RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 MAP3K21Q5TCX8 1036 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.26□□□□□ -1.09
MED28-201ENST00000237380 CIB2O75838 187 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 TNNC2P02585 160 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 NONOQ15233 471 aaKnown RBP eCLIP8.26□□□□□ -1.09
MED28-201ENST00000237380 ZSCAN30Q86W11 494 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 TRIM37O94972 964 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 SEPT6Q14141 434 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 TMED8Q6PL24 325 aaPredicted RBP8.26□□□□□ -1.09
MED28-201ENST00000237380 BICRAQ9NZM4 1560 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 URI1O94763 535 aaPredicted RBP8.26□□□□□ -1.09
MED28-201ENST00000237380 SRGAP2BP0DMP2 458 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 IFT81Q8WYA0 676 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 CDK13Q14004 1512 aaKnown RBP8.26□□□□□ -1.09
MED28-201ENST00000237380 KRT3P12035 628 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 MNAT1P51948 309 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 MAGEB6Q8N7X4 407 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 CCDC42Q96M95 316 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 DNM3Q9UQ16 869 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 ZMYM4Q5VZL5 1548 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 CNGA4Q8IV77 575 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 MLXIPQ9HAP2 919 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 AFG3L2Q9Y4W6 797 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 NOS1P29475 1434 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 PPIP5K2O43314 1243 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 PPFIA2O75334 1257 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 UBASH3AP57075 661 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 ARHGEF16Q5VV41 709 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 EFHBQ8N7U6 833 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 ANAPC5Q9UJX4 755 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 KLF18A0A0U1RQI7 1052 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 PI4KAP2A4QPH2 592 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 THAP12O43422 761 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 PDE6AP16499 860 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 SLFN5Q08AF3 891 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 EIF2B5Q13144 721 aaKnown RBP8.26□□□□□ -1.09
MED28-201ENST00000237380 PPP2R5AQ15172 486 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 GALNT17Q6IS24 598 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 PI4KAP1Q8N8J0 262 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 LINS1Q8NG48 757 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 CCDC68Q9H2F9 335 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 CCDC169A6NNP5 214 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 VAV2P52735 878 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 IDI1Q13907 227 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 FCHSD1Q86WN1 690 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 SLC1A4P43007 532 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 RASA3Q14644 834 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 ZSCAN20P17040 1043 aaPredicted RBP8.25□□□□□ -1.09
MED28-201ENST00000237380 SH3BGRP55822 239 aaPredicted RBP8.25□□□□□ -1.09
MED28-201ENST00000237380 BTG4Q9NY30 223 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 SH3TC1Q8TE82 1336 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 ESPNB1AK53 854 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 ATP10AO60312 1499 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 TRAPPC8Q9Y2L5 1435 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 TRIM56Q9BRZ2 755 aaKnown RBP8.25□□□□□ -1.09
MED28-201ENST00000237380 VCX3BQ9H321 246 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 TSKSQ9UJT2 592 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 MAPKBP1O60336 1514 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 S100BP04271 92 aaPredicted RBP8.25□□□□□ -1.09
MED28-201ENST00000237380 TSPOAP1O95153 1857 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 RNF113AO15541 343 aaKnown RBP8.25□□□□□ -1.09
MED28-201ENST00000237380 TTC25Q96NG3 672 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.25□□□□□ -1.09
MED28-201ENST00000237380 UTP11Q9Y3A2 253 aaKnown RBP8.25□□□□□ -1.09
MED28-201ENST00000237380 CAPN9O14815 690 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 IREB2P48200 963 aaKnown RBP8.25□□□□□ -1.09
MED28-201ENST00000237380 CCT2P78371 535 aaKnown RBP8.25□□□□□ -1.09
MED28-201ENST00000237380 PPFIA1Q13136 1202 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 ARHGAP27Q6ZUM4 889 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 NRBP2Q9NSY0 501 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 GCC2Q8IWJ2 1684 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 DEXIO95424 95 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 KRT25Q7Z3Z0 450 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 GIMAP8Q8ND71 665 aaPredicted RBP8.25□□□□□ -1.09
MED28-201ENST00000237380 PLCB1Q9NQ66 1216 aa8.25□□□□□ -1.09
MED28-201ENST00000237380 PSDA5PKW4 1024 aaPredicted RBP8.24□□□□□ -1.09
MED28-201ENST00000237380 RIMBP2O15034 1052 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 GIGYF1O75420 1035 aaPredicted RBP8.24□□□□□ -1.09
MED28-201ENST00000237380 CALCOCO1Q9P1Z2 691 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 ARPP21Q9UBL0 812 aaPredicted RBP8.24□□□□□ -1.09
MED28-201ENST00000237380 COPB2P35606 906 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 CYP26C1Q6V0L0 522 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 P3H4Q92791 437 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 TSPYL2Q9H2G4 693 aaPredicted RBP8.24□□□□□ -1.09
MED28-201ENST00000237380 NKIRAS1Q9NYS0 192 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 CETN3O15182 167 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 FAM47CQ5HY64 1035 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 GRPEL1Q9HAV7 217 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 SOS2Q07890 1332 aaPredicted RBP8.24□□□□□ -1.09
MED28-201ENST00000237380 HADHQ16836 314 aaKnown RBP8.24□□□□□ -1.09
MED28-201ENST00000237380 GPATCH4Q5T3I0 446 aaKnown RBP8.24□□□□□ -1.09
MED28-201ENST00000237380 PDE4DQ08499 809 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 SNW1Q13573 536 aaKnown RBP8.24□□□□□ -1.09
MED28-201ENST00000237380 KIF3CO14782 793 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 ZBTB33Q86T24 672 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 RUNDC3BQ96NL0 473 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 GJB2P29033 226 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 LMBR1LQ6UX01 489 aa8.24□□□□□ -1.09
MED28-201ENST00000237380 DPP9Q86TI2 863 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms