1 491 aaPredicted RBP13.66□□□□□ -0.22
USHBP1-201ENST00000252597 EPSTI1Q96J88 318 aa13.66□□□□□ -0.22
USHBP1-201ENST00000252597 MAN1B1Q9UKM7 699 aa13.66□□□□□ -0.22
USHBP1-201ENST00000252597 JAG2Q9Y219 1238 aa13.66□□□□□ -0.22
USHBP1-201ENST00000252597 PARP3Q9Y6F1 533 aa13.66□□□□□ -0.22
USHBP1-201ENST00000252597 ENC1O14682 589 aa13.66□□□□□ -0.22
USHBP1-201ENST00000252597 N4BP3O15049 544 aa13.66□□□□□ -0.22
USHBP1-201ENST00000252597 H2AFXP16104 143 aaPredicted RBP13.66□□□□□ -0.22
USHBP1-201ENST00000252597 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
USHBP1-201ENST00000252597 MRPL44Q9H9J2 332 aaKnown RBP13.66□□□□□ -0.22
USHBP1-201ENST00000252597 PIH1D3Q9NQM4 214 aaKnown RBP13.66□□□□□ -0.22
USHBP1-201ENST00000252597 GUCA1BQ9UMX6 200 aa13.66□□□□□ -0.22
USHBP1-201ENST00000252597 TFR2Q9UP52 801 aa13.66□□□□□ -0.22
USHBP1-201ENST00000252597 TRPM3Q9HCF6 1732 aaPredicted RBP13.65□□□□□ -0.22
USHBP1-201ENST00000252597 TRIM66O15016 1216 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 TADA3O75528 432 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 TPM1P09493 284 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 CHMP4BP1P59074 171 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 RABL6Q3YEC7 729 aaPredicted RBP13.65□□□□□ -0.22
USHBP1-201ENST00000252597 REXO1L1PQ8IX06 675 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 GOLGA1Q92805 767 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 MED1Q15648 1581 aaPredicted RBP13.65□□□□□ -0.22
USHBP1-201ENST00000252597 NEDD4P46934 1319 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 RGPD5Q99666 1765 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 CCDC175P0C221 793 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 RTN1Q16799 776 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 MFSD6Q6ZSS7 791 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 L2HGDHQ9H9P8 463 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 ZSWIM5Q9P217 1185 aa13.65□□□□□ -0.22
USHBP1-201ENST00000252597 SPATA31A3Q5VYP0 1347 aa13.65□□□□□ -0.23
USHBP1-201ENST00000252597 H7C1W4 665 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 ZSCAN26Q16670 478 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 TRIM65Q6PJ69 517 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 DNAJC10Q8IXB1 793 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.64□□□□□ -0.23
USHBP1-201ENST00000252597 BAZ2BQ9UIF8 2168 aaKnown RBP13.64□□□□□ -0.23
USHBP1-201ENST00000252597 KIF1AQ12756 1690 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 EFCAB8A8MWE9 144 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 SMIM22K7EJ46 135 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 BMP6P22004 513 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 MATR3P43243 847 aaKnown RBP eCLIP13.64□□□□□ -0.23
USHBP1-201ENST00000252597 RBL2Q08999 1139 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 FILIP1LQ4L180 1135 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 RGS22Q8NE09 1264 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 AK7Q96M32 723 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 RSPH14Q9UHP6 348 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 SLC4A4Q9Y6R1 1079 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 N4BP1O75113 896 aaKnown RBP13.64□□□□□ -0.23
USHBP1-201ENST00000252597 GTF2E1P29083 439 aaPredicted RBP13.64□□□□□ -0.23
USHBP1-201ENST00000252597 WTAPQ15007 396 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 CC2D1AQ6P1N0 951 aaPredicted RBP13.64□□□□□ -0.23
USHBP1-201ENST00000252597 LEKR1Q6ZMV7 388 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 SDR42E1Q8WUS8 393 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 CSRNP2Q9H175 543 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 TMEM51Q9NW97 253 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 TAB2Q9NYJ8 693 aa13.64□□□□□ -0.23
USHBP1-201ENST00000252597 TNS3Q68CZ2 1445 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 AKR1B15C9JRZ8 316 aaPredicted RBP13.63□□□□□ -0.23
USHBP1-201ENST00000252597 CASP14P31944 242 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 SART3Q15020 963 aaKnown RBP13.63□□□□□ -0.23
USHBP1-201ENST00000252597 LONRF2Q1L5Z9 754 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 CAGE1Q8TC20 777 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 CTNND2Q9UQB3 1225 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 FAM208AQ9UK61 1670 aaKnown RBP13.63□□□□□ -0.23
USHBP1-201ENST00000252597 ZFYP08048 801 aaPredicted RBP13.63□□□□□ -0.23
USHBP1-201ENST00000252597 RRAGBQ5VZM2 374 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 NOSTRINQ8IVI9 506 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 PSMB7Q99436 277 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 MPHOSPH8Q99549 860 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 INTS13Q9NVM9 706 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 SALL1Q9NSC2 1324 aa13.63□□□□□ -0.23
USHBP1-201ENST00000252597 DNAJC21Q5F1R6 531 aaKnown RBP13.62□□□□□ -0.23
USHBP1-201ENST00000252597 GOLGA6L1Q8N7Z2 621 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 DCCP43146 1447 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 CYP2D7A0A087X1C5 515 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 IKBKBO14920 756 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 ABL1P00519 1130 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 PDE6AP16499 860 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 RAD51AP2Q09MP3 1159 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 SLC35F6Q8N357 371 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 ZCRB1Q8TBF4 217 aaKnown RBP13.62□□□□□ -0.23
USHBP1-201ENST00000252597 ZMYM6O95789 1325 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 FAM170AA1A519 330 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 ANKRD18BA2A2Z9 1011 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 FOXP2O15409 715 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 CUTAO60888 179 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 NCAPH2Q6IBW4 605 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 HSD3B7Q9H2F3 369 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
USHBP1-201ENST00000252597 UBN2Q6ZU65 1347 aa13.62□□□□□ -0.23
USHBP1-201ENST00000252597 TBC1D8O95759 1140 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 CYP2C19P33261 490 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 NUTM2AQ8IVF1 878 aaPredicted RBP13.61□□□□□ -0.23
USHBP1-201ENST00000252597 TC2NQ8N9U0 490 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 SEC31BQ9NQW1 1179 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 SH2B2O14492 632 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms